RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 Q8N377 158 aa10.06□□□□□ -0.8
PRKCSH-211ENST00000590098 NPC2P61916 151 aa10.04□□□□□ -0.8
PRKCSH-211ENST00000590098 C9orf153Q5TBE3 101 aa10.04□□□□□ -0.8
PRKCSH-211ENST00000590098 ZNF73O43830 326 aaPredicted RBP10.03□□□□□ -0.8
PRKCSH-211ENST00000590098 CBY1Q9Y3M2 126 aa10.03□□□□□ -0.8
PRKCSH-211ENST00000590098 A0A0J9YXY3 114 aa10.02□□□□□ -0.81
PRKCSH-211ENST00000590098 HINT1P49773 126 aaPredicted RBP10.02□□□□□ -0.81
PRKCSH-211ENST00000590098 KRTAP4-1Q9BYQ7 146 aa10.02□□□□□ -0.81
PRKCSH-211ENST00000590098 ADAMTSL4-AS1Q5T5F5 129 aa10.01□□□□□ -0.81
PRKCSH-211ENST00000590098 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
PRKCSH-211ENST00000590098 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
PRKCSH-211ENST00000590098 KRTAP9-6A0A140TA67 174 aa9.99□□□□□ -0.81
PRKCSH-211ENST00000590098 C5orf52A6NGY3 159 aa9.99□□□□□ -0.81
PRKCSH-211ENST00000590098 E9PLD3 99 aa9.99□□□□□ -0.81
PRKCSH-211ENST00000590098 EIF4EBP3O60516 100 aaPredicted RBP9.99□□□□□ -0.81
PRKCSH-211ENST00000590098 ST20-AS1Q8NBB2 130 aa9.99□□□□□ -0.81
PRKCSH-211ENST00000590098 OR13C6PQ8NH95 151 aa9.97□□□□□ -0.81
PRKCSH-211ENST00000590098 COLCA2A8K830 154 aa9.95□□□□□ -0.82
PRKCSH-211ENST00000590098 SPANXCQ9NY87 97 aa9.95□□□□□ -0.82
PRKCSH-211ENST00000590098 XP32Q5T750 250 aa9.94□□□□□ -0.82
PRKCSH-211ENST00000590098 SLC25A34Q6PIV7 304 aa9.94□□□□□ -0.82
PRKCSH-211ENST00000590098 LINC00308Q8TCZ7 52 aa9.94□□□□□ -0.82
PRKCSH-211ENST00000590098 DHRS4-AS1Q9P1J3 65 aa9.93□□□□□ -0.82
PRKCSH-211ENST00000590098 SYS1-DBNDD2H3BUS1 97 aa9.92□□□□□ -0.82
PRKCSH-211ENST00000590098 TIMM17BO60830 172 aa9.92□□□□□ -0.82
PRKCSH-211ENST00000590098 LITAFQ99732 161 aa9.91□□□□□ -0.82
PRKCSH-211ENST00000590098 LIMD2Q9BT23 127 aa9.91□□□□□ -0.82
PRKCSH-211ENST00000590098 SPRR1BP22528 89 aa9.9□□□□□ -0.82
PRKCSH-211ENST00000590098 HRCT1Q6UXD1 115 aa9.89□□□□□ -0.83
PRKCSH-211ENST00000590098 SLC7A5P1Q8MH63 180 aa9.89□□□□□ -0.83
PRKCSH-211ENST00000590098 SPANXDQ9BXN6 97 aa9.89□□□□□ -0.83
PRKCSH-211ENST00000590098 LAMTOR3Q9UHA4 124 aa9.89□□□□□ -0.83
PRKCSH-211ENST00000590098 ZNF815PA8K554 130 aa9.88□□□□□ -0.83
PRKCSH-211ENST00000590098 LINC00518Q8N0U6 118 aa9.87□□□□□ -0.83
PRKCSH-211ENST00000590098 COX7BP24311 80 aa9.86□□□□□ -0.83
PRKCSH-211ENST00000590098 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
PRKCSH-211ENST00000590098 ELOF1P60002 83 aaKnown RBP9.85□□□□□ -0.83
PRKCSH-211ENST00000590098 TAL2Q16559 108 aa9.85□□□□□ -0.83
PRKCSH-211ENST00000590098 PET117Q6UWS5 81 aa9.85□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST1H2BKO60814 126 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST1H2BJP06899 126 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST1H2BOP23527 126 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST1H2BBP33778 126 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST1H2BDP58876 126 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST1H2BCP62807 126 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST2H2BEQ16778 126 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 C6orf99Q4VX62 202 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST1H2BHQ93079 126 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST1H2BNQ99877 126 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 HIST1H2BMQ99879 126 aa9.84□□□□□ -0.83
PRKCSH-211ENST00000590098 DEFB105AQ8NG35 78 aa9.83□□□□□ -0.84
PRKCSH-211ENST00000590098 Q1RN00 199 aa9.82□□□□□ -0.84
PRKCSH-211ENST00000590098 TTTY13Q9BZ97 58 aa9.82□□□□□ -0.84
PRKCSH-211ENST00000590098 PRO1933Q9H354 126 aa9.81□□□□□ -0.84
PRKCSH-211ENST00000590098 TEX49A0A1B0GTD5 131 aa9.8□□□□□ -0.84
PRKCSH-211ENST00000590098 C9orf92A6NGG3 77 aa9.8□□□□□ -0.84
PRKCSH-211ENST00000590098 CD164Q04900 197 aa9.8□□□□□ -0.84
PRKCSH-211ENST00000590098 LCE2CQ5TA81 110 aa9.8□□□□□ -0.84
PRKCSH-211ENST00000590098 SCGB1D4Q6XE38 83 aa9.79□□□□□ -0.84
PRKCSH-211ENST00000590098 COPS9Q8WXC6 57 aa9.79□□□□□ -0.84
PRKCSH-211ENST00000590098 TRBV7-6A0A0J9YX20 115 aa9.78□□□□□ -0.84
PRKCSH-211ENST00000590098 C3orf79P0CE67 100 aa9.78□□□□□ -0.84
PRKCSH-211ENST00000590098 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
PRKCSH-211ENST00000590098 LCE2DQ5TA82 110 aaPredicted RBP9.78□□□□□ -0.84
PRKCSH-211ENST00000590098 H7C2G1 150 aa9.77□□□□□ -0.85
PRKCSH-211ENST00000590098 IGLV8-61A0A075B6I0 122 aa9.76□□□□□ -0.85
PRKCSH-211ENST00000590098 KRTDAPP60985 99 aa9.76□□□□□ -0.85
PRKCSH-211ENST00000590098 A0A1B0GWB2 263 aa9.75□□□□□ -0.85
PRKCSH-211ENST00000590098 A6NDN8 102 aa9.75□□□□□ -0.85
PRKCSH-211ENST00000590098 AKR1D1P51857 326 aa9.75□□□□□ -0.85
PRKCSH-211ENST00000590098 KRTAP19-2Q3LHN2 52 aa9.75□□□□□ -0.85
PRKCSH-211ENST00000590098 IFITM1P13164 125 aa9.74□□□□□ -0.85
PRKCSH-211ENST00000590098 FSIP2Q5CZC0 6907 aa9.74□□□□□ -0.85
PRKCSH-211ENST00000590098 C20orf202A1L168 122 aa9.73□□□□□ -0.85
PRKCSH-211ENST00000590098 Q6ZVH6 145 aa9.72□□□□□ -0.85
PRKCSH-211ENST00000590098 SMIM29Q86T20 159 aa9.72□□□□□ -0.85
PRKCSH-211ENST00000590098 IGLV5-48A0A075B6I7 105 aa9.71□□□□□ -0.86
PRKCSH-211ENST00000590098 Q5XG85 94 aa9.71□□□□□ -0.86
PRKCSH-211ENST00000590098 A4D1N5 150 aa9.7□□□□□ -0.86
PRKCSH-211ENST00000590098 ANKRD39Q53RE8 183 aa9.7□□□□□ -0.86
PRKCSH-211ENST00000590098 C1orf195Q5TG92 126 aa9.69□□□□□ -0.86
PRKCSH-211ENST00000590098 MUSTN1Q8IVN3 82 aa9.69□□□□□ -0.86
PRKCSH-211ENST00000590098 NHP2Q9NX24 153 aaKnown RBP9.69□□□□□ -0.86
PRKCSH-211ENST00000590098 COA6Q5JTJ3 125 aaKnown RBP9.68□□□□□ -0.86
PRKCSH-211ENST00000590098 A0A0G2JQZ4 141 aa9.67□□□□□ -0.86
PRKCSH-211ENST00000590098 ATOH7Q8N100 152 aa9.67□□□□□ -0.86
PRKCSH-211ENST00000590098 TRAV13-2A0A0B4J235 113 aa9.66□□□□□ -0.86
PRKCSH-211ENST00000590098 MT1HP80294 61 aa9.66□□□□□ -0.86
PRKCSH-211ENST00000590098 PCP2Q8IVA1 136 aa9.65□□□□□ -0.86
PRKCSH-211ENST00000590098 CRCT1Q9UGL9 99 aa9.65□□□□□ -0.86
PRKCSH-211ENST00000590098 CFC1BP0CG36 223 aa9.64□□□□□ -0.87
PRKCSH-211ENST00000590098 SMIM11BQ8TCY0 68 aa9.64□□□□□ -0.87
PRKCSH-211ENST00000590098 TCL1BO95988 128 aa9.63□□□□□ -0.87
PRKCSH-211ENST00000590098 F8WEM9 126 aa9.61□□□□□ -0.87
PRKCSH-211ENST00000590098 RPL37P61927 97 aaKnown RBP9.61□□□□□ -0.87
PRKCSH-211ENST00000590098 VAMP3Q15836 100 aa9.61□□□□□ -0.87
PRKCSH-211ENST00000590098 SNRPEP62304 92 aaKnown RBP9.59□□□□□ -0.87
PRKCSH-211ENST00000590098 LINC00575Q6W349 94 aa9.55□□□□□ -0.88
PRKCSH-211ENST00000590098 M0R2T5 61 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms