RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 Q6ZVH6 145 aa9.72□□□□□ -0.85
DNMT1-221ENST00000589538 LINC00518Q8N0U6 118 aa9.72□□□□□ -0.85
DNMT1-221ENST00000589538 TRAV23DV6A0A075B6W5 121 aa9.71□□□□□ -0.86
DNMT1-221ENST00000589538 IFITM1P13164 125 aa9.71□□□□□ -0.86
DNMT1-221ENST00000589538 PPDPFQ9H3Y8 114 aa9.71□□□□□ -0.86
DNMT1-221ENST00000589538 C5orf52A6NGY3 159 aa9.7□□□□□ -0.86
DNMT1-221ENST00000589538 B5MCH6 92 aa9.7□□□□□ -0.86
DNMT1-221ENST00000589538 ANAPC11Q9NYG5 84 aa9.7□□□□□ -0.86
DNMT1-221ENST00000589538 HINT1P49773 126 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-221ENST00000589538 JOSD1Q15040 202 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-221ENST00000589538 PCP2Q8IVA1 136 aa9.69□□□□□ -0.86
DNMT1-221ENST00000589538 OR13C6PQ8NH95 151 aa9.69□□□□□ -0.86
DNMT1-221ENST00000589538 SMCR5Q8TEV8 140 aa9.69□□□□□ -0.86
DNMT1-221ENST00000589538 SPRR4Q96PI1 79 aa9.69□□□□□ -0.86
DNMT1-221ENST00000589538 Q6ZRX8 168 aa9.68□□□□□ -0.86
DNMT1-221ENST00000589538 ZNF73O43830 326 aaPredicted RBP9.67□□□□□ -0.86
DNMT1-221ENST00000589538 KRTAP13-2Q52LG2 175 aa9.67□□□□□ -0.86
DNMT1-221ENST00000589538 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
DNMT1-221ENST00000589538 SCGB1D1O95968 90 aa9.66□□□□□ -0.86
DNMT1-221ENST00000589538 CTAG1AP78358 180 aa9.64□□□□□ -0.87
DNMT1-221ENST00000589538 MUSTN1Q8IVN3 82 aa9.62□□□□□ -0.87
DNMT1-221ENST00000589538 Q9BRP9 147 aa9.62□□□□□ -0.87
DNMT1-221ENST00000589538 LINC00483Q53H64 154 aa9.61□□□□□ -0.87
DNMT1-221ENST00000589538 LINC00304Q8N9R0 145 aa9.61□□□□□ -0.87
DNMT1-221ENST00000589538 ERC2-IT1O76042 136 aa9.59□□□□□ -0.87
DNMT1-221ENST00000589538 TSPAN13O95857 204 aa9.59□□□□□ -0.87
DNMT1-221ENST00000589538 C3orf22Q8N5N4 141 aa9.59□□□□□ -0.87
DNMT1-221ENST00000589538 DHRS4-AS1Q9P1J3 65 aa9.59□□□□□ -0.87
DNMT1-221ENST00000589538 TRAV13-2A0A0B4J235 113 aa9.58□□□□□ -0.88
DNMT1-221ENST00000589538 GAGE2AQ6NT46 116 aa9.58□□□□□ -0.88
DNMT1-221ENST00000589538 SPAG11AQ6PDA7 123 aa9.58□□□□□ -0.88
DNMT1-221ENST00000589538 TRBV7-6A0A0J9YX20 115 aa9.57□□□□□ -0.88
DNMT1-221ENST00000589538 A6NDN8 102 aa9.57□□□□□ -0.88
DNMT1-221ENST00000589538 COX8AP10176 69 aa9.56□□□□□ -0.88
DNMT1-221ENST00000589538 COX7BP24311 80 aa9.56□□□□□ -0.88
DNMT1-221ENST00000589538 ELOF1P60002 83 aaKnown RBP9.56□□□□□ -0.88
DNMT1-221ENST00000589538 C6orf99Q4VX62 202 aa9.56□□□□□ -0.88
DNMT1-221ENST00000589538 DLEU1O43261 78 aa9.55□□□□□ -0.88
DNMT1-221ENST00000589538 PRR4Q16378 134 aa9.55□□□□□ -0.88
DNMT1-221ENST00000589538 C4orf48Q5BLP8 95 aa9.54□□□□□ -0.88
DNMT1-221ENST00000589538 A0A1B0GWB2 263 aa9.53□□□□□ -0.88
DNMT1-221ENST00000589538 SLC25A34Q6PIV7 304 aa9.52□□□□□ -0.89
DNMT1-221ENST00000589538 SSBP3-AS1Q7Z2R9 100 aa9.52□□□□□ -0.89
DNMT1-221ENST00000589538 A4D1N5 150 aa9.51□□□□□ -0.89
DNMT1-221ENST00000589538 HIST1H4GQ99525 98 aa9.51□□□□□ -0.89
DNMT1-221ENST00000589538 VAMP8Q9BV40 100 aa9.51□□□□□ -0.89
DNMT1-221ENST00000589538 IGLV9-49A0A0B4J1Y8 123 aa9.5□□□□□ -0.89
DNMT1-221ENST00000589538 Q8NBF4 154 aa9.5□□□□□ -0.89
DNMT1-221ENST00000589538 PAM16Q9Y3D7 125 aa9.5□□□□□ -0.89
DNMT1-221ENST00000589538 MOBPQ13875 183 aa9.49□□□□□ -0.89
DNMT1-221ENST00000589538 SPATA45Q537H7 98 aa9.49□□□□□ -0.89
DNMT1-221ENST00000589538 ST20-AS1Q8NBB2 130 aa9.48□□□□□ -0.89
DNMT1-221ENST00000589538 SMIM11BQ8TCY0 68 aa9.48□□□□□ -0.89
DNMT1-221ENST00000589538 SPINK1P00995 79 aa9.47□□□□□ -0.89
DNMT1-221ENST00000589538 SPRR1BP22528 89 aa9.47□□□□□ -0.89
DNMT1-221ENST00000589538 VAMP3Q15836 100 aa9.47□□□□□ -0.89
DNMT1-221ENST00000589538 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
DNMT1-221ENST00000589538 C14orf144Q96I85 54 aa9.47□□□□□ -0.89
DNMT1-221ENST00000589538 NHP2Q9NX24 153 aaKnown RBP9.47□□□□□ -0.89
DNMT1-221ENST00000589538 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
DNMT1-221ENST00000589538 C9orf153Q5TBE3 101 aa9.46□□□□□ -0.9
DNMT1-221ENST00000589538 TAL2Q16559 108 aa9.45□□□□□ -0.9
DNMT1-221ENST00000589538 LAMTOR3Q9UHA4 124 aa9.45□□□□□ -0.9
DNMT1-221ENST00000589538 LRP2P98164 4655 aa9.44□□□□□ -0.9
DNMT1-221ENST00000589538 SLC25A20O43772 301 aa9.44□□□□□ -0.9
DNMT1-221ENST00000589538 TEX49A0A1B0GTD5 131 aa9.43□□□□□ -0.9
DNMT1-221ENST00000589538 RPS29P62273 56 aaKnown RBP9.43□□□□□ -0.9
DNMT1-221ENST00000589538 TMA7Q9Y2S6 64 aaKnown RBP9.42□□□□□ -0.9
DNMT1-221ENST00000589538 RETNLBQ9BQ08 111 aa9.41□□□□□ -0.9
DNMT1-221ENST00000589538 DEFB105AQ8NG35 78 aa9.4□□□□□ -0.9
DNMT1-221ENST00000589538 UBR4Q5T4S7 5183 aa9.39□□□□□ -0.91
DNMT1-221ENST00000589538 FP248Q71RG6 208 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-221ENST00000589538 C12orf57Q99622 126 aa9.39□□□□□ -0.91
DNMT1-221ENST00000589538 IGLV5-48A0A075B6I7 105 aa9.38□□□□□ -0.91
DNMT1-221ENST00000589538 PYY3Q5JQD4 70 aa9.38□□□□□ -0.91
DNMT1-221ENST00000589538 BVES-AS1Q5T3Y7 98 aa9.38□□□□□ -0.91
DNMT1-221ENST00000589538 IGLV7-46A0A075B6I9 117 aa9.37□□□□□ -0.91
DNMT1-221ENST00000589538 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
DNMT1-221ENST00000589538 C2orf91Q6ZV80 131 aa9.37□□□□□ -0.91
DNMT1-221ENST00000589538 RAB37Q96AX2 223 aa9.37□□□□□ -0.91
DNMT1-221ENST00000589538 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
DNMT1-221ENST00000589538 A6NJY4 79 aa9.36□□□□□ -0.91
DNMT1-221ENST00000589538 CFC1BP0CG36 223 aa9.36□□□□□ -0.91
DNMT1-221ENST00000589538 CFC1P0CG37 223 aa9.36□□□□□ -0.91
DNMT1-221ENST00000589538 A0A0B4J2C4 111 aa9.35□□□□□ -0.91
DNMT1-221ENST00000589538 hADV29S1A0JD25 119 aa9.35□□□□□ -0.91
DNMT1-221ENST00000589538 TPRXLQ17RH7 258 aa9.35□□□□□ -0.91
DNMT1-221ENST00000589538 Q1RN00 199 aa9.35□□□□□ -0.91
DNMT1-221ENST00000589538 CEND1Q8N111 149 aa9.35□□□□□ -0.91
DNMT1-221ENST00000589538 LINC01547P58512 204 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-221ENST00000589538 LPAP08519 4548 aa9.34□□□□□ -0.91
DNMT1-221ENST00000589538 Q8N377 158 aa9.33□□□□□ -0.92
DNMT1-221ENST00000589538 PRO1933Q9H354 126 aa9.33□□□□□ -0.92
DNMT1-221ENST00000589538 LIMD2Q9BT23 127 aa9.32□□□□□ -0.92
DNMT1-221ENST00000589538 H7C2G1 150 aa9.31□□□□□ -0.92
DNMT1-221ENST00000589538 SNCGO76070 127 aa9.31□□□□□ -0.92
DNMT1-221ENST00000589538 CD164Q04900 197 aa9.31□□□□□ -0.92
DNMT1-221ENST00000589538 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
DNMT1-221ENST00000589538 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.3□□□□□ -0.92
DNMT1-221ENST00000589538 Q6ZQY7 126 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms