RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 TRAPPC1Q9Y5R8 145 aa7.43□□□□□ -1.22
CLPTM1-208ENST00000588274 C9orf153Q5TBE3 101 aa7.42□□□□□ -1.22
CLPTM1-208ENST00000588274 IFI27L1Q96BM0 104 aa7.42□□□□□ -1.22
CLPTM1-208ENST00000588274 EIF4EBP3O60516 100 aaPredicted RBP7.41□□□□□ -1.22
CLPTM1-208ENST00000588274 SPANXB1Q9NS25 103 aaPredicted RBP7.41□□□□□ -1.22
CLPTM1-208ENST00000588274 C9orf92A6NGG3 77 aa7.4□□□□□ -1.22
CLPTM1-208ENST00000588274 USH2AO75445 5202 aa7.39□□□□□ -1.23
CLPTM1-208ENST00000588274 MYMXA0A1B0GTQ4 84 aa7.39□□□□□ -1.23
CLPTM1-208ENST00000588274 LINC00587B1AMM8 73 aa7.39□□□□□ -1.23
CLPTM1-208ENST00000588274 SPRR1BP22528 89 aa7.39□□□□□ -1.23
CLPTM1-208ENST00000588274 SOSTDC1Q6X4U4 206 aa7.39□□□□□ -1.23
CLPTM1-208ENST00000588274 SSPOA2VEC9 5147 aa7.39□□□□□ -1.23
CLPTM1-208ENST00000588274 TRAV23DV6A0A075B6W5 121 aa7.38□□□□□ -1.23
CLPTM1-208ENST00000588274 NDUFC2O95298 119 aa7.38□□□□□ -1.23
CLPTM1-208ENST00000588274 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
CLPTM1-208ENST00000588274 ZNF73O43830 326 aaPredicted RBP7.37□□□□□ -1.23
CLPTM1-208ENST00000588274 CHCHD1Q96BP2 118 aaKnown RBP7.37□□□□□ -1.23
CLPTM1-208ENST00000588274 C5orf52A6NGY3 159 aa7.36□□□□□ -1.23
CLPTM1-208ENST00000588274 YPEL4Q96NS1 127 aa7.36□□□□□ -1.23
CLPTM1-208ENST00000588274 LEPROTO15243 131 aa7.35□□□□□ -1.23
CLPTM1-208ENST00000588274 JOSD1Q15040 202 aaPredicted RBP7.35□□□□□ -1.23
CLPTM1-208ENST00000588274 LIMD2Q9BT23 127 aa7.35□□□□□ -1.23
CLPTM1-208ENST00000588274 HRCT1Q6UXD1 115 aa7.34□□□□□ -1.23
CLPTM1-208ENST00000588274 C12orf57Q99622 126 aa7.34□□□□□ -1.23
CLPTM1-208ENST00000588274 J3QQQ9 107 aa7.33□□□□□ -1.24
CLPTM1-208ENST00000588274 LINC00310P59036 64 aa7.33□□□□□ -1.24
CLPTM1-208ENST00000588274 S100A7L2Q5SY68 101 aa7.33□□□□□ -1.24
CLPTM1-208ENST00000588274 COLCA2A8K830 154 aa7.32□□□□□ -1.24
CLPTM1-208ENST00000588274 ADAMTSL4-AS1Q5T5F5 129 aa7.32□□□□□ -1.24
CLPTM1-208ENST00000588274 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
CLPTM1-208ENST00000588274 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
CLPTM1-208ENST00000588274 Q5XG85 94 aa7.3□□□□□ -1.24
CLPTM1-208ENST00000588274 MIEN1Q9BRT3 115 aa7.3□□□□□ -1.24
CLPTM1-208ENST00000588274 KRTAP9-7A8MTY7 169 aa7.29□□□□□ -1.24
CLPTM1-208ENST00000588274 M0R2T5 61 aa7.29□□□□□ -1.24
CLPTM1-208ENST00000588274 SMIM6P0DI80 62 aa7.29□□□□□ -1.24
CLPTM1-208ENST00000588274 NMUP48645 174 aa7.29□□□□□ -1.24
CLPTM1-208ENST00000588274 H0Y8G0 127 aa7.28□□□□□ -1.24
CLPTM1-208ENST00000588274 PLNP26678 52 aa7.28□□□□□ -1.24
CLPTM1-208ENST00000588274 AKR1D1P51857 326 aa7.28□□□□□ -1.24
CLPTM1-208ENST00000588274 NPC2P61916 151 aa7.28□□□□□ -1.24
CLPTM1-208ENST00000588274 CD164Q04900 197 aa7.28□□□□□ -1.24
CLPTM1-208ENST00000588274 C1orf195Q5TG92 126 aa7.28□□□□□ -1.24
CLPTM1-208ENST00000588274 LITAFQ99732 161 aa7.28□□□□□ -1.24
CLPTM1-208ENST00000588274 A0A0J9YXY3 114 aa7.27□□□□□ -1.25
CLPTM1-208ENST00000588274 PCP4P48539 62 aa7.27□□□□□ -1.25
CLPTM1-208ENST00000588274 PMCHL2Q9BQD1 86 aa7.27□□□□□ -1.25
CLPTM1-208ENST00000588274 HSBP1O75506 76 aa7.26□□□□□ -1.25
CLPTM1-208ENST00000588274 H7C2G1 150 aa7.25□□□□□ -1.25
CLPTM1-208ENST00000588274 ELOF1P60002 83 aaKnown RBP7.25□□□□□ -1.25
CLPTM1-208ENST00000588274 SLC25A34Q6PIV7 304 aa7.25□□□□□ -1.25
CLPTM1-208ENST00000588274 SMIM29Q86T20 159 aa7.25□□□□□ -1.25
CLPTM1-208ENST00000588274 DHRS4-AS1Q9P1J3 65 aa7.25□□□□□ -1.25
CLPTM1-208ENST00000588274 LGALS3P17931 250 aaKnown RBP7.24□□□□□ -1.25
CLPTM1-208ENST00000588274 Q1RN00 199 aa7.24□□□□□ -1.25
CLPTM1-208ENST00000588274 LAMTOR3Q9UHA4 124 aa7.24□□□□□ -1.25
CLPTM1-208ENST00000588274 A0A0G2JQZ4 141 aa7.23□□□□□ -1.25
CLPTM1-208ENST00000588274 DPM2O94777 84 aa7.23□□□□□ -1.25
CLPTM1-208ENST00000588274 LEPROTL1O95214 131 aa7.23□□□□□ -1.25
CLPTM1-208ENST00000588274 TRGC2P03986 189 aa7.23□□□□□ -1.25
CLPTM1-208ENST00000588274 COX6B2Q6YFQ2 88 aa7.23□□□□□ -1.25
CLPTM1-208ENST00000588274 SPANXCQ9NY87 97 aa7.23□□□□□ -1.25
CLPTM1-208ENST00000588274 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
CLPTM1-208ENST00000588274 SERF1AO75920 110 aa7.22□□□□□ -1.25
CLPTM1-208ENST00000588274 IGKCP01834 107 aa7.22□□□□□ -1.25
CLPTM1-208ENST00000588274 LINC00308Q8TCZ7 52 aa7.22□□□□□ -1.25
CLPTM1-208ENST00000588274 PRO1933Q9H354 126 aa7.22□□□□□ -1.25
CLPTM1-208ENST00000588274 E9PLD3 99 aa7.21□□□□□ -1.26
CLPTM1-208ENST00000588274 HERVK_113P61574 105 aa7.21□□□□□ -1.26
CLPTM1-208ENST00000588274 HINT1P49773 126 aaPredicted RBP7.2□□□□□ -1.26
CLPTM1-208ENST00000588274 SPANXDQ9BXN6 97 aa7.2□□□□□ -1.26
CLPTM1-208ENST00000588274 IGLV5-48A0A075B6I7 105 aa7.19□□□□□ -1.26
CLPTM1-208ENST00000588274 HSBP1L1C9JCN9 74 aa7.19□□□□□ -1.26
CLPTM1-208ENST00000588274 C6orf99Q4VX62 202 aa7.19□□□□□ -1.26
CLPTM1-208ENST00000588274 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
CLPTM1-208ENST00000588274 COX7BP24311 80 aa7.18□□□□□ -1.26
CLPTM1-208ENST00000588274 TEX49A0A1B0GTD5 131 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST1H2BKO60814 126 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST1H2BJP06899 126 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST1H2BOP23527 126 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST1H2BBP33778 126 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST1H2BDP58876 126 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST1H2BCP62807 126 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST2H2BEQ16778 126 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 DEFB105AQ8NG35 78 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 OR13C6PQ8NH95 151 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST1H2BHQ93079 126 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST1H2BNQ99877 126 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 HIST1H2BMQ99879 126 aa7.17□□□□□ -1.26
CLPTM1-208ENST00000588274 TIMM17BO60830 172 aa7.16□□□□□ -1.26
CLPTM1-208ENST00000588274 FABP4P15090 132 aa7.16□□□□□ -1.26
CLPTM1-208ENST00000588274 TAL2Q16559 108 aa7.15□□□□□ -1.26
CLPTM1-208ENST00000588274 C21orf62-AS1Q17RA5 79 aa7.15□□□□□ -1.26
CLPTM1-208ENST00000588274 HSPB8Q9UJY1 196 aa7.15□□□□□ -1.26
CLPTM1-208ENST00000588274 MACF1Q9UPN3 7388 aaKnown RBP7.14□□□□□ -1.27
CLPTM1-208ENST00000588274 TRBV7-6A0A0J9YX20 115 aa7.13□□□□□ -1.27
CLPTM1-208ENST00000588274 TTTY13Q9BZ97 58 aa7.13□□□□□ -1.27
CLPTM1-208ENST00000588274 SYNE2Q8WXH0 6885 aaKnown RBP7.12□□□□□ -1.27
CLPTM1-208ENST00000588274 SNRPEP62304 92 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms