RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
LIG1-208ENST00000595758 PYY3Q5JQD4 70 aa8.64□□□□□ -1.03
LIG1-208ENST00000595758 OR13C6PQ8NH95 151 aa8.64□□□□□ -1.03
LIG1-208ENST00000595758 C14orf144Q96I85 54 aa8.64□□□□□ -1.03
LIG1-208ENST00000595758 CBY1Q9Y3M2 126 aa8.63□□□□□ -1.03
LIG1-208ENST00000595758 TRAV23DV6A0A075B6W5 121 aa8.62□□□□□ -1.03
LIG1-208ENST00000595758 KRTAP4-16G5E9R7 235 aaPredicted RBP8.62□□□□□ -1.03
LIG1-208ENST00000595758 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
LIG1-208ENST00000595758 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
LIG1-208ENST00000595758 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
LIG1-208ENST00000595758 ZNF73O43830 326 aaPredicted RBP8.6□□□□□ -1.03
LIG1-208ENST00000595758 SLC25A34Q6PIV7 304 aa8.6□□□□□ -1.03
LIG1-208ENST00000595758 HERC1Q15751 4861 aa8.6□□□□□ -1.03
LIG1-208ENST00000595758 B5MCH6 92 aa8.59□□□□□ -1.03
LIG1-208ENST00000595758 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
LIG1-208ENST00000595758 HIST1H4GQ99525 98 aa8.59□□□□□ -1.03
LIG1-208ENST00000595758 A6NDN8 102 aa8.58□□□□□ -1.04
LIG1-208ENST00000595758 HINT1P49773 126 aaPredicted RBP8.57□□□□□ -1.04
LIG1-208ENST00000595758 SMCR5Q8TEV8 140 aa8.57□□□□□ -1.04
LIG1-208ENST00000595758 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
LIG1-208ENST00000595758 TRAV13-2A0A0B4J235 113 aa8.56□□□□□ -1.04
LIG1-208ENST00000595758 A4D1N5 150 aa8.56□□□□□ -1.04
LIG1-208ENST00000595758 Q6ZRX8 168 aa8.56□□□□□ -1.04
LIG1-208ENST00000595758 TNXBP22105 4242 aa8.56□□□□□ -1.04
LIG1-208ENST00000595758 RPL13AP40429 203 aaKnown RBP8.55□□□□□ -1.04
LIG1-208ENST00000595758 C2orf91Q6ZV80 131 aa8.55□□□□□ -1.04
LIG1-208ENST00000595758 ANAPC11Q9NYG5 84 aa8.55□□□□□ -1.04
LIG1-208ENST00000595758 CRYGAP11844 174 aa8.54□□□□□ -1.04
LIG1-208ENST00000595758 ZNF706Q9Y5V0 76 aaPredicted RBP8.54□□□□□ -1.04
LIG1-208ENST00000595758 FAM229BQ4G0N7 80 aa8.53□□□□□ -1.04
LIG1-208ENST00000595758 C6orf99Q4VX62 202 aa8.53□□□□□ -1.04
LIG1-208ENST00000595758 SPRR4Q96PI1 79 aa8.53□□□□□ -1.04
LIG1-208ENST00000595758 Q9BRP9 147 aa8.53□□□□□ -1.04
LIG1-208ENST00000595758 A0A087X002 238 aa8.52□□□□□ -1.05
LIG1-208ENST00000595758 ERC2-IT1O76042 136 aa8.52□□□□□ -1.05
LIG1-208ENST00000595758 COX7BP24311 80 aa8.51□□□□□ -1.05
LIG1-208ENST00000595758 TRBV7-6A0A0J9YX20 115 aa8.5□□□□□ -1.05
LIG1-208ENST00000595758 TAL2Q16559 108 aa8.5□□□□□ -1.05
LIG1-208ENST00000595758 C12orf57Q99622 126 aa8.5□□□□□ -1.05
LIG1-208ENST00000595758 ELOF1P60002 83 aaKnown RBP8.49□□□□□ -1.05
LIG1-208ENST00000595758 SMIM11BQ8TCY0 68 aa8.49□□□□□ -1.05
LIG1-208ENST00000595758 DHRS4-AS1Q9P1J3 65 aa8.49□□□□□ -1.05
LIG1-208ENST00000595758 TYMSOSQ8TAI1 123 aa8.48□□□□□ -1.05
LIG1-208ENST00000595758 UQCR10Q9UDW1 63 aa8.48□□□□□ -1.05
LIG1-208ENST00000595758 KRTAP13-2Q52LG2 175 aa8.47□□□□□ -1.05
LIG1-208ENST00000595758 GAGE2AQ6NT46 116 aa8.47□□□□□ -1.05
LIG1-208ENST00000595758 CEND1Q8N111 149 aa8.47□□□□□ -1.05
LIG1-208ENST00000595758 A0A1B0GWB2 263 aa8.46□□□□□ -1.06
LIG1-208ENST00000595758 CFC1BP0CG36 223 aa8.46□□□□□ -1.06
LIG1-208ENST00000595758 CFC1P0CG37 223 aa8.46□□□□□ -1.06
LIG1-208ENST00000595758 SMIM6P0DI80 62 aa8.45□□□□□ -1.06
LIG1-208ENST00000595758 LINC00483Q53H64 154 aa8.45□□□□□ -1.06
LIG1-208ENST00000595758 RAB37Q96AX2 223 aa8.45□□□□□ -1.06
LIG1-208ENST00000595758 TMEM238LA0A1B0GVL6 79 aa8.44□□□□□ -1.06
LIG1-208ENST00000595758 A6NJY4 79 aa8.44□□□□□ -1.06
LIG1-208ENST00000595758 HSD52Q0P140 79 aa8.44□□□□□ -1.06
LIG1-208ENST00000595758 VAMP3Q15836 100 aa8.44□□□□□ -1.06
LIG1-208ENST00000595758 ST20-AS1Q8NBB2 130 aa8.44□□□□□ -1.06
LIG1-208ENST00000595758 A0A0B4J2C4 111 aa8.43□□□□□ -1.06
LIG1-208ENST00000595758 C3orf22Q8N5N4 141 aa8.43□□□□□ -1.06
LIG1-208ENST00000595758 LOC105371267A0A1B0GV96 52 aa8.42□□□□□ -1.06
LIG1-208ENST00000595758 H7C2G1 150 aa8.42□□□□□ -1.06
LIG1-208ENST00000595758 FXYD2P54710 66 aa8.42□□□□□ -1.06
LIG1-208ENST00000595758 PRO1933Q9H354 126 aa8.42□□□□□ -1.06
LIG1-208ENST00000595758 NHP2Q9NX24 153 aaKnown RBP8.4□□□□□ -1.06
LIG1-208ENST00000595758 SLC25A20O43772 301 aa8.39□□□□□ -1.07
LIG1-208ENST00000595758 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
LIG1-208ENST00000595758 HMCN2Q8NDA2 5059 aa8.39□□□□□ -1.07
LIG1-208ENST00000595758 SPRR1BP22528 89 aa8.38□□□□□ -1.07
LIG1-208ENST00000595758 BVES-AS1Q5T3Y7 98 aa8.38□□□□□ -1.07
LIG1-208ENST00000595758 LINC00575Q6W349 94 aa8.38□□□□□ -1.07
LIG1-208ENST00000595758 LINC00304Q8N9R0 145 aa8.38□□□□□ -1.07
LIG1-208ENST00000595758 IGLV9-49A0A0B4J1Y8 123 aa8.37□□□□□ -1.07
LIG1-208ENST00000595758 TSPAN13O95857 204 aa8.37□□□□□ -1.07
LIG1-208ENST00000595758 DEFB105AQ8NG35 78 aa8.37□□□□□ -1.07
LIG1-208ENST00000595758 Q1RN00 199 aa8.36□□□□□ -1.07
LIG1-208ENST00000595758 TEX49A0A1B0GTD5 131 aa8.35□□□□□ -1.07
LIG1-208ENST00000595758 MOBPQ13875 183 aa8.35□□□□□ -1.07
LIG1-208ENST00000595758 Q8NBF4 154 aa8.35□□□□□ -1.07
LIG1-208ENST00000595758 hADV29S1A0JD25 119 aa8.34□□□□□ -1.07
LIG1-208ENST00000595758 SSBP3-AS1Q7Z2R9 100 aa8.34□□□□□ -1.07
LIG1-208ENST00000595758 LAMTOR3Q9UHA4 124 aa8.34□□□□□ -1.07
LIG1-208ENST00000595758 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
LIG1-208ENST00000595758 K7ERJ3 54 aa8.33□□□□□ -1.08
LIG1-208ENST00000595758 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
LIG1-208ENST00000595758 C9orf153Q5TBE3 101 aa8.33□□□□□ -1.08
LIG1-208ENST00000595758 H0YGX0 51 aa8.32□□□□□ -1.08
LIG1-208ENST00000595758 LINC01547P58512 204 aaPredicted RBP8.32□□□□□ -1.08
LIG1-208ENST00000595758 SPAG11AQ6PDA7 123 aa8.32□□□□□ -1.08
LIG1-208ENST00000595758 CTAG1AP78358 180 aa8.31□□□□□ -1.08
LIG1-208ENST00000595758 TSTD3H0UI37 97 aa8.3□□□□□ -1.08
LIG1-208ENST00000595758 Q6ZQY7 126 aa8.3□□□□□ -1.08
LIG1-208ENST00000595758 SNCGO76070 127 aa8.29□□□□□ -1.08
LIG1-208ENST00000595758 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.29□□□□□ -1.08
LIG1-208ENST00000595758 SMIM29Q86T20 159 aa8.29□□□□□ -1.08
LIG1-208ENST00000595758 Q8N377 158 aa8.29□□□□□ -1.08
LIG1-208ENST00000595758 M0R143 59 aa8.28□□□□□ -1.08
LIG1-208ENST00000595758 TRIAP1O43715 76 aa8.28□□□□□ -1.08
LIG1-208ENST00000595758 PSMB2P49721 201 aa8.28□□□□□ -1.08
LIG1-208ENST00000595758 FAM218AQ96MZ4 157 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms