RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 UQCR10Q9UDW1 63 aa9.1□□□□□ -0.95
LIG1-219ENST00000600055 PRYO14603 147 aa9.09□□□□□ -0.95
LIG1-219ENST00000600055 PPDPFQ9H3Y8 114 aa9.09□□□□□ -0.95
LIG1-219ENST00000600055 SPANXB1Q9NS25 103 aaPredicted RBP9.09□□□□□ -0.95
LIG1-219ENST00000600055 HIGD1BQ9P298 99 aa9.09□□□□□ -0.95
LIG1-219ENST00000600055 TRBV10-2A0A0K0K1G8 114 aa9.08□□□□□ -0.96
LIG1-219ENST00000600055 NDUFC2O95298 119 aa9.08□□□□□ -0.96
LIG1-219ENST00000600055 LINC00308Q8TCZ7 52 aa9.08□□□□□ -0.96
LIG1-219ENST00000600055 C12orf57Q99622 126 aa9.08□□□□□ -0.96
LIG1-219ENST00000600055 KCNQ1DNQ9H478 68 aa9.08□□□□□ -0.96
LIG1-219ENST00000600055 DDTP30046 118 aa9.07□□□□□ -0.96
LIG1-219ENST00000600055 HIST1H4GQ99525 98 aa9.07□□□□□ -0.96
LIG1-219ENST00000600055 ANAPC11Q9NYG5 84 aa9.07□□□□□ -0.96
LIG1-219ENST00000600055 SPRR1AP35321 89 aa9.06□□□□□ -0.96
LIG1-219ENST00000600055 LINC00518Q8N0U6 118 aa9.06□□□□□ -0.96
LIG1-219ENST00000600055 TSTD3H0UI37 97 aa9.05□□□□□ -0.96
LIG1-219ENST00000600055 TAL2Q16559 108 aa9.05□□□□□ -0.96
LIG1-219ENST00000600055 KRTAP4-16G5E9R7 235 aaPredicted RBP9.04□□□□□ -0.96
LIG1-219ENST00000600055 IGLV6-57P01721 117 aa9.04□□□□□ -0.96
LIG1-219ENST00000600055 S100A7L2Q5SY68 101 aa9.04□□□□□ -0.96
LIG1-219ENST00000600055 HIGD2AQ9BW72 106 aa9.04□□□□□ -0.96
LIG1-219ENST00000600055 CBY1Q9Y3M2 126 aa9.04□□□□□ -0.96
LIG1-219ENST00000600055 A0A087X002 238 aa9.03□□□□□ -0.96
LIG1-219ENST00000600055 MUSTN1Q8IVN3 82 aa9.03□□□□□ -0.96
LIG1-219ENST00000600055 LINC00337Q8N6G1 96 aa9.03□□□□□ -0.96
LIG1-219ENST00000600055 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
LIG1-219ENST00000600055 HMCN2Q8NDA2 5059 aa9.02□□□□□ -0.97
LIG1-219ENST00000600055 TMEM238LA0A1B0GVL6 79 aa9□□□□□ -0.97
LIG1-219ENST00000600055 A6NJY4 79 aa9□□□□□ -0.97
LIG1-219ENST00000600055 B5MCH6 92 aa9□□□□□ -0.97
LIG1-219ENST00000600055 RPL13AP40429 203 aaKnown RBP9□□□□□ -0.97
LIG1-219ENST00000600055 TRAV23DV6A0A075B6W5 121 aa8.99□□□□□ -0.97
LIG1-219ENST00000600055 CRYGAP11844 174 aa8.99□□□□□ -0.97
LIG1-219ENST00000600055 HSD52Q0P140 79 aa8.99□□□□□ -0.97
LIG1-219ENST00000600055 C2orf91Q6ZV80 131 aa8.99□□□□□ -0.97
LIG1-219ENST00000600055 OR13C6PQ8NH95 151 aa8.99□□□□□ -0.97
LIG1-219ENST00000600055 SMCR5Q8TEV8 140 aa8.99□□□□□ -0.97
LIG1-219ENST00000600055 PRO1933Q9H354 126 aa8.99□□□□□ -0.97
LIG1-219ENST00000600055 KRTAP13-2Q52LG2 175 aa8.98□□□□□ -0.97
LIG1-219ENST00000600055 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
LIG1-219ENST00000600055 ZNF73O43830 326 aaPredicted RBP8.96□□□□□ -0.98
LIG1-219ENST00000600055 ERC2-IT1O76042 136 aa8.96□□□□□ -0.98
LIG1-219ENST00000600055 FAM229BQ4G0N7 80 aa8.96□□□□□ -0.98
LIG1-219ENST00000600055 CEND1Q8N111 149 aa8.96□□□□□ -0.98
LIG1-219ENST00000600055 TYMSOSQ8TAI1 123 aa8.96□□□□□ -0.98
LIG1-219ENST00000600055 SPRR4Q96PI1 79 aa8.96□□□□□ -0.98
LIG1-219ENST00000600055 Q9BRP9 147 aa8.96□□□□□ -0.98
LIG1-219ENST00000600055 A4D1N5 150 aa8.94□□□□□ -0.98
LIG1-219ENST00000600055 Q6ZRX8 168 aa8.94□□□□□ -0.98
LIG1-219ENST00000600055 A6NDN8 102 aa8.93□□□□□ -0.98
LIG1-219ENST00000600055 M0R143 59 aa8.92□□□□□ -0.98
LIG1-219ENST00000600055 HINT1P49773 126 aaPredicted RBP8.92□□□□□ -0.98
LIG1-219ENST00000600055 C3orf22Q8N5N4 141 aa8.92□□□□□ -0.98
LIG1-219ENST00000600055 RAB37Q96AX2 223 aa8.92□□□□□ -0.98
LIG1-219ENST00000600055 ZNF706Q9Y5V0 76 aaPredicted RBP8.92□□□□□ -0.98
LIG1-219ENST00000600055 A0A0B4J2C4 111 aa8.89□□□□□ -0.99
LIG1-219ENST00000600055 TSPAN13O95857 204 aa8.89□□□□□ -0.99
LIG1-219ENST00000600055 CTAG1AP78358 180 aa8.89□□□□□ -0.99
LIG1-219ENST00000600055 GAGE2AQ6NT46 116 aa8.89□□□□□ -0.99
LIG1-219ENST00000600055 C6orf99Q4VX62 202 aa8.88□□□□□ -0.99
LIG1-219ENST00000600055 LINC00483Q53H64 154 aa8.87□□□□□ -0.99
LIG1-219ENST00000600055 CFC1BP0CG36 223 aa8.86□□□□□ -0.99
LIG1-219ENST00000600055 CFC1P0CG37 223 aa8.86□□□□□ -0.99
LIG1-219ENST00000600055 VAMP3Q15836 100 aa8.86□□□□□ -0.99
LIG1-219ENST00000600055 ST20-AS1Q8NBB2 130 aa8.86□□□□□ -0.99
LIG1-219ENST00000600055 PRO1854Q9UHT4 67 aa8.86□□□□□ -0.99
LIG1-219ENST00000600055 COX7BP24311 80 aa8.85□□□□□ -0.99
LIG1-219ENST00000600055 FXYD2P54710 66 aa8.85□□□□□ -0.99
LIG1-219ENST00000600055 ELOF1P60002 83 aaKnown RBP8.85□□□□□ -0.99
LIG1-219ENST00000600055 BVES-AS1Q5T3Y7 98 aa8.85□□□□□ -0.99
LIG1-219ENST00000600055 LINC00304Q8N9R0 145 aa8.85□□□□□ -0.99
LIG1-219ENST00000600055 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
LIG1-219ENST00000600055 TRBV7-6A0A0J9YX20 115 aa8.83□□□□□ -1
LIG1-219ENST00000600055 SMIM11BQ8TCY0 68 aa8.83□□□□□ -1
LIG1-219ENST00000600055 Q1RN00 199 aa8.82□□□□□ -1
LIG1-219ENST00000600055 DHRS4-AS1Q9P1J3 65 aa8.82□□□□□ -1
LIG1-219ENST00000600055 IGLV9-49A0A0B4J1Y8 123 aa8.81□□□□□ -1
LIG1-219ENST00000600055 A0A1B0GWB2 263 aa8.81□□□□□ -1
LIG1-219ENST00000600055 SNCGO76070 127 aa8.81□□□□□ -1
LIG1-219ENST00000600055 Q8NBF4 154 aa8.8□□□□□ -1
LIG1-219ENST00000600055 H7C2G1 150 aa8.79□□□□□ -1
LIG1-219ENST00000600055 MOBPQ13875 183 aa8.79□□□□□ -1
LIG1-219ENST00000600055 PRR4Q16378 134 aa8.79□□□□□ -1
LIG1-219ENST00000600055 COX6CP09669 75 aa8.78□□□□□ -1
LIG1-219ENST00000600055 LRP2P98164 4655 aa8.77□□□□□ -1
LIG1-219ENST00000600055 H0YGX0 51 aa8.77□□□□□ -1.01
LIG1-219ENST00000600055 SLC25A20O43772 301 aa8.77□□□□□ -1.01
LIG1-219ENST00000600055 BATFQ16520 125 aa8.77□□□□□ -1.01
LIG1-219ENST00000600055 PSMB2P49721 201 aa8.76□□□□□ -1.01
LIG1-219ENST00000600055 RETNLBQ9BQ08 111 aa8.76□□□□□ -1.01
LIG1-219ENST00000600055 PCP4L1A6NKN8 68 aa8.75□□□□□ -1.01
LIG1-219ENST00000600055 SPRR1BP22528 89 aa8.75□□□□□ -1.01
LIG1-219ENST00000600055 DEFB105AQ8NG35 78 aa8.75□□□□□ -1.01
LIG1-219ENST00000600055 C9orf153Q5TBE3 101 aa8.74□□□□□ -1.01
LIG1-219ENST00000600055 SPAG11AQ6PDA7 123 aa8.74□□□□□ -1.01
LIG1-219ENST00000600055 SSBP3-AS1Q7Z2R9 100 aa8.74□□□□□ -1.01
LIG1-219ENST00000600055 UBR4Q5T4S7 5183 aa8.73□□□□□ -1.01
LIG1-219ENST00000600055 K7ERJ3 54 aa8.73□□□□□ -1.01
LIG1-219ENST00000600055 LPAP08519 4548 aa8.73□□□□□ -1.01
LIG1-219ENST00000600055 SCGB1C2P0DMR2 95 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms