RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 A0A087WSZ3 146 aa4.14□□□□□ -1.75
SMAD4-212ENST00000591126 AGRNO00468 2067 aa4.14□□□□□ -1.75
SMAD4-212ENST00000591126 LOC400499M0QZD8 3231 aa4.13□□□□□ -1.75
SMAD4-212ENST00000591126 KALRNO60229 2985 aa4.13□□□□□ -1.75
SMAD4-212ENST00000591126 BAHCC1Q9P281 2608 aa4.13□□□□□ -1.75
SMAD4-212ENST00000591126 PLAC8Q9NZF1 115 aa4.13□□□□□ -1.75
SMAD4-212ENST00000591126 SEC61BP60468 96 aaKnown RBP4.12□□□□□ -1.75
SMAD4-212ENST00000591126 IMUPQ9GZP8 106 aa4.12□□□□□ -1.75
SMAD4-212ENST00000591126 CFAP46Q8IYW2 2715 aa4.12□□□□□ -1.75
SMAD4-212ENST00000591126 C15orf56Q8N910 161 aa4.12□□□□□ -1.75
SMAD4-212ENST00000591126 CR1P17927 2039 aa4.12□□□□□ -1.75
SMAD4-212ENST00000591126 SLPIP03973 132 aa4.12□□□□□ -1.75
SMAD4-212ENST00000591126 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
SMAD4-212ENST00000591126 hDV103S1A0JD37 113 aa4.11□□□□□ -1.75
SMAD4-212ENST00000591126 SMR3BP02814 79 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-212ENST00000591126 CXCL6P80162 114 aa4.11□□□□□ -1.75
SMAD4-212ENST00000591126 FLNCQ14315 2725 aa4.11□□□□□ -1.75
SMAD4-212ENST00000591126 Q6Q795 121 aa4.11□□□□□ -1.75
SMAD4-212ENST00000591126 C20orf197Q8N268 126 aa4.11□□□□□ -1.75
SMAD4-212ENST00000591126 TTTY13Q9BZ97 58 aa4.11□□□□□ -1.75
SMAD4-212ENST00000591126 ATMQ13315 3056 aa4.1□□□□□ -1.75
SMAD4-212ENST00000591126 TRBV7-4A0A0J9YYF1 115 aa4.1□□□□□ -1.75
SMAD4-212ENST00000591126 H3BPC8 53 aa4.1□□□□□ -1.75
SMAD4-212ENST00000591126 GAS8-AS1O95177 125 aa4.1□□□□□ -1.75
SMAD4-212ENST00000591126 CHTF8P0CG12 524 aa4.1□□□□□ -1.75
SMAD4-212ENST00000591126 Q5VSD8 79 aa4.1□□□□□ -1.75
SMAD4-212ENST00000591126 SCXQ7RTU7 201 aa4.1□□□□□ -1.75
SMAD4-212ENST00000591126 ASPMQ8IZT6 3477 aa4.1□□□□□ -1.75
SMAD4-212ENST00000591126 UQCRQO14949 82 aa4.1□□□□□ -1.75
SMAD4-212ENST00000591126 IGLV6-57P01721 117 aa4.09□□□□□ -1.75
SMAD4-212ENST00000591126 FP248Q71RG6 208 aaPredicted RBP4.09□□□□□ -1.75
SMAD4-212ENST00000591126 YPEL4Q96NS1 127 aa4.09□□□□□ -1.75
SMAD4-212ENST00000591126 KIAA0087Q14695 138 aa4.09□□□□□ -1.76
SMAD4-212ENST00000591126 WFDC13Q8IUB5 93 aa4.09□□□□□ -1.76
SMAD4-212ENST00000591126 IGKV3D-7A0A0C4DH55 119 aa4.09□□□□□ -1.76
SMAD4-212ENST00000591126 COL12A1Q99715 3063 aa4.08□□□□□ -1.76
SMAD4-212ENST00000591126 ST20-AS1Q8NBB2 130 aa4.08□□□□□ -1.76
SMAD4-212ENST00000591126 IGLV7-46A0A075B6I9 117 aa4.08□□□□□ -1.76
SMAD4-212ENST00000591126 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
SMAD4-212ENST00000591126 MAP1AP78559 2803 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-212ENST00000591126 Q6ZR54 194 aa4.07□□□□□ -1.76
SMAD4-212ENST00000591126 SPRR4Q96PI1 79 aa4.07□□□□□ -1.76
SMAD4-212ENST00000591126 SDIM1Q6ZPB5 146 aa4.07□□□□□ -1.76
SMAD4-212ENST00000591126 FAM30AQ9NZY2 134 aa4.07□□□□□ -1.76
SMAD4-212ENST00000591126 ITPR1Q14643 2758 aa4.07□□□□□ -1.76
SMAD4-212ENST00000591126 PRR3P79522 188 aaKnown RBP4.07□□□□□ -1.76
SMAD4-212ENST00000591126 HCG22E2RYF7 251 aa4.06□□□□□ -1.76
SMAD4-212ENST00000591126 Q96NJ1 140 aa4.06□□□□□ -1.76
SMAD4-212ENST00000591126 LAMA5O15230 3695 aa4.06□□□□□ -1.76
SMAD4-212ENST00000591126 NBEAQ8NFP9 2946 aa4.06□□□□□ -1.76
SMAD4-212ENST00000591126 MUC4Q99102 2169 aa4.05□□□□□ -1.76
SMAD4-212ENST00000591126 Q6ZSA8 131 aa4.05□□□□□ -1.76
SMAD4-212ENST00000591126 C3orf22Q8N5N4 141 aa4.05□□□□□ -1.76
SMAD4-212ENST00000591126 ADAMTSL4-AS1Q5T5F5 129 aa4.05□□□□□ -1.76
SMAD4-212ENST00000591126 C2orf91Q6ZV80 131 aa4.04□□□□□ -1.76
SMAD4-212ENST00000591126 LOC110117498A0A087WWA1 95 aa4.04□□□□□ -1.76
SMAD4-212ENST00000591126 TRBV7-7A0A0K0K1E9 115 aa4.04□□□□□ -1.76
SMAD4-212ENST00000591126 MAST4O15021 2626 aa4.04□□□□□ -1.76
SMAD4-212ENST00000591126 TSPEAR-AS2P59090 65 aa4.04□□□□□ -1.76
SMAD4-212ENST00000591126 DSCAML1Q8TD84 2053 aa4.03□□□□□ -1.76
SMAD4-212ENST00000591126 LOC101927531A0A1B0GV80 90 aa4.03□□□□□ -1.76
SMAD4-212ENST00000591126 GCN1Q92616 2671 aaKnown RBP4.03□□□□□ -1.76
SMAD4-212ENST00000591126 SETD2Q9BYW2 2564 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-212ENST00000591126 A0A096LNJ9 63 aa4.03□□□□□ -1.76
SMAD4-212ENST00000591126 LINC01547P58512 204 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-212ENST00000591126 URB1-AS1Q96HZ7 61 aa4.03□□□□□ -1.76
SMAD4-212ENST00000591126 TEP1Q99973 2627 aaKnown RBP4.03□□□□□ -1.76
SMAD4-212ENST00000591126 SMIM26A0A096LP01 95 aa4.02□□□□□ -1.77
SMAD4-212ENST00000591126 Q8N3U1 123 aa4.02□□□□□ -1.77
SMAD4-212ENST00000591126 A8MWP4 228 aa4.02□□□□□ -1.77
SMAD4-212ENST00000591126 LINC00846Q9NV44 126 aa4.02□□□□□ -1.77
SMAD4-212ENST00000591126 ITPR3Q14573 2671 aa4.01□□□□□ -1.77
SMAD4-212ENST00000591126 C9orf129Q5T035 196 aaKnown RBP4.01□□□□□ -1.77
SMAD4-212ENST00000591126 Q9UF83 564 aa4.01□□□□□ -1.77
SMAD4-212ENST00000591126 TMEM254Q8TBM7 123 aa4.01□□□□□ -1.77
SMAD4-212ENST00000591126 TRAV22A0A0B4J277 110 aa4.01□□□□□ -1.77
SMAD4-212ENST00000591126 SETXQ7Z333 2677 aaKnown RBP4.01□□□□□ -1.77
SMAD4-212ENST00000591126 FLNAP21333 2647 aaKnown RBP4□□□□□ -1.77
SMAD4-212ENST00000591126 IGKV2D-30A0A075B6S6 120 aa4□□□□□ -1.77
SMAD4-212ENST00000591126 FAM236AA0A1B0GUQ0 79 aa4□□□□□ -1.77
SMAD4-212ENST00000591126 FAM236BA0A1B0GV22 79 aa4□□□□□ -1.77
SMAD4-212ENST00000591126 IGKV2-30P06310 120 aa4□□□□□ -1.77
SMAD4-212ENST00000591126 Q8N1X5 172 aa4□□□□□ -1.77
SMAD4-212ENST00000591126 WFDC2Q14508 124 aa4□□□□□ -1.77
SMAD4-212ENST00000591126 MRPL34Q9BQ48 92 aaKnown RBP4□□□□□ -1.77
SMAD4-212ENST00000591126 ADGRG4Q8IZF6 3080 aa4□□□□□ -1.77
SMAD4-212ENST00000591126 UNC79Q9P2D8 2635 aa4□□□□□ -1.77
SMAD4-212ENST00000591126 A0A1W2PNN7 141 aa4□□□□□ -1.77
SMAD4-212ENST00000591126 ACYP2P14621 99 aa4□□□□□ -1.77
SMAD4-212ENST00000591126 TRAV7A0A075B6U4 112 aa3.99□□□□□ -1.77
SMAD4-212ENST00000591126 H0Y9P7 68 aa3.99□□□□□ -1.77
SMAD4-212ENST00000591126 SERP2Q8N6R1 65 aa3.99□□□□□ -1.77
SMAD4-212ENST00000591126 C7orf65Q6ZTY9 151 aa3.99□□□□□ -1.77
SMAD4-212ENST00000591126 FAM168BA1KXE4 195 aa3.99□□□□□ -1.77
SMAD4-212ENST00000591126 ITPR2Q14571 2701 aa3.98□□□□□ -1.77
SMAD4-212ENST00000591126 EIF4EBP3O60516 100 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-212ENST00000591126 RPS29P62273 56 aaKnown RBP3.98□□□□□ -1.77
SMAD4-212ENST00000591126 LINC00208Q96KT6 92 aa3.98□□□□□ -1.77
SMAD4-212ENST00000591126 KMT2BQ9UMN6 2715 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-212ENST00000591126 WDFY3Q8IZQ1 3526 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 295.6 ms