RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SOSTDC1Q6X4U4 206 aa6.38□□□□□ -1.39
BRCA1-225ENST00000586385 CHCHD1Q96BP2 118 aaKnown RBP6.38□□□□□ -1.39
BRCA1-225ENST00000586385 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-225ENST00000586385 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-225ENST00000586385 S100A12P80511 92 aa6.37□□□□□ -1.39
BRCA1-225ENST00000586385 COA6Q5JTJ3 125 aaKnown RBP6.37□□□□□ -1.39
BRCA1-225ENST00000586385 MAP1LC3CQ9BXW4 147 aa6.37□□□□□ -1.39
BRCA1-225ENST00000586385 TRAV23DV6A0A075B6W5 121 aa6.36□□□□□ -1.39
BRCA1-225ENST00000586385 HRCT1Q6UXD1 115 aa6.36□□□□□ -1.39
BRCA1-225ENST00000586385 ZNF73O43830 326 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST1H2BKO60814 126 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 NDUFC2O95298 119 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST1H2BJP06899 126 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 SPRR1BP22528 89 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST1H2BOP23527 126 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST1H2BBP33778 126 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST1H2BDP58876 126 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST1H2BCP62807 126 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST2H2BEQ16778 126 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST1H2BHQ93079 126 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST1H2BNQ99877 126 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 HIST1H2BMQ99879 126 aa6.35□□□□□ -1.39
BRCA1-225ENST00000586385 LEPROTO15243 131 aa6.34□□□□□ -1.39
BRCA1-225ENST00000586385 HSBP1O75506 76 aa6.34□□□□□ -1.39
BRCA1-225ENST00000586385 JOSD1Q15040 202 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-225ENST00000586385 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
BRCA1-225ENST00000586385 ADAMTSL4-AS1Q5T5F5 129 aa6.33□□□□□ -1.4
BRCA1-225ENST00000586385 HSPB8Q9UJY1 196 aa6.33□□□□□ -1.4
BRCA1-225ENST00000586385 TMA7Q9Y2S6 64 aaKnown RBP6.33□□□□□ -1.4
BRCA1-225ENST00000586385 C5orf52A6NGY3 159 aa6.32□□□□□ -1.4
BRCA1-225ENST00000586385 J3QQQ9 107 aa6.32□□□□□ -1.4
BRCA1-225ENST00000586385 LIMD2Q9BT23 127 aa6.32□□□□□ -1.4
BRCA1-225ENST00000586385 H0Y8G0 127 aa6.31□□□□□ -1.4
BRCA1-225ENST00000586385 M0R2T5 61 aa6.31□□□□□ -1.4
BRCA1-225ENST00000586385 LINC00310P59036 64 aa6.3□□□□□ -1.4
BRCA1-225ENST00000586385 NPC2P61916 151 aa6.3□□□□□ -1.4
BRCA1-225ENST00000586385 C20orf202A1L168 122 aa6.29□□□□□ -1.4
BRCA1-225ENST00000586385 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-225ENST00000586385 RPL37P61927 97 aaKnown RBP6.29□□□□□ -1.4
BRCA1-225ENST00000586385 MIEN1Q9BRT3 115 aa6.29□□□□□ -1.4
BRCA1-225ENST00000586385 NMUP48645 174 aa6.28□□□□□ -1.4
BRCA1-225ENST00000586385 SNRPEP62304 92 aaKnown RBP6.28□□□□□ -1.4
BRCA1-225ENST00000586385 C1orf195Q5TG92 126 aa6.28□□□□□ -1.4
BRCA1-225ENST00000586385 PMCHL2Q9BQD1 86 aa6.28□□□□□ -1.4
BRCA1-225ENST00000586385 A0A0G2JQZ4 141 aa6.27□□□□□ -1.41
BRCA1-225ENST00000586385 A0A0J9YXY3 114 aa6.27□□□□□ -1.41
BRCA1-225ENST00000586385 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
BRCA1-225ENST00000586385 H7C2G1 150 aa6.27□□□□□ -1.41
BRCA1-225ENST00000586385 SERF1AO75920 110 aa6.27□□□□□ -1.41
BRCA1-225ENST00000586385 LEPROTL1O95214 131 aa6.27□□□□□ -1.41
BRCA1-225ENST00000586385 CD164Q04900 197 aa6.27□□□□□ -1.41
BRCA1-225ENST00000586385 Q5XG85 94 aa6.27□□□□□ -1.41
BRCA1-225ENST00000586385 LITAFQ99732 161 aa6.27□□□□□ -1.41
BRCA1-225ENST00000586385 LGALS3P17931 250 aaKnown RBP6.26□□□□□ -1.41
BRCA1-225ENST00000586385 PLNP26678 52 aa6.26□□□□□ -1.41
BRCA1-225ENST00000586385 Q1RN00 199 aa6.26□□□□□ -1.41
BRCA1-225ENST00000586385 COX6B2Q6YFQ2 88 aa6.26□□□□□ -1.41
BRCA1-225ENST00000586385 LAMTOR3Q9UHA4 124 aa6.26□□□□□ -1.41
BRCA1-225ENST00000586385 SLC25A34Q6PIV7 304 aa6.25□□□□□ -1.41
BRCA1-225ENST00000586385 SMIM29Q86T20 159 aa6.25□□□□□ -1.41
BRCA1-225ENST00000586385 HIST3H2BBQ8N257 126 aa6.25□□□□□ -1.41
BRCA1-225ENST00000586385 DHRS4-AS1Q9P1J3 65 aa6.25□□□□□ -1.41
BRCA1-225ENST00000586385 DPM2O94777 84 aa6.24□□□□□ -1.41
BRCA1-225ENST00000586385 FABP4P15090 132 aa6.23□□□□□ -1.41
BRCA1-225ENST00000586385 HINT1P49773 126 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-225ENST00000586385 ELOF1P60002 83 aaKnown RBP6.23□□□□□ -1.41
BRCA1-225ENST00000586385 HERVK_113P61574 105 aa6.23□□□□□ -1.41
BRCA1-225ENST00000586385 LINC00308Q8TCZ7 52 aa6.23□□□□□ -1.41
BRCA1-225ENST00000586385 PRO1933Q9H354 126 aa6.23□□□□□ -1.41
BRCA1-225ENST00000586385 IGKCP01834 107 aa6.22□□□□□ -1.41
BRCA1-225ENST00000586385 SMIM6P0DI80 62 aa6.22□□□□□ -1.41
BRCA1-225ENST00000586385 PET117Q6UWS5 81 aa6.22□□□□□ -1.41
BRCA1-225ENST00000586385 HIST1H2BLQ99880 126 aa6.22□□□□□ -1.41
BRCA1-225ENST00000586385 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
BRCA1-225ENST00000586385 HSBP1L1C9JCN9 74 aa6.21□□□□□ -1.42
BRCA1-225ENST00000586385 C6orf99Q4VX62 202 aa6.21□□□□□ -1.42
BRCA1-225ENST00000586385 DEFB105AQ8NG35 78 aa6.21□□□□□ -1.42
BRCA1-225ENST00000586385 OR13C6PQ8NH95 151 aa6.21□□□□□ -1.42
BRCA1-225ENST00000586385 E9PLD3 99 aa6.2□□□□□ -1.42
BRCA1-225ENST00000586385 COX7BP24311 80 aa6.2□□□□□ -1.42
BRCA1-225ENST00000586385 CBY1Q9Y3M2 126 aa6.2□□□□□ -1.42
BRCA1-225ENST00000586385 SSPOA2VEC9 5147 aa6.2□□□□□ -1.42
BRCA1-225ENST00000586385 USH2AO75445 5202 aa6.2□□□□□ -1.42
BRCA1-225ENST00000586385 TEX49A0A1B0GTD5 131 aa6.19□□□□□ -1.42
BRCA1-225ENST00000586385 TAL2Q16559 108 aa6.19□□□□□ -1.42
BRCA1-225ENST00000586385 SPANXDQ9BXN6 97 aa6.19□□□□□ -1.42
BRCA1-225ENST00000586385 KRTAP9-8Q9BYQ0 159 aa6.19□□□□□ -1.42
BRCA1-225ENST00000586385 IGLV5-48A0A075B6I7 105 aa6.18□□□□□ -1.42
BRCA1-225ENST00000586385 SCGB1D1O95968 90 aa6.18□□□□□ -1.42
BRCA1-225ENST00000586385 KRTDAPP60985 99 aa6.18□□□□□ -1.42
BRCA1-225ENST00000586385 SYS1-DBNDD2H3BUS1 97 aa6.17□□□□□ -1.42
BRCA1-225ENST00000586385 TIMM17BO60830 172 aa6.17□□□□□ -1.42
BRCA1-225ENST00000586385 LOC105371267A0A1B0GV96 52 aa6.16□□□□□ -1.42
BRCA1-225ENST00000586385 TTTY13Q9BZ97 58 aa6.16□□□□□ -1.42
BRCA1-225ENST00000586385 TRBV7-6A0A0J9YX20 115 aa6.14□□□□□ -1.43
BRCA1-225ENST00000586385 C3orf79P0CE67 100 aa6.14□□□□□ -1.43
BRCA1-225ENST00000586385 LINC01545Q5VT33 79 aa6.14□□□□□ -1.43
BRCA1-225ENST00000586385 Q6Q795 121 aa6.13□□□□□ -1.43
BRCA1-225ENST00000586385 VAMP8Q9BV40 100 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms