RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 Q5VSD8 79 aa7.57□□□□□ -1.2
TGFB1-204ENST00000600196 KRTAP4-16G5E9R7 235 aaPredicted RBP7.56□□□□□ -1.2
TGFB1-204ENST00000600196 ZNF73O43830 326 aaPredicted RBP7.56□□□□□ -1.2
TGFB1-204ENST00000600196 KRTAP10-4P60372 401 aaPredicted RBP7.56□□□□□ -1.2
TGFB1-204ENST00000600196 SPINK6Q6UWN8 80 aa7.56□□□□□ -1.2
TGFB1-204ENST00000600196 RAB37Q96AX2 223 aa7.56□□□□□ -1.2
TGFB1-204ENST00000600196 PRO1854Q9UHT4 67 aa7.56□□□□□ -1.2
TGFB1-204ENST00000600196 ZNF861PO60384 105 aa7.55□□□□□ -1.2
TGFB1-204ENST00000600196 INAFM2P0DMQ5 153 aa7.55□□□□□ -1.2
TGFB1-204ENST00000600196 VAMP3Q15836 100 aa7.55□□□□□ -1.2
TGFB1-204ENST00000600196 BVES-AS1Q5T3Y7 98 aa7.55□□□□□ -1.2
TGFB1-204ENST00000600196 KRTAP11-1Q8IUC1 163 aa7.55□□□□□ -1.2
TGFB1-204ENST00000600196 HERC2O95714 4834 aa7.55□□□□□ -1.2
TGFB1-204ENST00000600196 ETDCA0A1B0GVM5 59 aa7.54□□□□□ -1.2
TGFB1-204ENST00000600196 FXYD2P54710 66 aa7.54□□□□□ -1.2
TGFB1-204ENST00000600196 CTAG1AP78358 180 aa7.54□□□□□ -1.2
TGFB1-204ENST00000600196 KRTAP13-1Q8IUC0 172 aa7.54□□□□□ -1.2
TGFB1-204ENST00000600196 DIRC1Q969H9 104 aa7.54□□□□□ -1.2
TGFB1-204ENST00000600196 FAT1Q14517 4588 aa7.52□□□□□ -1.2
TGFB1-204ENST00000600196 B5MCH6 92 aa7.52□□□□□ -1.21
TGFB1-204ENST00000600196 UBE2AP49459 152 aa7.52□□□□□ -1.21
TGFB1-204ENST00000600196 Q6ZRX8 168 aa7.52□□□□□ -1.21
TGFB1-204ENST00000600196 FAM19A1Q7Z5A9 133 aa7.52□□□□□ -1.21
TGFB1-204ENST00000600196 H0YGX0 51 aa7.51□□□□□ -1.21
TGFB1-204ENST00000600196 SMIM11BQ8TCY0 68 aa7.51□□□□□ -1.21
TGFB1-204ENST00000600196 DHRS4-AS1Q9P1J3 65 aa7.51□□□□□ -1.21
TGFB1-204ENST00000600196 RPL13AP40429 203 aaKnown RBP7.5□□□□□ -1.21
TGFB1-204ENST00000600196 ELOF1P60002 83 aaKnown RBP7.5□□□□□ -1.21
TGFB1-204ENST00000600196 C6orf99Q4VX62 202 aa7.5□□□□□ -1.21
TGFB1-204ENST00000600196 NHP2Q9NX24 153 aaKnown RBP7.5□□□□□ -1.21
TGFB1-204ENST00000600196 SNCGO76070 127 aa7.49□□□□□ -1.21
TGFB1-204ENST00000600196 COX7BP24311 80 aa7.49□□□□□ -1.21
TGFB1-204ENST00000600196 VPS13BQ7Z7G8 4022 aa7.49□□□□□ -1.21
TGFB1-204ENST00000600196 COX6CP09669 75 aa7.48□□□□□ -1.21
TGFB1-204ENST00000600196 A0A1B0GX51 115 aa7.47□□□□□ -1.21
TGFB1-204ENST00000600196 ZNF706Q9Y5V0 76 aaPredicted RBP7.47□□□□□ -1.21
TGFB1-204ENST00000600196 SLC25A20O43772 301 aa7.46□□□□□ -1.22
TGFB1-204ENST00000600196 GHRHP01286 108 aa7.45□□□□□ -1.22
TGFB1-204ENST00000600196 Q1RN00 199 aa7.45□□□□□ -1.22
TGFB1-204ENST00000600196 KRTAP17-1Q9BYP8 105 aa7.45□□□□□ -1.22
TGFB1-204ENST00000600196 SRRM2Q9UQ35 2752 aaKnown RBP7.45□□□□□ -1.22
TGFB1-204ENST00000600196 PRLHP81277 87 aa7.44□□□□□ -1.22
TGFB1-204ENST00000600196 SMCR5Q8TEV8 140 aa7.44□□□□□ -1.22
TGFB1-204ENST00000600196 LINC00575Q6W349 94 aa7.43□□□□□ -1.22
TGFB1-204ENST00000600196 HIGD2AQ9BW72 106 aa7.43□□□□□ -1.22
TGFB1-204ENST00000600196 H3BQ85 93 aa7.42□□□□□ -1.22
TGFB1-204ENST00000600196 OXTP01178 125 aa7.42□□□□□ -1.22
TGFB1-204ENST00000600196 FAM229BQ4G0N7 80 aa7.42□□□□□ -1.22
TGFB1-204ENST00000600196 Q9BRP9 147 aa7.42□□□□□ -1.22
TGFB1-204ENST00000600196 hADV29S1A0JD25 119 aa7.41□□□□□ -1.22
TGFB1-204ENST00000600196 TSPAN13O95857 204 aa7.41□□□□□ -1.22
TGFB1-204ENST00000600196 OCIAD2Q56VL3 154 aa7.41□□□□□ -1.22
TGFB1-204ENST00000600196 LYRM7Q5U5X0 104 aa7.41□□□□□ -1.22
TGFB1-204ENST00000600196 PPDPFLQ8WWR9 84 aa7.41□□□□□ -1.22
TGFB1-204ENST00000600196 H7C2G1 150 aa7.4□□□□□ -1.22
TGFB1-204ENST00000600196 K7ERJ3 54 aa7.4□□□□□ -1.22
TGFB1-204ENST00000600196 PSMB2P49721 201 aa7.4□□□□□ -1.22
TGFB1-204ENST00000600196 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.4□□□□□ -1.22
TGFB1-204ENST00000600196 TRIAP1O43715 76 aa7.39□□□□□ -1.23
TGFB1-204ENST00000600196 SPRR1BP22528 89 aa7.39□□□□□ -1.23
TGFB1-204ENST00000600196 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
TGFB1-204ENST00000600196 COL5A1-AS1Q5SY13 56 aa7.39□□□□□ -1.23
TGFB1-204ENST00000600196 LINC01600Q96MT4 127 aa7.39□□□□□ -1.23
TGFB1-204ENST00000600196 SPRR4Q96PI1 79 aa7.39□□□□□ -1.23
TGFB1-204ENST00000600196 SNHG12Q9BXW3 62 aa7.38□□□□□ -1.23
TGFB1-204ENST00000600196 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
TGFB1-204ENST00000600196 IGLV5-48A0A075B6I7 105 aa7.37□□□□□ -1.23
TGFB1-204ENST00000600196 KRTAP29-1A8MX34 341 aaPredicted RBP7.37□□□□□ -1.23
TGFB1-204ENST00000600196 KRTAP1-4P0C5Y4 121 aa7.37□□□□□ -1.23
TGFB1-204ENST00000600196 TRBV20-1A0A075B6N2 111 aa7.36□□□□□ -1.23
TGFB1-204ENST00000600196 TEX49A0A1B0GTD5 131 aa7.36□□□□□ -1.23
TGFB1-204ENST00000600196 C9orf118A6NHY6 69 aa7.36□□□□□ -1.23
TGFB1-204ENST00000600196 ERC2-IT1O76042 136 aa7.36□□□□□ -1.23
TGFB1-204ENST00000600196 TRACP01848 142 aa7.36□□□□□ -1.23
TGFB1-204ENST00000600196 SCGB1C2P0DMR2 95 aa7.36□□□□□ -1.23
TGFB1-204ENST00000600196 CRYGAP11844 174 aa7.36□□□□□ -1.23
TGFB1-204ENST00000600196 BATFQ16520 125 aa7.36□□□□□ -1.23
TGFB1-204ENST00000600196 PCP4L1A6NKN8 68 aa7.34□□□□□ -1.23
TGFB1-204ENST00000600196 TAX1BP3O14907 124 aa7.34□□□□□ -1.23
TGFB1-204ENST00000600196 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
TGFB1-204ENST00000600196 PKHD1L1Q86WI1 4243 aa7.33□□□□□ -1.24
TGFB1-204ENST00000600196 LST1O00453 97 aa7.32□□□□□ -1.24
TGFB1-204ENST00000600196 DNAL4O96015 105 aa7.32□□□□□ -1.24
TGFB1-204ENST00000600196 Q6ZQY7 126 aa7.32□□□□□ -1.24
TGFB1-204ENST00000600196 LAMTOR3Q9UHA4 124 aa7.32□□□□□ -1.24
TGFB1-204ENST00000600196 LINC01547P58512 204 aaPredicted RBP7.31□□□□□ -1.24
TGFB1-204ENST00000600196 ATXN8Q156A1 80 aa7.31□□□□□ -1.24
TGFB1-204ENST00000600196 GAGE2AQ6NT46 116 aa7.31□□□□□ -1.24
TGFB1-204ENST00000600196 SSBP3-AS1Q7Z2R9 100 aa7.31□□□□□ -1.24
TGFB1-204ENST00000600196 FAM218AQ96MZ4 157 aa7.31□□□□□ -1.24
TGFB1-204ENST00000600196 H3BUT2 72 aa7.3□□□□□ -1.24
TGFB1-204ENST00000600196 FABP2P12104 132 aa7.3□□□□□ -1.24
TGFB1-204ENST00000600196 KRTAP10-8P60410 259 aa7.3□□□□□ -1.24
TGFB1-204ENST00000600196 FLG2Q5D862 2391 aaPredicted RBP7.29□□□□□ -1.24
TGFB1-204ENST00000600196 A0A1W2PPM0 123 aa7.29□□□□□ -1.24
TGFB1-204ENST00000600196 TMEM256-PLSCR3K7ERE1 68 aa7.29□□□□□ -1.24
TGFB1-204ENST00000600196 Q8N377 158 aa7.29□□□□□ -1.24
TGFB1-204ENST00000600196 ST20-AS1Q8NBB2 130 aa7.29□□□□□ -1.24
TGFB1-204ENST00000600196 ORMDL1Q9P0S3 153 aa7.29□□□□□ -1.24
TGFB1-204ENST00000600196 CLEC2BQ92478 149 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms