RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.06
DNMT1-228ENST00000592705 KCNQ1DNQ9H478 68 aa8.45□□□□□ -1.06
DNMT1-228ENST00000592705 PRRC2CQ9Y520 2896 aaKnown RBP8.45□□□□□ -1.06
DNMT1-228ENST00000592705 LINC01600Q96MT4 127 aa8.45□□□□□ -1.06
DNMT1-228ENST00000592705 CENPEQ02224 2701 aa8.45□□□□□ -1.06
DNMT1-228ENST00000592705 A0A087WTM6 91 aa8.44□□□□□ -1.06
DNMT1-228ENST00000592705 RETNLBQ9BQ08 111 aa8.43□□□□□ -1.06
DNMT1-228ENST00000592705 CHTF8P0CG12 524 aa8.42□□□□□ -1.06
DNMT1-228ENST00000592705 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
DNMT1-228ENST00000592705 SERTAD4-AS1Q5TG53 156 aa8.42□□□□□ -1.06
DNMT1-228ENST00000592705 CASC10Q5T4H9 136 aa8.4□□□□□ -1.06
DNMT1-228ENST00000592705 PCNTO95613 3336 aa8.4□□□□□ -1.06
DNMT1-228ENST00000592705 KLKP1Q107X0 134 aa8.4□□□□□ -1.06
DNMT1-228ENST00000592705 APLNQ9ULZ1 77 aa8.4□□□□□ -1.07
DNMT1-228ENST00000592705 TRAV22A0A0B4J277 110 aa8.39□□□□□ -1.07
DNMT1-228ENST00000592705 COL6A5A8TX70 2615 aa8.39□□□□□ -1.07
DNMT1-228ENST00000592705 FAM168BA1KXE4 195 aa8.39□□□□□ -1.07
DNMT1-228ENST00000592705 ATP11AUNQ6ZP68 121 aa8.39□□□□□ -1.07
DNMT1-228ENST00000592705 C15orf56Q8N910 161 aa8.39□□□□□ -1.07
DNMT1-228ENST00000592705 K7EQZ3 153 aa8.37□□□□□ -1.07
DNMT1-228ENST00000592705 C9orf129Q5T035 196 aaKnown RBP8.37□□□□□ -1.07
DNMT1-228ENST00000592705 CHD9Q3L8U1 2897 aa8.36□□□□□ -1.07
DNMT1-228ENST00000592705 C5orf42Q9H799 3197 aa8.36□□□□□ -1.07
DNMT1-228ENST00000592705 A8MWP4 228 aa8.36□□□□□ -1.07
DNMT1-228ENST00000592705 OBSCN-AS1Q96MR7 158 aa8.36□□□□□ -1.07
DNMT1-228ENST00000592705 ACYP2P14621 99 aa8.35□□□□□ -1.07
DNMT1-228ENST00000592705 SPAG11AQ6PDA7 123 aa8.35□□□□□ -1.07
DNMT1-228ENST00000592705 FAM104AQ969W3 186 aa8.34□□□□□ -1.07
DNMT1-228ENST00000592705 Q8N377 158 aa8.34□□□□□ -1.07
DNMT1-228ENST00000592705 PLA2G2DQ9UNK4 145 aa8.34□□□□□ -1.07
DNMT1-228ENST00000592705 HTTP42858 3142 aa8.33□□□□□ -1.08
DNMT1-228ENST00000592705 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
DNMT1-228ENST00000592705 NOTCH1P46531 2555 aa8.33□□□□□ -1.08
DNMT1-228ENST00000592705 SPINK1P00995 79 aa8.33□□□□□ -1.08
DNMT1-228ENST00000592705 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
DNMT1-228ENST00000592705 IGKV2D-30A0A075B6S6 120 aa8.32□□□□□ -1.08
DNMT1-228ENST00000592705 IGKV2-30P06310 120 aa8.32□□□□□ -1.08
DNMT1-228ENST00000592705 H7BZZ5 65 aa8.31□□□□□ -1.08
DNMT1-228ENST00000592705 IGFL1Q6UW32 110 aa8.31□□□□□ -1.08
DNMT1-228ENST00000592705 C9orf163Q8N9P6 203 aa8.31□□□□□ -1.08
DNMT1-228ENST00000592705 A0A1B0GU69 56 aa8.3□□□□□ -1.08
DNMT1-228ENST00000592705 C7orf65Q6ZTY9 151 aa8.28□□□□□ -1.08
DNMT1-228ENST00000592705 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
DNMT1-228ENST00000592705 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.09
DNMT1-228ENST00000592705 TEX15Q9BXT5 2789 aa8.27□□□□□ -1.09
DNMT1-228ENST00000592705 LINC00313P59037 77 aa8.26□□□□□ -1.09
DNMT1-228ENST00000592705 PRR15Q8IV56 129 aa8.26□□□□□ -1.09
DNMT1-228ENST00000592705 ZNF861PO60384 105 aa8.26□□□□□ -1.09
DNMT1-228ENST00000592705 ZNF292O60281 2723 aa8.25□□□□□ -1.09
DNMT1-228ENST00000592705 TNP2Q05952 138 aa8.25□□□□□ -1.09
DNMT1-228ENST00000592705 MRPL34Q9BQ48 92 aaKnown RBP8.25□□□□□ -1.09
DNMT1-228ENST00000592705 C8orf87E5RJ46 101 aa8.23□□□□□ -1.09
DNMT1-228ENST00000592705 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
DNMT1-228ENST00000592705 GCN1Q92616 2671 aaKnown RBP8.23□□□□□ -1.09
DNMT1-228ENST00000592705 COA5Q86WW8 74 aa8.23□□□□□ -1.09
DNMT1-228ENST00000592705 Q96NJ1 140 aa8.23□□□□□ -1.09
DNMT1-228ENST00000592705 CYP4F30PQ9H0H9 118 aa8.22□□□□□ -1.09
DNMT1-228ENST00000592705 TRANK1O15050 2925 aa8.21□□□□□ -1.09
DNMT1-228ENST00000592705 WIPF1O43516 503 aa8.21□□□□□ -1.09
DNMT1-228ENST00000592705 LCE6AA0A183 80 aa8.21□□□□□ -1.09
DNMT1-228ENST00000592705 A0A1W2PNM2 257 aa8.21□□□□□ -1.1
DNMT1-228ENST00000592705 A8MUN3 132 aa8.21□□□□□ -1.1
DNMT1-228ENST00000592705 IGLV5-48A0A075B6I7 105 aa8.2□□□□□ -1.1
DNMT1-228ENST00000592705 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
DNMT1-228ENST00000592705 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
DNMT1-228ENST00000592705 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
DNMT1-228ENST00000592705 CHD6Q8TD26 2715 aa8.16□□□□□ -1.1
DNMT1-228ENST00000592705 NBEAL1Q6ZS30 2694 aa8.16□□□□□ -1.1
DNMT1-228ENST00000592705 A0A0G2JQZ4 141 aa8.16□□□□□ -1.1
DNMT1-228ENST00000592705 A0A1W2PNN7 141 aa8.16□□□□□ -1.1
DNMT1-228ENST00000592705 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
DNMT1-228ENST00000592705 CNBPP62633 177 aaKnown RBP8.15□□□□□ -1.1
DNMT1-228ENST00000592705 KRTAP21-3Q3LHN1 58 aa8.14□□□□□ -1.11
DNMT1-228ENST00000592705 PSORS1C2Q9UIG4 136 aa8.13□□□□□ -1.11
DNMT1-228ENST00000592705 A0A0C4DFX4 3053 aa8.13□□□□□ -1.11
DNMT1-228ENST00000592705 OCR1Q9BZK8 76 aa8.12□□□□□ -1.11
DNMT1-228ENST00000592705 SPANXA2-OT1Q8N9U9 137 aa8.12□□□□□ -1.11
DNMT1-228ENST00000592705 RBM12B-AS1Q9P1G2 102 aa8.1□□□□□ -1.11
DNMT1-228ENST00000592705 IGSF10Q6WRI0 2623 aa8.09□□□□□ -1.11
DNMT1-228ENST00000592705 SPRR4Q96PI1 79 aa8.08□□□□□ -1.12
DNMT1-228ENST00000592705 C9orf92A6NGG3 77 aa8.08□□□□□ -1.12
DNMT1-228ENST00000592705 RANBP2P49792 3224 aaKnown RBP8.07□□□□□ -1.12
DNMT1-228ENST00000592705 DSCR10P59022 87 aa8.07□□□□□ -1.12
DNMT1-228ENST00000592705 Q8NDZ9 215 aa8.04□□□□□ -1.12
DNMT1-228ENST00000592705 MKI67P46013 3256 aaKnown RBP8.04□□□□□ -1.12
DNMT1-228ENST00000592705 IGLV7-46A0A075B6I9 117 aa8.04□□□□□ -1.12
DNMT1-228ENST00000592705 M0R2T5 61 aa8.04□□□□□ -1.12
DNMT1-228ENST00000592705 UQCR11O14957 56 aa8.04□□□□□ -1.12
DNMT1-228ENST00000592705 AKAP13Q12802 2813 aa8.03□□□□□ -1.12
DNMT1-228ENST00000592705 IGLV8-61A0A075B6I0 122 aa8.02□□□□□ -1.13
DNMT1-228ENST00000592705 Q6ZSA8 131 aa8.02□□□□□ -1.13
DNMT1-228ENST00000592705 ANAPC11Q9NYG5 84 aa8□□□□□ -1.13
DNMT1-228ENST00000592705 Q1T7F1 81 aa8□□□□□ -1.13
DNMT1-228ENST00000592705 Q5VSD8 79 aa7.99□□□□□ -1.13
DNMT1-228ENST00000592705 CR1P17927 2039 aa7.97□□□□□ -1.13
DNMT1-228ENST00000592705 SPRR1AP35321 89 aa7.97□□□□□ -1.13
DNMT1-228ENST00000592705 CYSTM1Q9H1C7 97 aa7.96□□□□□ -1.13
DNMT1-228ENST00000592705 MIR22HGQ0VDD5 57 aa7.96□□□□□ -1.13
DNMT1-228ENST00000592705 PRR26Q8N8Z3 221 aa7.96□□□□□ -1.13
DNMT1-228ENST00000592705 STAB2Q8WWQ8 2551 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms