RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CFC1BP0CG36 223 aa8.84□□□□□ -0.99
SKA2-205ENST00000580541 CFC1P0CG37 223 aa8.84□□□□□ -0.99
SKA2-205ENST00000580541 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
SKA2-205ENST00000580541 FXYD2P54710 66 aa8.83□□□□□ -1
SKA2-205ENST00000580541 BVES-AS1Q5T3Y7 98 aa8.83□□□□□ -1
SKA2-205ENST00000580541 Q5VSD8 79 aa8.83□□□□□ -1
SKA2-205ENST00000580541 PRO1854Q9UHT4 67 aa8.83□□□□□ -1
SKA2-205ENST00000580541 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
SKA2-205ENST00000580541 BIRC6Q9NR09 4857 aa8.82□□□□□ -1
SKA2-205ENST00000580541 ZNF73O43830 326 aaPredicted RBP8.82□□□□□ -1
SKA2-205ENST00000580541 RPL28P46779 137 aaKnown RBP8.82□□□□□ -1
SKA2-205ENST00000580541 UBE2AP49459 152 aa8.82□□□□□ -1
SKA2-205ENST00000580541 VAMP3Q15836 100 aa8.82□□□□□ -1
SKA2-205ENST00000580541 NHP2Q9NX24 153 aaKnown RBP8.82□□□□□ -1
SKA2-205ENST00000580541 IGLV7-43P04211 117 aa8.81□□□□□ -1
SKA2-205ENST00000580541 SPRR1AP35321 89 aa8.81□□□□□ -1
SKA2-205ENST00000580541 RPL13AP40429 203 aaKnown RBP8.81□□□□□ -1
SKA2-205ENST00000580541 FAM19A1Q7Z5A9 133 aa8.81□□□□□ -1
SKA2-205ENST00000580541 KRTAP11-1Q8IUC1 163 aa8.81□□□□□ -1
SKA2-205ENST00000580541 DIRC1Q969H9 104 aa8.81□□□□□ -1
SKA2-205ENST00000580541 TRBV7-6A0A0J9YX20 115 aa8.8□□□□□ -1
SKA2-205ENST00000580541 H0Y9J4 135 aa8.8□□□□□ -1
SKA2-205ENST00000580541 ZNF861PO60384 105 aa8.79□□□□□ -1
SKA2-205ENST00000580541 A0A1B0GWB2 263 aa8.78□□□□□ -1
SKA2-205ENST00000580541 Q1RN00 199 aa8.78□□□□□ -1
SKA2-205ENST00000580541 SMIM11BQ8TCY0 68 aa8.78□□□□□ -1
SKA2-205ENST00000580541 H7C2G1 150 aa8.77□□□□□ -1.01
SKA2-205ENST00000580541 C6orf99Q4VX62 202 aa8.77□□□□□ -1.01
SKA2-205ENST00000580541 SPINK6Q6UWN8 80 aa8.77□□□□□ -1.01
SKA2-205ENST00000580541 SNCGO76070 127 aa8.76□□□□□ -1.01
SKA2-205ENST00000580541 COX7BP24311 80 aa8.76□□□□□ -1.01
SKA2-205ENST00000580541 XP32Q5T750 250 aa8.76□□□□□ -1.01
SKA2-205ENST00000580541 HSPG2P98160 4391 aa8.76□□□□□ -1.01
SKA2-205ENST00000580541 B5MCH6 92 aa8.75□□□□□ -1.01
SKA2-205ENST00000580541 KRTAP4-16G5E9R7 235 aaPredicted RBP8.75□□□□□ -1.01
SKA2-205ENST00000580541 COX6CP09669 75 aa8.75□□□□□ -1.01
SKA2-205ENST00000580541 INAFM2P0DMQ5 153 aa8.75□□□□□ -1.01
SKA2-205ENST00000580541 Q6ZRX8 168 aa8.75□□□□□ -1.01
SKA2-205ENST00000580541 BATFQ16520 125 aa8.74□□□□□ -1.01
SKA2-205ENST00000580541 DHRS4-AS1Q9P1J3 65 aa8.74□□□□□ -1.01
SKA2-205ENST00000580541 RYR1P21817 5038 aa8.74□□□□□ -1.01
SKA2-205ENST00000580541 H0YGX0 51 aa8.73□□□□□ -1.01
SKA2-205ENST00000580541 SLC25A20O43772 301 aa8.73□□□□□ -1.01
SKA2-205ENST00000580541 ELOF1P60002 83 aaKnown RBP8.73□□□□□ -1.01
SKA2-205ENST00000580541 PRLHP81277 87 aa8.73□□□□□ -1.01
SKA2-205ENST00000580541 KIAA1109Q2LD37 5005 aa8.73□□□□□ -1.01
SKA2-205ENST00000580541 VPS13BQ7Z7G8 4022 aa8.73□□□□□ -1.01
SKA2-205ENST00000580541 PCP4L1A6NKN8 68 aa8.72□□□□□ -1.01
SKA2-205ENST00000580541 PSMB2P49721 201 aa8.72□□□□□ -1.01
SKA2-205ENST00000580541 KRTAP10-4P60372 401 aaPredicted RBP8.72□□□□□ -1.01
SKA2-205ENST00000580541 KRTAP13-1Q8IUC0 172 aa8.72□□□□□ -1.01
SKA2-205ENST00000580541 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
SKA2-205ENST00000580541 KRTAP4-8Q9BYQ9 185 aa8.72□□□□□ -1.01
SKA2-205ENST00000580541 K7ERJ3 54 aa8.71□□□□□ -1.02
SKA2-205ENST00000580541 ZNF706Q9Y5V0 76 aaPredicted RBP8.7□□□□□ -1.02
SKA2-205ENST00000580541 SMCR5Q8TEV8 140 aa8.69□□□□□ -1.02
SKA2-205ENST00000580541 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
SKA2-205ENST00000580541 TSPAN13O95857 204 aa8.67□□□□□ -1.02
SKA2-205ENST00000580541 FAT1Q14517 4588 aa8.67□□□□□ -1.02
SKA2-205ENST00000580541 LINC00575Q6W349 94 aa8.66□□□□□ -1.02
SKA2-205ENST00000580541 Q9BRP9 147 aa8.66□□□□□ -1.02
SKA2-205ENST00000580541 A0A1B0GX51 115 aa8.65□□□□□ -1.02
SKA2-205ENST00000580541 hADV29S1A0JD25 119 aa8.65□□□□□ -1.02
SKA2-205ENST00000580541 TRIAP1O43715 76 aa8.65□□□□□ -1.02
SKA2-205ENST00000580541 GHRHP01286 108 aa8.65□□□□□ -1.02
SKA2-205ENST00000580541 COL5A1-AS1Q5SY13 56 aa8.65□□□□□ -1.02
SKA2-205ENST00000580541 LYRM7Q5U5X0 104 aa8.65□□□□□ -1.02
SKA2-205ENST00000580541 SNHG12Q9BXW3 62 aa8.64□□□□□ -1.03
SKA2-205ENST00000580541 KRTAP17-1Q9BYP8 105 aa8.64□□□□□ -1.03
SKA2-205ENST00000580541 SRRM2Q9UQ35 2752 aaKnown RBP8.63□□□□□ -1.03
SKA2-205ENST00000580541 C9orf118A6NHY6 69 aa8.61□□□□□ -1.03
SKA2-205ENST00000580541 OCIAD2Q56VL3 154 aa8.61□□□□□ -1.03
SKA2-205ENST00000580541 ERC2-IT1O76042 136 aa8.6□□□□□ -1.03
SKA2-205ENST00000580541 DNAL4O96015 105 aa8.6□□□□□ -1.03
SKA2-205ENST00000580541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.6□□□□□ -1.03
SKA2-205ENST00000580541 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
SKA2-205ENST00000580541 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
SKA2-205ENST00000580541 H3BQ85 93 aa8.59□□□□□ -1.03
SKA2-205ENST00000580541 FAM229BQ4G0N7 80 aa8.59□□□□□ -1.03
SKA2-205ENST00000580541 GAGE2AQ6NT46 116 aa8.59□□□□□ -1.03
SKA2-205ENST00000580541 TEX49A0A1B0GTD5 131 aa8.58□□□□□ -1.04
SKA2-205ENST00000580541 H3BUT2 72 aa8.58□□□□□ -1.04
SKA2-205ENST00000580541 TAX1BP3O14907 124 aa8.58□□□□□ -1.04
SKA2-205ENST00000580541 OXTP01178 125 aa8.58□□□□□ -1.04
SKA2-205ENST00000580541 TRBV20-1A0A075B6N2 111 aa8.57□□□□□ -1.04
SKA2-205ENST00000580541 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.57□□□□□ -1.04
SKA2-205ENST00000580541 CRYGAP11844 174 aa8.57□□□□□ -1.04
SKA2-205ENST00000580541 DEFB105AQ8NG35 78 aa8.57□□□□□ -1.04
SKA2-205ENST00000580541 PPDPFLQ8WWR9 84 aa8.57□□□□□ -1.04
SKA2-205ENST00000580541 ATXN8Q156A1 80 aa8.56□□□□□ -1.04
SKA2-205ENST00000580541 Q6ZQY7 126 aa8.56□□□□□ -1.04
SKA2-205ENST00000580541 CLEC2BQ92478 149 aa8.56□□□□□ -1.04
SKA2-205ENST00000580541 HERC2O95714 4834 aa8.55□□□□□ -1.04
SKA2-205ENST00000580541 TRACP01848 142 aa8.55□□□□□ -1.04
SKA2-205ENST00000580541 FABP2P12104 132 aa8.55□□□□□ -1.04
SKA2-205ENST00000580541 LINC00483Q53H64 154 aa8.55□□□□□ -1.04
SKA2-205ENST00000580541 ST20-AS1Q8NBB2 130 aa8.55□□□□□ -1.04
SKA2-205ENST00000580541 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
SKA2-205ENST00000580541 KRTAP9-2Q9BYQ4 174 aa8.55□□□□□ -1.04
SKA2-205ENST00000580541 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms