RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 PRLHP81277 87 aa13.47□□□□□ -0.25
CHMP2A-204ENST00000597848 DIRC1Q969H9 104 aa13.47□□□□□ -0.25
CHMP2A-204ENST00000597848 SPRR1AP35321 89 aa13.46□□□□□ -0.25
CHMP2A-204ENST00000597848 C12orf57Q99622 126 aa13.46□□□□□ -0.25
CHMP2A-204ENST00000597848 ABCA13Q86UQ4 5058 aa13.45□□□□□ -0.26
CHMP2A-204ENST00000597848 CEND1Q8N111 149 aa13.45□□□□□ -0.26
CHMP2A-204ENST00000597848 ZNF73O43830 326 aaPredicted RBP13.44□□□□□ -0.26
CHMP2A-204ENST00000597848 H0Y9J4 135 aa13.42□□□□□ -0.26
CHMP2A-204ENST00000597848 HSD52Q0P140 79 aa13.42□□□□□ -0.26
CHMP2A-204ENST00000597848 KRTAP13-1Q8IUC0 172 aa13.42□□□□□ -0.26
CHMP2A-204ENST00000597848 KRTAP4-16G5E9R7 235 aaPredicted RBP13.41□□□□□ -0.26
CHMP2A-204ENST00000597848 HINT1P49773 126 aaPredicted RBP13.41□□□□□ -0.26
CHMP2A-204ENST00000597848 FLG2Q5D862 2391 aaPredicted RBP13.4□□□□□ -0.26
CHMP2A-204ENST00000597848 B5MCH6 92 aa13.39□□□□□ -0.27
CHMP2A-204ENST00000597848 HIGD2AQ9BW72 106 aa13.39□□□□□ -0.27
CHMP2A-204ENST00000597848 TMEM238LA0A1B0GVL6 79 aa13.38□□□□□ -0.27
CHMP2A-204ENST00000597848 A6NJY4 79 aa13.38□□□□□ -0.27
CHMP2A-204ENST00000597848 RAB37Q96AX2 223 aa13.38□□□□□ -0.27
CHMP2A-204ENST00000597848 CFC1BP0CG36 223 aa13.37□□□□□ -0.27
CHMP2A-204ENST00000597848 CFC1P0CG37 223 aa13.37□□□□□ -0.27
CHMP2A-204ENST00000597848 RPL13AP40429 203 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-204ENST00000597848 FXYD2P54710 66 aa13.37□□□□□ -0.27
CHMP2A-204ENST00000597848 C6orf99Q4VX62 202 aa13.37□□□□□ -0.27
CHMP2A-204ENST00000597848 TSTD3H0UI37 97 aa13.36□□□□□ -0.27
CHMP2A-204ENST00000597848 Q6ZRX8 168 aa13.35□□□□□ -0.27
CHMP2A-204ENST00000597848 SMIM11BQ8TCY0 68 aa13.35□□□□□ -0.27
CHMP2A-204ENST00000597848 A0A0B4J2C4 111 aa13.32□□□□□ -0.28
CHMP2A-204ENST00000597848 H7C2G1 150 aa13.32□□□□□ -0.28
CHMP2A-204ENST00000597848 COX7BP24311 80 aa13.32□□□□□ -0.28
CHMP2A-204ENST00000597848 SMCR5Q8TEV8 140 aa13.32□□□□□ -0.28
CHMP2A-204ENST00000597848 PCLOQ9Y6V0 5065 aa13.31□□□□□ -0.28
CHMP2A-204ENST00000597848 PKHD1L1Q86WI1 4243 aa13.31□□□□□ -0.28
CHMP2A-204ENST00000597848 OXTP01178 125 aa13.31□□□□□ -0.28
CHMP2A-204ENST00000597848 CTAG1AP78358 180 aa13.3□□□□□ -0.28
CHMP2A-204ENST00000597848 NHP2Q9NX24 153 aaKnown RBP13.3□□□□□ -0.28
CHMP2A-204ENST00000597848 TRBV7-6A0A0J9YX20 115 aa13.29□□□□□ -0.28
CHMP2A-204ENST00000597848 Q9BRP9 147 aa13.29□□□□□ -0.28
CHMP2A-204ENST00000597848 ELOF1P60002 83 aaKnown RBP13.28□□□□□ -0.28
CHMP2A-204ENST00000597848 PRO1854Q9UHT4 67 aa13.28□□□□□ -0.28
CHMP2A-204ENST00000597848 A0A1B0GWB2 263 aa13.27□□□□□ -0.29
CHMP2A-204ENST00000597848 KRTAP29-1A8MX34 341 aaPredicted RBP13.27□□□□□ -0.29
CHMP2A-204ENST00000597848 VAMP3Q15836 100 aa13.27□□□□□ -0.29
CHMP2A-204ENST00000597848 BVES-AS1Q5T3Y7 98 aa13.27□□□□□ -0.29
CHMP2A-204ENST00000597848 Q1RN00 199 aa13.26□□□□□ -0.29
CHMP2A-204ENST00000597848 LINC01600Q96MT4 127 aa13.26□□□□□ -0.29
CHMP2A-204ENST00000597848 J3QL48 77 aa13.25□□□□□ -0.29
CHMP2A-204ENST00000597848 ERC2-IT1O76042 136 aa13.25□□□□□ -0.29
CHMP2A-204ENST00000597848 KRTAP1-4P0C5Y4 121 aa13.25□□□□□ -0.29
CHMP2A-204ENST00000597848 DHRS4-AS1Q9P1J3 65 aa13.25□□□□□ -0.29
CHMP2A-204ENST00000597848 ZNF706Q9Y5V0 76 aaPredicted RBP13.24□□□□□ -0.29
CHMP2A-204ENST00000597848 K7ERJ3 54 aa13.23□□□□□ -0.29
CHMP2A-204ENST00000597848 M0R143 59 aa13.23□□□□□ -0.29
CHMP2A-204ENST00000597848 SPRR4Q96PI1 79 aa13.22□□□□□ -0.29
CHMP2A-204ENST00000597848 ANAPC11Q9NYG5 84 aa13.22□□□□□ -0.29
CHMP2A-204ENST00000597848 PRR26Q8N8Z3 221 aa13.2□□□□□ -0.3
CHMP2A-204ENST00000597848 GAGE2AQ6NT46 116 aa13.18□□□□□ -0.3
CHMP2A-204ENST00000597848 SLC25A20O43772 301 aa13.17□□□□□ -0.3
CHMP2A-204ENST00000597848 CRYGAP11844 174 aa13.17□□□□□ -0.3
CHMP2A-204ENST00000597848 MYCBP2O75592 4640 aa13.17□□□□□ -0.3
CHMP2A-204ENST00000597848 ST20-AS1Q8NBB2 130 aa13.16□□□□□ -0.3
CHMP2A-204ENST00000597848 FAM229BQ4G0N7 80 aa13.15□□□□□ -0.3
CHMP2A-204ENST00000597848 MT1HL1P0DM35 61 aa13.14□□□□□ -0.31
CHMP2A-204ENST00000597848 LINC00575Q6W349 94 aa13.14□□□□□ -0.31
CHMP2A-204ENST00000597848 A0A087X002 238 aa13.13□□□□□ -0.31
CHMP2A-204ENST00000597848 PSMB2P49721 201 aa13.13□□□□□ -0.31
CHMP2A-204ENST00000597848 KRTAP10-8P60410 259 aa13.13□□□□□ -0.31
CHMP2A-204ENST00000597848 LRP1Q07954 4544 aaKnown RBP13.13□□□□□ -0.31
CHMP2A-204ENST00000597848 BATFQ16520 125 aa13.12□□□□□ -0.31
CHMP2A-204ENST00000597848 H0YGX0 51 aa13.11□□□□□ -0.31
CHMP2A-204ENST00000597848 TSPAN13O95857 204 aa13.11□□□□□ -0.31
CHMP2A-204ENST00000597848 hADV29S1A0JD25 119 aa13.1□□□□□ -0.31
CHMP2A-204ENST00000597848 LINC00483Q53H64 154 aa13.1□□□□□ -0.31
CHMP2A-204ENST00000597848 DEFB105AQ8NG35 78 aa13.1□□□□□ -0.31
CHMP2A-204ENST00000597848 FAT3Q8TDW7 4589 aa13.1□□□□□ -0.31
CHMP2A-204ENST00000597848 TRIAP1O43715 76 aa13.09□□□□□ -0.31
CHMP2A-204ENST00000597848 TYMSOSQ8TAI1 123 aa13.08□□□□□ -0.32
CHMP2A-204ENST00000597848 SNCGO76070 127 aa13.07□□□□□ -0.32
CHMP2A-204ENST00000597848 COX6CP09669 75 aa13.06□□□□□ -0.32
CHMP2A-204ENST00000597848 KRTAP13-2Q52LG2 175 aa13.06□□□□□ -0.32
CHMP2A-204ENST00000597848 C3orf22Q8N5N4 141 aa13.05□□□□□ -0.32
CHMP2A-204ENST00000597848 DMBT1Q9UGM3 2413 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-204ENST00000597848 TEX49A0A1B0GTD5 131 aa13.03□□□□□ -0.32
CHMP2A-204ENST00000597848 Q6ZQY7 126 aa13.03□□□□□ -0.32
CHMP2A-204ENST00000597848 FAM218AQ96MZ4 157 aa13.03□□□□□ -0.32
CHMP2A-204ENST00000597848 IGLV9-49A0A0B4J1Y8 123 aa13.02□□□□□ -0.33
CHMP2A-204ENST00000597848 SCGB1C2P0DMR2 95 aa13.02□□□□□ -0.33
CHMP2A-204ENST00000597848 SPRR1BP22528 89 aa13.02□□□□□ -0.33
CHMP2A-204ENST00000597848 CLEC2BQ92478 149 aa13.01□□□□□ -0.33
CHMP2A-204ENST00000597848 IGLV5-48A0A075B6I7 105 aa13□□□□□ -0.33
CHMP2A-204ENST00000597848 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13□□□□□ -0.33
CHMP2A-204ENST00000597848 LAMTOR3Q9UHA4 124 aa13□□□□□ -0.33
CHMP2A-204ENST00000597848 PCP4L1A6NKN8 68 aa12.99□□□□□ -0.33
CHMP2A-204ENST00000597848 LINC01547P58512 204 aaPredicted RBP12.99□□□□□ -0.33
CHMP2A-204ENST00000597848 MOBPQ13875 183 aa12.97□□□□□ -0.33
CHMP2A-204ENST00000597848 C9orf153Q5TBE3 101 aa12.97□□□□□ -0.33
CHMP2A-204ENST00000597848 Q8N377 158 aa12.97□□□□□ -0.33
CHMP2A-204ENST00000597848 NAA38Q9BRA0 125 aaKnown RBP12.97□□□□□ -0.33
CHMP2A-204ENST00000597848 A0A1B0GX51 115 aa12.96□□□□□ -0.33
CHMP2A-204ENST00000597848 SNHG12Q9BXW3 62 aa12.93□□□□□ -0.34
CHMP2A-204ENST00000597848 SSBP3-AS1Q7Z2R9 100 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms