RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 TRAV23DV6A0A075B6W5 121 aa6.09□□□□□ -1.43
TPM4-209ENST00000588483 S100A7L2Q5SY68 101 aa6.09□□□□□ -1.43
TPM4-209ENST00000588483 Q9BRP9 147 aa6.09□□□□□ -1.43
TPM4-209ENST00000588483 TTTY13Q9BZ97 58 aa6.09□□□□□ -1.43
TPM4-209ENST00000588483 CBY1Q9Y3M2 126 aa6.09□□□□□ -1.43
TPM4-209ENST00000588483 TSPAN13O95857 204 aa6.08□□□□□ -1.44
TPM4-209ENST00000588483 NPC2P61916 151 aa6.08□□□□□ -1.44
TPM4-209ENST00000588483 ANKRD39Q53RE8 183 aa6.08□□□□□ -1.44
TPM4-209ENST00000588483 C3orf22Q8N5N4 141 aa6.08□□□□□ -1.44
TPM4-209ENST00000588483 SPANXDQ9BXN6 97 aa6.08□□□□□ -1.44
TPM4-209ENST00000588483 ZNF73O43830 326 aaPredicted RBP6.07□□□□□ -1.44
TPM4-209ENST00000588483 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
TPM4-209ENST00000588483 HIST3H2BBQ8N257 126 aa6.07□□□□□ -1.44
TPM4-209ENST00000588483 C5orf52A6NGY3 159 aa6.06□□□□□ -1.44
TPM4-209ENST00000588483 ERC2-IT1O76042 136 aa6.06□□□□□ -1.44
TPM4-209ENST00000588483 JOSD1Q15040 202 aaPredicted RBP6.06□□□□□ -1.44
TPM4-209ENST00000588483 PRR4Q16378 134 aa6.06□□□□□ -1.44
TPM4-209ENST00000588483 SPAG11AQ6PDA7 123 aa6.06□□□□□ -1.44
TPM4-209ENST00000588483 Q6ZVH6 145 aa6.06□□□□□ -1.44
TPM4-209ENST00000588483 LINC00518Q8N0U6 118 aa6.06□□□□□ -1.44
TPM4-209ENST00000588483 HIST1H2BLQ99880 126 aa6.06□□□□□ -1.44
TPM4-209ENST00000588483 IFITM1P13164 125 aa6.05□□□□□ -1.44
TPM4-209ENST00000588483 COPS9Q8WXC6 57 aa6.05□□□□□ -1.44
TPM4-209ENST00000588483 SCGB1D4Q6XE38 83 aa6.04□□□□□ -1.44
TPM4-209ENST00000588483 ATOH7Q8N100 152 aa6.04□□□□□ -1.44
TPM4-209ENST00000588483 PCP2Q8IVA1 136 aa6.03□□□□□ -1.44
TPM4-209ENST00000588483 MUC2Q02817 5179 aa6.02□□□□□ -1.45
TPM4-209ENST00000588483 S100A2P29034 98 aa6.02□□□□□ -1.45
TPM4-209ENST00000588483 HINT1P49773 126 aaPredicted RBP6.02□□□□□ -1.45
TPM4-209ENST00000588483 GAGE2AQ6NT46 116 aa6.02□□□□□ -1.45
TPM4-209ENST00000588483 S100A6P06703 90 aa6.01□□□□□ -1.45
TPM4-209ENST00000588483 RPS29P62273 56 aaKnown RBP6.01□□□□□ -1.45
TPM4-209ENST00000588483 SSBP3-AS1Q7Z2R9 100 aa6.01□□□□□ -1.45
TPM4-209ENST00000588483 Q8NBF4 154 aa6.01□□□□□ -1.45
TPM4-209ENST00000588483 OR13C6PQ8NH95 151 aa6.01□□□□□ -1.45
TPM4-209ENST00000588483 DHRS4-AS1Q9P1J3 65 aa6.01□□□□□ -1.45
TPM4-209ENST00000588483 TRBV7-6A0A0J9YX20 115 aa6□□□□□ -1.45
TPM4-209ENST00000588483 SPINK1P00995 79 aa6□□□□□ -1.45
TPM4-209ENST00000588483 SPRR1BP22528 89 aa6□□□□□ -1.45
TPM4-209ENST00000588483 ELOF1P60002 83 aaKnown RBP6□□□□□ -1.45
TPM4-209ENST00000588483 TPRXLQ17RH7 258 aa6□□□□□ -1.45
TPM4-209ENST00000588483 RETNLBQ9BQ08 111 aa5.99□□□□□ -1.45
TPM4-209ENST00000588483 MUC17Q685J3 4493 aa5.98□□□□□ -1.45
TPM4-209ENST00000588483 MOBPQ13875 183 aa5.98□□□□□ -1.45
TPM4-209ENST00000588483 C6orf99Q4VX62 202 aa5.98□□□□□ -1.45
TPM4-209ENST00000588483 C4orf48Q5BLP8 95 aa5.98□□□□□ -1.45
TPM4-209ENST00000588483 FP248Q71RG6 208 aaPredicted RBP5.98□□□□□ -1.45
TPM4-209ENST00000588483 MUSTN1Q8IVN3 82 aa5.98□□□□□ -1.45
TPM4-209ENST00000588483 IGLV9-49A0A0B4J1Y8 123 aa5.97□□□□□ -1.45
TPM4-209ENST00000588483 HSBP1L1C9JCN9 74 aa5.97□□□□□ -1.45
TPM4-209ENST00000588483 COX7BP24311 80 aa5.97□□□□□ -1.45
TPM4-209ENST00000588483 ST20-AS1Q8NBB2 130 aa5.97□□□□□ -1.45
TPM4-209ENST00000588483 IGLV7-46A0A075B6I9 117 aa5.96□□□□□ -1.46
TPM4-209ENST00000588483 TRAV13-2A0A0B4J235 113 aa5.96□□□□□ -1.46
TPM4-209ENST00000588483 A0A1B0GWB2 263 aa5.96□□□□□ -1.46
TPM4-209ENST00000588483 SLC25A34Q6PIV7 304 aa5.95□□□□□ -1.46
TPM4-209ENST00000588483 A4D1N5 150 aa5.94□□□□□ -1.46
TPM4-209ENST00000588483 A6NDN8 102 aa5.94□□□□□ -1.46
TPM4-209ENST00000588483 Q8N377 158 aa5.94□□□□□ -1.46
TPM4-209ENST00000588483 IGLV5-48A0A075B6I7 105 aa5.92□□□□□ -1.46
TPM4-209ENST00000588483 DLEU1O43261 78 aa5.92□□□□□ -1.46
TPM4-209ENST00000588483 COX8AP10176 69 aa5.92□□□□□ -1.46
TPM4-209ENST00000588483 C9orf153Q5TBE3 101 aa5.92□□□□□ -1.46
TPM4-209ENST00000588483 TEX49A0A1B0GTD5 131 aa5.91□□□□□ -1.46
TPM4-209ENST00000588483 SLC25A20O43772 301 aa5.91□□□□□ -1.46
TPM4-209ENST00000588483 SCGB1D1O95968 90 aa5.91□□□□□ -1.46
TPM4-209ENST00000588483 LINC01547P58512 204 aaPredicted RBP5.91□□□□□ -1.46
TPM4-209ENST00000588483 KRTAP13-3Q3SY46 172 aa5.91□□□□□ -1.46
TPM4-209ENST00000588483 SMIM11BQ8TCY0 68 aa5.91□□□□□ -1.46
TPM4-209ENST00000588483 CDIP1Q9H305 208 aa5.91□□□□□ -1.46
TPM4-209ENST00000588483 LAMTOR3Q9UHA4 124 aa5.91□□□□□ -1.46
TPM4-209ENST00000588483 NHP2Q9NX24 153 aaKnown RBP5.9□□□□□ -1.46
TPM4-209ENST00000588483 SMIM29Q86T20 159 aa5.89□□□□□ -1.47
TPM4-209ENST00000588483 CD164Q04900 197 aa5.88□□□□□ -1.47
TPM4-209ENST00000588483 TAL2Q16559 108 aa5.88□□□□□ -1.47
TPM4-209ENST00000588483 HIGD1BQ9P298 99 aa5.87□□□□□ -1.47
TPM4-209ENST00000588483 VAMP3Q15836 100 aa5.86□□□□□ -1.47
TPM4-209ENST00000588483 Q5XG85 94 aa5.86□□□□□ -1.47
TPM4-209ENST00000588483 LINC00575Q6W349 94 aa5.86□□□□□ -1.47
TPM4-209ENST00000588483 DEFB105AQ8NG35 78 aa5.86□□□□□ -1.47
TPM4-209ENST00000588483 HIST1H4GQ99525 98 aa5.86□□□□□ -1.47
TPM4-209ENST00000588483 LIMD2Q9BT23 127 aa5.86□□□□□ -1.47
TPM4-209ENST00000588483 PRO1933Q9H354 126 aa5.86□□□□□ -1.47
TPM4-209ENST00000588483 Q1RN00 199 aa5.85□□□□□ -1.47
TPM4-209ENST00000588483 SPATA45Q537H7 98 aa5.84□□□□□ -1.47
TPM4-209ENST00000588483 PAM16Q9Y3D7 125 aa5.84□□□□□ -1.47
TPM4-209ENST00000588483 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
TPM4-209ENST00000588483 A0A0U1RQV1 116 aa5.83□□□□□ -1.48
TPM4-209ENST00000588483 BVES-AS1Q5T3Y7 98 aa5.83□□□□□ -1.48
TPM4-209ENST00000588483 C2orf91Q6ZV80 131 aa5.83□□□□□ -1.48
TPM4-209ENST00000588483 C14orf144Q96I85 54 aa5.83□□□□□ -1.48
TPM4-209ENST00000588483 VAMP8Q9BV40 100 aa5.83□□□□□ -1.48
TPM4-209ENST00000588483 hADV29S1A0JD25 119 aa5.82□□□□□ -1.48
TPM4-209ENST00000588483 CFC1BP0CG36 223 aa5.82□□□□□ -1.48
TPM4-209ENST00000588483 CFC1P0CG37 223 aa5.82□□□□□ -1.48
TPM4-209ENST00000588483 ASB16-AS1Q495Z4 193 aa5.82□□□□□ -1.48
TPM4-209ENST00000588483 IGLV8-61A0A075B6I0 122 aa5.81□□□□□ -1.48
TPM4-209ENST00000588483 A0A0B4J2C4 111 aa5.81□□□□□ -1.48
TPM4-209ENST00000588483 H7C2G1 150 aa5.81□□□□□ -1.48
TPM4-209ENST00000588483 XP32Q5T750 250 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms