RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 RAB5BP61020 215 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST1H2BCP62807 126 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 SYCNQ0VAF6 134 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 PMVKQ15126 192 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST2H2BEQ16778 126 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.28□□□□□ -2.04
VMP1-205ENST00000587470 Q6ZRU5 148 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 SCXQ7RTU7 201 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 BOD1L2Q8IYS8 172 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 FAM19A2Q8N3H0 131 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST1H2BHQ93079 126 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST1H2BNQ99877 126 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST1H2BMQ99879 126 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 C8orf17Q9NRJ1 99 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 CDKN2A-AS1Q9UH64 79 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.27□□□□□ -2.05
VMP1-205ENST00000587470 IGHV6-1A0A0B4J1U7 121 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 C11orf86A6NJI1 115 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.27□□□□□ -2.05
VMP1-205ENST00000587470 IGLC3P0DOY3 106 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 KRTAP10-4P60372 401 aaPredicted RBP2.27□□□□□ -2.05
VMP1-205ENST00000587470 HERVK_113P63121 156 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 SEC11AP67812 179 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 SPAG11BQ08648 103 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 DEFB116Q30KQ4 102 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 UNQ6190/PRO20217Q6UXQ8 127 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 BAGE3Q86Y29 109 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 OR10D4PQ8NGN7 298 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 CIRBP-AS1Q8TBR5 109 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 ORAOV1Q8WV07 137 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 C2orf88Q9BSF0 95 aa2.27□□□□□ -2.05
VMP1-205ENST00000587470 MRPL35Q9NZE8 188 aaKnown RBP2.27□□□□□ -2.05
VMP1-205ENST00000587470 A0A096LNI7 61 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 TRAV12-1A0A0B4J245 112 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 A0A1W2PNN7 141 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 TMEM223A0PJW6 202 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 APOMO95445 188 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 ZNF22P17026 224 aaPredicted RBP2.26□□□□□ -2.05
VMP1-205ENST00000587470 PSMB2P49721 201 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 C2orf82Q6UX34 121 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 SPACA4Q8TDM5 124 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 IFI27L1Q96BM0 104 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 CARD19Q96LW7 228 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 PLAC8Q9NZF1 115 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 C6orf48Q9UBA6 75 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 PRO0628Q9UI54 55 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 LRP1Q07954 4544 aaKnown RBP2.26□□□□□ -2.05
VMP1-205ENST00000587470 MUC2Q02817 5179 aa2.26□□□□□ -2.05
VMP1-205ENST00000587470 F8VRH5 84 aa2.25□□□□□ -2.05
VMP1-205ENST00000587470 LEPROTL1O95214 131 aa2.25□□□□□ -2.05
VMP1-205ENST00000587470 SPINK8P0C7L1 97 aa2.25□□□□□ -2.05
VMP1-205ENST00000587470 NDUFA6P56556 154 aa2.25□□□□□ -2.05
VMP1-205ENST00000587470 C9orf116Q5BN46 136 aaPredicted RBP2.25□□□□□ -2.05
VMP1-205ENST00000587470 Q5W150 140 aa2.25□□□□□ -2.05
VMP1-205ENST00000587470 Q8IZM0 81 aa2.25□□□□□ -2.05
VMP1-205ENST00000587470 LINC00337Q8N6G1 96 aa2.25□□□□□ -2.05
VMP1-205ENST00000587470 IGKV2-24A0A0C4DH68 120 aa2.24□□□□□ -2.05
VMP1-205ENST00000587470 TRBV30A0A0K0K1B3 111 aa2.24□□□□□ -2.05
VMP1-205ENST00000587470 LOC107984640A0A0U1RRK4 108 aa2.24□□□□□ -2.05
VMP1-205ENST00000587470 NDUFA1O15239 70 aa2.24□□□□□ -2.05
VMP1-205ENST00000587470 FABP4P15090 132 aa2.24□□□□□ -2.05
VMP1-205ENST00000587470 COX7B2Q8TF08 81 aa2.24□□□□□ -2.05
VMP1-205ENST00000587470 ZNF625Q96I27 306 aaPredicted RBP2.24□□□□□ -2.05
VMP1-205ENST00000587470 PACRGQ96M98 296 aaPredicted RBP2.24□□□□□ -2.05
VMP1-205ENST00000587470 TOMM7Q9P0U1 55 aa2.24□□□□□ -2.05
VMP1-205ENST00000587470 HSPB8Q9UJY1 196 aa2.24□□□□□ -2.05
VMP1-205ENST00000587470 FAT4Q6V0I7 4981 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 FSIP2Q5CZC0 6907 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 H3BRM9 83 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 SYS1-DBNDD2H3BUS1 97 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 C3orf79P0CE67 100 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 CKS1BP61024 79 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 TMEM170BQ5T4T1 132 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 LINC01545Q5VT33 79 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 PMCHL2Q9BQD1 86 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 LINC00474Q9P2X8 69 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 FAT3Q8TDW7 4589 aa2.23□□□□□ -2.05
VMP1-205ENST00000587470 DPM2O94777 84 aa2.22□□□□□ -2.05
VMP1-205ENST00000587470 TSPEAR-AS2P59090 65 aa2.22□□□□□ -2.05
VMP1-205ENST00000587470 HIST3H2BBQ8N257 126 aa2.22□□□□□ -2.05
VMP1-205ENST00000587470 Q8NDZ9 215 aa2.22□□□□□ -2.05
VMP1-205ENST00000587470 DPH3Q96FX2 82 aa2.22□□□□□ -2.05
VMP1-205ENST00000587470 HIST1H2BLQ99880 126 aa2.22□□□□□ -2.05
VMP1-205ENST00000587470 XAGE1AQ9HD64 81 aa2.22□□□□□ -2.05
VMP1-205ENST00000587470 PKIGQ9Y2B9 76 aa2.22□□□□□ -2.05
VMP1-205ENST00000587470 IGKCP01834 107 aa2.21□□□□□ -2.06
VMP1-205ENST00000587470 MT1HL1P0DM35 61 aa2.21□□□□□ -2.06
VMP1-205ENST00000587470 PLNP26678 52 aa2.21□□□□□ -2.06
VMP1-205ENST00000587470 PHF5AQ7RTV0 110 aaKnown RBP2.21□□□□□ -2.06
VMP1-205ENST00000587470 SND1-IT1Q9HBX3 110 aa2.21□□□□□ -2.06
VMP1-205ENST00000587470 PKHD1L1Q86WI1 4243 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 IGKV2D-26A0A0A0MRZ7 120 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 LOC107984156A0A0G2JMH3 177 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 J3QQQ9 107 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 LEPROTO15243 131 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 KRTDAPP60985 99 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 RPL37AP61513 92 aaKnown RBP2.2□□□□□ -2.06
VMP1-205ENST00000587470 COX17Q14061 63 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 ARL17AQ8IVW1 177 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 PLEKHB2Q96CS7 222 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms