RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 SPRR1AP35321 89 aa12.25□□□□□ -0.45
DNMT1-216ENST00000588952 KRTAP4-16G5E9R7 235 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-216ENST00000588952 BVES-AS1Q5T3Y7 98 aa12.23□□□□□ -0.45
DNMT1-216ENST00000588952 SRRM2Q9UQ35 2752 aaKnown RBP12.23□□□□□ -0.45
DNMT1-216ENST00000588952 A0A0B4J2C4 111 aa12.22□□□□□ -0.45
DNMT1-216ENST00000588952 RPL13AP40429 203 aaKnown RBP12.22□□□□□ -0.45
DNMT1-216ENST00000588952 KRTAP13-1Q8IUC0 172 aa12.22□□□□□ -0.45
DNMT1-216ENST00000588952 TMEM238LA0A1B0GVL6 79 aa12.21□□□□□ -0.45
DNMT1-216ENST00000588952 A6NJY4 79 aa12.21□□□□□ -0.45
DNMT1-216ENST00000588952 PRLHP81277 87 aa12.21□□□□□ -0.45
DNMT1-216ENST00000588952 FAM19A1Q7Z5A9 133 aa12.21□□□□□ -0.45
DNMT1-216ENST00000588952 K7ERJ3 54 aa12.2□□□□□ -0.46
DNMT1-216ENST00000588952 ZNF73O43830 326 aaPredicted RBP12.2□□□□□ -0.46
DNMT1-216ENST00000588952 HINT1P49773 126 aaPredicted RBP12.2□□□□□ -0.46
DNMT1-216ENST00000588952 SMIM11BQ8TCY0 68 aa12.2□□□□□ -0.46
DNMT1-216ENST00000588952 NHP2Q9NX24 153 aaKnown RBP12.2□□□□□ -0.46
DNMT1-216ENST00000588952 RAB37Q96AX2 223 aa12.19□□□□□ -0.46
DNMT1-216ENST00000588952 A0A1B0GWB2 263 aa12.18□□□□□ -0.46
DNMT1-216ENST00000588952 ETDCA0A1B0GVM5 59 aa12.17□□□□□ -0.46
DNMT1-216ENST00000588952 B5MCH6 92 aa12.17□□□□□ -0.46
DNMT1-216ENST00000588952 ZNF861PO60384 105 aa12.17□□□□□ -0.46
DNMT1-216ENST00000588952 UBE2AP49459 152 aa12.17□□□□□ -0.46
DNMT1-216ENST00000588952 ABCA13Q86UQ4 5058 aa12.16□□□□□ -0.46
DNMT1-216ENST00000588952 H7C2G1 150 aa12.16□□□□□ -0.46
DNMT1-216ENST00000588952 C6orf99Q4VX62 202 aa12.16□□□□□ -0.46
DNMT1-216ENST00000588952 DIRC1Q969H9 104 aa12.16□□□□□ -0.46
DNMT1-216ENST00000588952 CBY1Q9Y3M2 126 aa12.16□□□□□ -0.46
DNMT1-216ENST00000588952 M0R143 59 aa12.14□□□□□ -0.47
DNMT1-216ENST00000588952 RPL28P46779 137 aaKnown RBP12.14□□□□□ -0.47
DNMT1-216ENST00000588952 PRO1854Q9UHT4 67 aa12.14□□□□□ -0.47
DNMT1-216ENST00000588952 H0Y9J4 135 aa12.12□□□□□ -0.47
DNMT1-216ENST00000588952 SPINK6Q6UWN8 80 aa12.12□□□□□ -0.47
DNMT1-216ENST00000588952 Q6ZRX8 168 aa12.12□□□□□ -0.47
DNMT1-216ENST00000588952 Q9BRP9 147 aa12.12□□□□□ -0.47
DNMT1-216ENST00000588952 SMCR5Q8TEV8 140 aa12.11□□□□□ -0.47
DNMT1-216ENST00000588952 INAFM2P0DMQ5 153 aa12.1□□□□□ -0.47
DNMT1-216ENST00000588952 COX7BP24311 80 aa12.1□□□□□ -0.47
DNMT1-216ENST00000588952 ELOF1P60002 83 aaKnown RBP12.1□□□□□ -0.47
DNMT1-216ENST00000588952 HIGD2AQ9BW72 106 aa12.09□□□□□ -0.47
DNMT1-216ENST00000588952 TRBV7-6A0A0J9YX20 115 aa12.08□□□□□ -0.48
DNMT1-216ENST00000588952 ERC2-IT1O76042 136 aa12.08□□□□□ -0.48
DNMT1-216ENST00000588952 BATFQ16520 125 aa12.08□□□□□ -0.48
DNMT1-216ENST00000588952 TSPAN13O95857 204 aa12.07□□□□□ -0.48
DNMT1-216ENST00000588952 Q1RN00 199 aa12.07□□□□□ -0.48
DNMT1-216ENST00000588952 PCP4L1A6NKN8 68 aa12.06□□□□□ -0.48
DNMT1-216ENST00000588952 FAT3Q8TDW7 4589 aa12.04□□□□□ -0.48
DNMT1-216ENST00000588952 TRIAP1O43715 76 aa12.03□□□□□ -0.48
DNMT1-216ENST00000588952 LRP1Q07954 4544 aaKnown RBP12.03□□□□□ -0.48
DNMT1-216ENST00000588952 SNHG12Q9BXW3 62 aa12.02□□□□□ -0.49
DNMT1-216ENST00000588952 MYCBP2O75592 4640 aa12.02□□□□□ -0.49
DNMT1-216ENST00000588952 FLG2Q5D862 2391 aaPredicted RBP12.01□□□□□ -0.49
DNMT1-216ENST00000588952 KRTAP1-4P0C5Y4 121 aa12.01□□□□□ -0.49
DNMT1-216ENST00000588952 DHRS4-AS1Q9P1J3 65 aa12□□□□□ -0.49
DNMT1-216ENST00000588952 VAMP3Q15836 100 aa11.99□□□□□ -0.49
DNMT1-216ENST00000588952 LINC00575Q6W349 94 aa11.99□□□□□ -0.49
DNMT1-216ENST00000588952 ST20-AS1Q8NBB2 130 aa11.98□□□□□ -0.49
DNMT1-216ENST00000588952 ANAPC11Q9NYG5 84 aa11.98□□□□□ -0.49
DNMT1-216ENST00000588952 FAM218AQ96MZ4 157 aa11.97□□□□□ -0.49
DNMT1-216ENST00000588952 SPRR4Q96PI1 79 aa11.97□□□□□ -0.49
DNMT1-216ENST00000588952 NAA38Q9BRA0 125 aaKnown RBP11.97□□□□□ -0.49
DNMT1-216ENST00000588952 PSMB2P49721 201 aa11.96□□□□□ -0.49
DNMT1-216ENST00000588952 H0YGX0 51 aa11.93□□□□□ -0.5
DNMT1-216ENST00000588952 TAX1BP3O14907 124 aa11.93□□□□□ -0.5
DNMT1-216ENST00000588952 CLEC2BQ92478 149 aa11.93□□□□□ -0.5
DNMT1-216ENST00000588952 PCLOQ9Y6V0 5065 aa11.93□□□□□ -0.5
DNMT1-216ENST00000588952 hADV29S1A0JD25 119 aa11.92□□□□□ -0.5
DNMT1-216ENST00000588952 GAGE2AQ6NT46 116 aa11.91□□□□□ -0.5
DNMT1-216ENST00000588952 ZNF706Q9Y5V0 76 aaPredicted RBP11.91□□□□□ -0.5
DNMT1-216ENST00000588952 SLC25A20O43772 301 aa11.9□□□□□ -0.5
DNMT1-216ENST00000588952 LINC01600Q96MT4 127 aa11.9□□□□□ -0.5
DNMT1-216ENST00000588952 A0A087X002 238 aa11.89□□□□□ -0.51
DNMT1-216ENST00000588952 LINC01547P58512 204 aaPredicted RBP11.89□□□□□ -0.51
DNMT1-216ENST00000588952 LINC00483Q53H64 154 aa11.89□□□□□ -0.51
DNMT1-216ENST00000588952 PRR26Q8N8Z3 221 aa11.88□□□□□ -0.51
DNMT1-216ENST00000588952 TNXBP22105 4242 aa11.88□□□□□ -0.51
DNMT1-216ENST00000588952 COX6CP09669 75 aa11.87□□□□□ -0.51
DNMT1-216ENST00000588952 Q6ZQY7 126 aa11.87□□□□□ -0.51
DNMT1-216ENST00000588952 KRTAP29-1A8MX34 341 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-216ENST00000588952 H3BUT2 72 aa11.86□□□□□ -0.51
DNMT1-216ENST00000588952 OXTP01178 125 aa11.86□□□□□ -0.51
DNMT1-216ENST00000588952 SCGB1C2P0DMR2 95 aa11.86□□□□□ -0.51
DNMT1-216ENST00000588952 DEFB105AQ8NG35 78 aa11.86□□□□□ -0.51
DNMT1-216ENST00000588952 IGLV5-48A0A075B6I7 105 aa11.85□□□□□ -0.51
DNMT1-216ENST00000588952 C9orf118A6NHY6 69 aa11.85□□□□□ -0.51
DNMT1-216ENST00000588952 MT1HL1P0DM35 61 aa11.85□□□□□ -0.51
DNMT1-216ENST00000588952 FAM229BQ4G0N7 80 aa11.85□□□□□ -0.51
DNMT1-216ENST00000588952 KRTAP13-2Q52LG2 175 aa11.85□□□□□ -0.51
DNMT1-216ENST00000588952 COL5A1-AS1Q5SY13 56 aa11.85□□□□□ -0.51
DNMT1-216ENST00000588952 SPRR1BP22528 89 aa11.84□□□□□ -0.51
DNMT1-216ENST00000588952 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.83□□□□□ -0.52
DNMT1-216ENST00000588952 Q8N377 158 aa11.83□□□□□ -0.52
DNMT1-216ENST00000588952 A0A1B0GX51 115 aa11.82□□□□□ -0.52
DNMT1-216ENST00000588952 KRTAP10-8P60410 259 aa11.82□□□□□ -0.52
DNMT1-216ENST00000588952 C3orf22Q8N5N4 141 aa11.82□□□□□ -0.52
DNMT1-216ENST00000588952 LST1O00453 97 aa11.81□□□□□ -0.52
DNMT1-216ENST00000588952 CRYGAP11844 174 aa11.81□□□□□ -0.52
DNMT1-216ENST00000588952 TEX49A0A1B0GTD5 131 aa11.8□□□□□ -0.52
DNMT1-216ENST00000588952 TCL1BO95988 128 aa11.8□□□□□ -0.52
DNMT1-216ENST00000588952 SMIM29Q86T20 159 aa11.8□□□□□ -0.52
DNMT1-216ENST00000588952 A0A1W2PPM0 123 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms