RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 H7BZZ5 65 aa9.01□□□□□ -0.97
SRSF1-205ENST00000582730 ZNF73O43830 326 aaPredicted RBP9.01□□□□□ -0.97
SRSF1-205ENST00000582730 VPREB1P12018 145 aa9.01□□□□□ -0.97
SRSF1-205ENST00000582730 RBM3P98179 157 aaKnown RBP9.01□□□□□ -0.97
SRSF1-205ENST00000582730 TRAV7A0A075B6U4 112 aa8.99□□□□□ -0.97
SRSF1-205ENST00000582730 COX7BP24311 80 aa8.99□□□□□ -0.97
SRSF1-205ENST00000582730 LINC01547P58512 204 aaPredicted RBP8.99□□□□□ -0.97
SRSF1-205ENST00000582730 HAMPP81172 84 aa8.99□□□□□ -0.97
SRSF1-205ENST00000582730 CASC10Q5T4H9 136 aa8.99□□□□□ -0.97
SRSF1-205ENST00000582730 M0R378 163 aa8.98□□□□□ -0.97
SRSF1-205ENST00000582730 Q6ZVQ6 151 aa8.97□□□□□ -0.97
SRSF1-205ENST00000582730 SNURFQ9Y675 71 aa8.97□□□□□ -0.97
SRSF1-205ENST00000582730 LOC110117498A0A087WWA1 95 aa8.96□□□□□ -0.97
SRSF1-205ENST00000582730 EPM2AB3EWF7 344 aa8.96□□□□□ -0.97
SRSF1-205ENST00000582730 NKAPP1Q8N9T2 125 aa8.96□□□□□ -0.97
SRSF1-205ENST00000582730 SERP1Q9Y6X1 66 aa8.96□□□□□ -0.97
SRSF1-205ENST00000582730 DNAH3Q8TD57 4116 aa8.96□□□□□ -0.98
SRSF1-205ENST00000582730 BCE1O60756 84 aa8.96□□□□□ -0.98
SRSF1-205ENST00000582730 KLKP1Q107X0 134 aa8.95□□□□□ -0.98
SRSF1-205ENST00000582730 RMI2Q96E14 147 aa8.95□□□□□ -0.98
SRSF1-205ENST00000582730 ELOF1P60002 83 aaKnown RBP8.94□□□□□ -0.98
SRSF1-205ENST00000582730 SERTAD4-AS1Q5TG53 156 aa8.93□□□□□ -0.98
SRSF1-205ENST00000582730 STAB2Q8WWQ8 2551 aa8.93□□□□□ -0.98
SRSF1-205ENST00000582730 F8WDY8 70 aa8.91□□□□□ -0.98
SRSF1-205ENST00000582730 F8WEM9 126 aa8.91□□□□□ -0.98
SRSF1-205ENST00000582730 LINC00336Q6ZUF6 198 aa8.9□□□□□ -0.98
SRSF1-205ENST00000582730 FAM168BA1KXE4 195 aa8.9□□□□□ -0.98
SRSF1-205ENST00000582730 RPL37AP8A6NKH3 93 aa8.9□□□□□ -0.98
SRSF1-205ENST00000582730 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.9□□□□□ -0.98
SRSF1-205ENST00000582730 SCXQ7RTU7 201 aa8.9□□□□□ -0.98
SRSF1-205ENST00000582730 HUWE1Q7Z6Z7 4374 aaKnown RBP8.9□□□□□ -0.99
SRSF1-205ENST00000582730 CXCL6P80162 114 aa8.89□□□□□ -0.99
SRSF1-205ENST00000582730 UBE2DNLQ8IWF7 75 aa8.89□□□□□ -0.99
SRSF1-205ENST00000582730 C7orf33Q8WU49 177 aa8.89□□□□□ -0.99
SRSF1-205ENST00000582730 MDFIQ99750 246 aa8.89□□□□□ -0.99
SRSF1-205ENST00000582730 PKIGQ9Y2B9 76 aa8.89□□□□□ -0.99
SRSF1-205ENST00000582730 PDE6GP18545 87 aa8.88□□□□□ -0.99
SRSF1-205ENST00000582730 FP248Q71RG6 208 aaPredicted RBP8.88□□□□□ -0.99
SRSF1-205ENST00000582730 LINC00528Q8N1L1 170 aa8.87□□□□□ -0.99
SRSF1-205ENST00000582730 TRBV7-6A0A0J9YX20 115 aa8.87□□□□□ -0.99
SRSF1-205ENST00000582730 DEFB105AQ8NG35 78 aa8.87□□□□□ -0.99
SRSF1-205ENST00000582730 SMIM26A0A096LP01 95 aa8.86□□□□□ -0.99
SRSF1-205ENST00000582730 PSCAO43653 123 aa8.86□□□□□ -0.99
SRSF1-205ENST00000582730 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
SRSF1-205ENST00000582730 TRBV7-4A0A0J9YYF1 115 aa8.85□□□□□ -0.99
SRSF1-205ENST00000582730 H3BQ85 93 aa8.85□□□□□ -0.99
SRSF1-205ENST00000582730 TLX1NBP0CAT3 122 aa8.84□□□□□ -0.99
SRSF1-205ENST00000582730 KRTAP1-5Q9BYS1 174 aa8.84□□□□□ -0.99
SRSF1-205ENST00000582730 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
SRSF1-205ENST00000582730 KCNQ1DNQ9H478 68 aa8.83□□□□□ -1
SRSF1-205ENST00000582730 LINC00474Q9P2X8 69 aa8.83□□□□□ -1
SRSF1-205ENST00000582730 IGKV2-24A0A0C4DH68 120 aa8.82□□□□□ -1
SRSF1-205ENST00000582730 NDUFC1O43677 76 aa8.82□□□□□ -1
SRSF1-205ENST00000582730 NREPQ16612 68 aa8.82□□□□□ -1
SRSF1-205ENST00000582730 ETDCA0A1B0GVM5 59 aa8.81□□□□□ -1
SRSF1-205ENST00000582730 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.81□□□□□ -1
SRSF1-205ENST00000582730 BPY2O14599 106 aa8.8□□□□□ -1
SRSF1-205ENST00000582730 Q8N9L7 120 aa8.79□□□□□ -1
SRSF1-205ENST00000582730 TMEM254Q8TBM7 123 aa8.79□□□□□ -1
SRSF1-205ENST00000582730 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
SRSF1-205ENST00000582730 IGLV1-50A0A075B6I6 118 aa8.78□□□□□ -1
SRSF1-205ENST00000582730 KRTAP7-1Q8IUC3 87 aa8.78□□□□□ -1
SRSF1-205ENST00000582730 PLA2G2DQ9UNK4 145 aa8.78□□□□□ -1
SRSF1-205ENST00000582730 APLNQ9ULZ1 77 aa8.78□□□□□ -1
SRSF1-205ENST00000582730 TENM2Q9NT68 2774 aa8.77□□□□□ -1.01
SRSF1-205ENST00000582730 B9D2Q9BPU9 175 aa8.77□□□□□ -1.01
SRSF1-205ENST00000582730 A0A0U1RQV1 116 aa8.77□□□□□ -1.01
SRSF1-205ENST00000582730 PRYO14603 147 aa8.77□□□□□ -1.01
SRSF1-205ENST00000582730 ATP5EP56381 51 aaPredicted RBP8.77□□□□□ -1.01
SRSF1-205ENST00000582730 Q6ZRX8 168 aa8.77□□□□□ -1.01
SRSF1-205ENST00000582730 LYSTQ99698 3801 aa8.77□□□□□ -1.01
SRSF1-205ENST00000582730 UBE2BP63146 152 aa8.76□□□□□ -1.01
SRSF1-205ENST00000582730 A0A096LNI7 61 aa8.75□□□□□ -1.01
SRSF1-205ENST00000582730 Q9BRP9 147 aa8.75□□□□□ -1.01
SRSF1-205ENST00000582730 ST20-AS1Q8NBB2 130 aa8.75□□□□□ -1.01
SRSF1-205ENST00000582730 DHRS4-AS1Q9P1J3 65 aa8.75□□□□□ -1.01
SRSF1-205ENST00000582730 IGLV5-37A0A075B6J1 123 aa8.74□□□□□ -1.01
SRSF1-205ENST00000582730 Q8N377 158 aa8.74□□□□□ -1.01
SRSF1-205ENST00000582730 FAM229BQ4G0N7 80 aa8.74□□□□□ -1.01
SRSF1-205ENST00000582730 IGKV4-1P06312 121 aa8.73□□□□□ -1.01
SRSF1-205ENST00000582730 ERC2-IT1O76042 136 aa8.73□□□□□ -1.01
SRSF1-205ENST00000582730 C3orf84H3BNL1 204 aa8.72□□□□□ -1.01
SRSF1-205ENST00000582730 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
SRSF1-205ENST00000582730 DNAH1Q9P2D7 4330 aa8.72□□□□□ -1.01
SRSF1-205ENST00000582730 KRTAP4-16G5E9R7 235 aaPredicted RBP8.71□□□□□ -1.01
SRSF1-205ENST00000582730 REG3GQ6UW15 175 aa8.71□□□□□ -1.01
SRSF1-205ENST00000582730 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.01
SRSF1-205ENST00000582730 BRK1Q8WUW1 75 aa8.71□□□□□ -1.01
SRSF1-205ENST00000582730 DNAH10Q8IVF4 4471 aa8.71□□□□□ -1.02
SRSF1-205ENST00000582730 SPRR1AP35321 89 aa8.71□□□□□ -1.02
SRSF1-205ENST00000582730 DNAH9Q9NYC9 4486 aa8.7□□□□□ -1.02
SRSF1-205ENST00000582730 CHTF8P0CG12 524 aa8.7□□□□□ -1.02
SRSF1-205ENST00000582730 A0A1W2PNN7 141 aa8.69□□□□□ -1.02
SRSF1-205ENST00000582730 C16orf90A8MZG2 172 aa8.69□□□□□ -1.02
SRSF1-205ENST00000582730 CNBPP62633 177 aaKnown RBP8.68□□□□□ -1.02
SRSF1-205ENST00000582730 PRLHP81277 87 aa8.68□□□□□ -1.02
SRSF1-205ENST00000582730 NUPR2A6NF83 97 aa8.68□□□□□ -1.02
SRSF1-205ENST00000582730 FUSP35637 526 aaKnown RBP eCLIP8.67□□□□□ -1.022e-8■■□□□ 12.8
SRSF1-205ENST00000582730 C14orf177Q52M58 125 aa8.67□□□□□ -1.02
SRSF1-205ENST00000582730 HIGD2AQ9BW72 106 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms