RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CRYGAP11844 174 aa10.32□□□□□ -0.76
SHKBP1-203ENST00000594298 Q6ZVH6 145 aa10.32□□□□□ -0.76
SHKBP1-203ENST00000594298 HIGD2AQ9BW72 106 aa10.32□□□□□ -0.76
SHKBP1-203ENST00000594298 SPANXDQ9BXN6 97 aa10.32□□□□□ -0.76
SHKBP1-203ENST00000594298 A0A087X002 238 aa10.31□□□□□ -0.76
SHKBP1-203ENST00000594298 EIF4EBP3O60516 100 aaPredicted RBP10.31□□□□□ -0.76
SHKBP1-203ENST00000594298 TSPAN13O95857 204 aa10.31□□□□□ -0.76
SHKBP1-203ENST00000594298 IGLV6-57P01721 117 aa10.31□□□□□ -0.76
SHKBP1-203ENST00000594298 PCP2Q8IVA1 136 aa10.31□□□□□ -0.76
SHKBP1-203ENST00000594298 LINC00518Q8N0U6 118 aa10.31□□□□□ -0.76
SHKBP1-203ENST00000594298 IFITM1P13164 125 aa10.3□□□□□ -0.76
SHKBP1-203ENST00000594298 FAM229BQ4G0N7 80 aa10.29□□□□□ -0.76
SHKBP1-203ENST00000594298 TRAV23DV6A0A075B6W5 121 aa10.28□□□□□ -0.76
SHKBP1-203ENST00000594298 KRTAP4-16G5E9R7 235 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-203ENST00000594298 OR13C6PQ8NH95 151 aa10.28□□□□□ -0.76
SHKBP1-203ENST00000594298 TYMSOSQ8TAI1 123 aa10.28□□□□□ -0.76
SHKBP1-203ENST00000594298 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
SHKBP1-203ENST00000594298 ZNF706Q9Y5V0 76 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-203ENST00000594298 HINT1P49773 126 aaPredicted RBP10.27□□□□□ -0.77
SHKBP1-203ENST00000594298 B5MCH6 92 aa10.26□□□□□ -0.77
SHKBP1-203ENST00000594298 JOSD1Q15040 202 aaPredicted RBP10.26□□□□□ -0.77
SHKBP1-203ENST00000594298 SMCR5Q8TEV8 140 aa10.25□□□□□ -0.77
SHKBP1-203ENST00000594298 ZNF73O43830 326 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-203ENST00000594298 ANAPC11Q9NYG5 84 aa10.24□□□□□ -0.77
SHKBP1-203ENST00000594298 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
SHKBP1-203ENST00000594298 Q6ZRX8 168 aa10.22□□□□□ -0.77
SHKBP1-203ENST00000594298 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
SHKBP1-203ENST00000594298 KRTAP13-2Q52LG2 175 aa10.21□□□□□ -0.77
SHKBP1-203ENST00000594298 KRTAP9-2Q9BYQ4 174 aa10.21□□□□□ -0.77
SHKBP1-203ENST00000594298 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-203ENST00000594298 FAT4Q6V0I7 4981 aa10.18□□□□□ -0.78
SHKBP1-203ENST00000594298 A6NDN8 102 aa10.17□□□□□ -0.78
SHKBP1-203ENST00000594298 COX8AP10176 69 aa10.17□□□□□ -0.78
SHKBP1-203ENST00000594298 CTAG1AP78358 180 aa10.17□□□□□ -0.78
SHKBP1-203ENST00000594298 TRAV13-2A0A0B4J235 113 aa10.16□□□□□ -0.78
SHKBP1-203ENST00000594298 LINC00304Q8N9R0 145 aa10.16□□□□□ -0.78
SHKBP1-203ENST00000594298 Q9BRP9 147 aa10.16□□□□□ -0.78
SHKBP1-203ENST00000594298 DLEU1O43261 78 aa10.15□□□□□ -0.78
SHKBP1-203ENST00000594298 RETNLBQ9BQ08 111 aa10.15□□□□□ -0.78
SHKBP1-203ENST00000594298 ERC2-IT1O76042 136 aa10.14□□□□□ -0.79
SHKBP1-203ENST00000594298 COX7BP24311 80 aa10.14□□□□□ -0.79
SHKBP1-203ENST00000594298 TPRXLQ17RH7 258 aa10.14□□□□□ -0.79
SHKBP1-203ENST00000594298 GAGE2AQ6NT46 116 aa10.14□□□□□ -0.79
SHKBP1-203ENST00000594298 VAMP8Q9BV40 100 aa10.14□□□□□ -0.79
SHKBP1-203ENST00000594298 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
SHKBP1-203ENST00000594298 C6orf99Q4VX62 202 aa10.13□□□□□ -0.79
SHKBP1-203ENST00000594298 SPATA45Q537H7 98 aa10.13□□□□□ -0.79
SHKBP1-203ENST00000594298 LINC00483Q53H64 154 aa10.13□□□□□ -0.79
SHKBP1-203ENST00000594298 MUC17Q685J3 4493 aa10.12□□□□□ -0.79
SHKBP1-203ENST00000594298 TRBV7-6A0A0J9YX20 115 aa10.12□□□□□ -0.79
SHKBP1-203ENST00000594298 HIST1H4GQ99525 98 aa10.12□□□□□ -0.79
SHKBP1-203ENST00000594298 PAM16Q9Y3D7 125 aa10.12□□□□□ -0.79
SHKBP1-203ENST00000594298 ELOF1P60002 83 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-203ENST00000594298 C3orf22Q8N5N4 141 aa10.11□□□□□ -0.79
SHKBP1-203ENST00000594298 CDIP1Q9H305 208 aa10.11□□□□□ -0.79
SHKBP1-203ENST00000594298 C14orf144Q96I85 54 aa10.1□□□□□ -0.79
SHKBP1-203ENST00000594298 TMA7Q9Y2S6 64 aaKnown RBP10.1□□□□□ -0.79
SHKBP1-203ENST00000594298 IGLV7-46A0A075B6I9 117 aa10.09□□□□□ -0.79
SHKBP1-203ENST00000594298 A4D1N5 150 aa10.09□□□□□ -0.79
SHKBP1-203ENST00000594298 SLC25A34Q6PIV7 304 aa10.09□□□□□ -0.79
SHKBP1-203ENST00000594298 A0A1B0GWB2 263 aa10.08□□□□□ -0.8
SHKBP1-203ENST00000594298 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
SHKBP1-203ENST00000594298 SPAG11AQ6PDA7 123 aa10.08□□□□□ -0.8
SHKBP1-203ENST00000594298 HIGD1BQ9P298 99 aa10.07□□□□□ -0.8
SHKBP1-203ENST00000594298 VAMP3Q15836 100 aa10.05□□□□□ -0.8
SHKBP1-203ENST00000594298 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
SHKBP1-203ENST00000594298 ST20-AS1Q8NBB2 130 aa10.04□□□□□ -0.8
SHKBP1-203ENST00000594298 SMIM11BQ8TCY0 68 aa10.04□□□□□ -0.8
SHKBP1-203ENST00000594298 NHP2Q9NX24 153 aaKnown RBP10.04□□□□□ -0.8
SHKBP1-203ENST00000594298 IGLV9-49A0A0B4J1Y8 123 aa10.03□□□□□ -0.8
SHKBP1-203ENST00000594298 PYY3Q5JQD4 70 aa10.03□□□□□ -0.8
SHKBP1-203ENST00000594298 Q8NBF4 154 aa10.03□□□□□ -0.8
SHKBP1-203ENST00000594298 SPRR1BP22528 89 aa10.01□□□□□ -0.81
SHKBP1-203ENST00000594298 MOBPQ13875 183 aa10.01□□□□□ -0.81
SHKBP1-203ENST00000594298 TAL2Q16559 108 aa10.01□□□□□ -0.81
SHKBP1-203ENST00000594298 SLC25A20O43772 301 aa10□□□□□ -0.81
SHKBP1-203ENST00000594298 LAMTOR3Q9UHA4 124 aa10□□□□□ -0.81
SHKBP1-203ENST00000594298 SPINK1P00995 79 aa9.99□□□□□ -0.81
SHKBP1-203ENST00000594298 C9orf153Q5TBE3 101 aa9.99□□□□□ -0.81
SHKBP1-203ENST00000594298 C12orf57Q99622 126 aa9.99□□□□□ -0.81
SHKBP1-203ENST00000594298 KRTAP9-6A0A140TA67 174 aa9.98□□□□□ -0.81
SHKBP1-203ENST00000594298 C2orf91Q6ZV80 131 aa9.98□□□□□ -0.81
SHKBP1-203ENST00000594298 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-203ENST00000594298 RAB37Q96AX2 223 aa9.98□□□□□ -0.81
SHKBP1-203ENST00000594298 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
SHKBP1-203ENST00000594298 DEFB105AQ8NG35 78 aa9.97□□□□□ -0.81
SHKBP1-203ENST00000594298 TMEM238LA0A1B0GVL6 79 aa9.95□□□□□ -0.82
SHKBP1-203ENST00000594298 A6NJY4 79 aa9.95□□□□□ -0.82
SHKBP1-203ENST00000594298 BVES-AS1Q5T3Y7 98 aa9.95□□□□□ -0.82
SHKBP1-203ENST00000594298 CEND1Q8N111 149 aa9.95□□□□□ -0.82
SHKBP1-203ENST00000594298 CFC1BP0CG36 223 aa9.94□□□□□ -0.82
SHKBP1-203ENST00000594298 CFC1P0CG37 223 aa9.94□□□□□ -0.82
SHKBP1-203ENST00000594298 A0A0B4J2C4 111 aa9.93□□□□□ -0.82
SHKBP1-203ENST00000594298 LINC00575Q6W349 94 aa9.93□□□□□ -0.82
SHKBP1-203ENST00000594298 IGLV5-48A0A075B6I7 105 aa9.92□□□□□ -0.82
SHKBP1-203ENST00000594298 RPS29P62273 56 aaKnown RBP9.92□□□□□ -0.82
SHKBP1-203ENST00000594298 hADV29S1A0JD25 119 aa9.91□□□□□ -0.82
SHKBP1-203ENST00000594298 H7C2G1 150 aa9.91□□□□□ -0.82
SHKBP1-203ENST00000594298 KRTAP13-3Q3SY46 172 aa9.91□□□□□ -0.82
SHKBP1-203ENST00000594298 SNCGO76070 127 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms