RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 LIMD2Q9BT23 127 aa9.89□□□□□ -0.83
MKS1-209ENST00000580127 ZNF73O43830 326 aaPredicted RBP9.87□□□□□ -0.83
MKS1-209ENST00000580127 LEPROTL1O95214 131 aa9.87□□□□□ -0.83
MKS1-209ENST00000580127 CRCT1Q9UGL9 99 aa9.87□□□□□ -0.83
MKS1-209ENST00000580127 DPM2O94777 84 aa9.85□□□□□ -0.83
MKS1-209ENST00000580127 TSPEAR-AS2P59090 65 aa9.84□□□□□ -0.83
MKS1-209ENST00000580127 HSPB8Q9UJY1 196 aa9.84□□□□□ -0.83
MKS1-209ENST00000580127 CFC1BP0CG36 223 aa9.83□□□□□ -0.84
MKS1-209ENST00000580127 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
MKS1-209ENST00000580127 ST20-AS1Q8NBB2 130 aa9.81□□□□□ -0.84
MKS1-209ENST00000580127 DHRS4-AS1Q9P1J3 65 aa9.81□□□□□ -0.84
MKS1-209ENST00000580127 IGLV8-61A0A075B6I0 122 aa9.8□□□□□ -0.84
MKS1-209ENST00000580127 IGKCP01834 107 aa9.8□□□□□ -0.84
MKS1-209ENST00000580127 PCOTHQ58A44 107 aa9.8□□□□□ -0.84
MKS1-209ENST00000580127 OR13C6PQ8NH95 151 aa9.79□□□□□ -0.84
MKS1-209ENST00000580127 SPRR1BP22528 89 aa9.78□□□□□ -0.84
MKS1-209ENST00000580127 NPC2P61916 151 aa9.78□□□□□ -0.84
MKS1-209ENST00000580127 HRCT1Q6UXD1 115 aa9.78□□□□□ -0.84
MKS1-209ENST00000580127 TMA7Q9Y2S6 64 aaKnown RBP9.78□□□□□ -0.84
MKS1-209ENST00000580127 FABP4P15090 132 aa9.77□□□□□ -0.85
MKS1-209ENST00000580127 LCE2CQ5TA81 110 aa9.77□□□□□ -0.85
MKS1-209ENST00000580127 YPEL4Q96NS1 127 aa9.77□□□□□ -0.85
MKS1-209ENST00000580127 A0A0J9YXY3 114 aa9.76□□□□□ -0.85
MKS1-209ENST00000580127 FSIP2Q5CZC0 6907 aa9.76□□□□□ -0.85
MKS1-209ENST00000580127 C9orf92A6NGG3 77 aa9.75□□□□□ -0.85
MKS1-209ENST00000580127 SERF1AO75920 110 aa9.75□□□□□ -0.85
MKS1-209ENST00000580127 CD164Q04900 197 aa9.75□□□□□ -0.85
MKS1-209ENST00000580127 ADAMTSL4-AS1Q5T5F5 129 aa9.75□□□□□ -0.85
MKS1-209ENST00000580127 TAL2Q16559 108 aa9.74□□□□□ -0.85
MKS1-209ENST00000580127 SOSTDC1Q6X4U4 206 aa9.74□□□□□ -0.85
MKS1-209ENST00000580127 SPANXCQ9NY87 97 aa9.74□□□□□ -0.85
MKS1-209ENST00000580127 TRGC2P03986 189 aa9.73□□□□□ -0.85
MKS1-209ENST00000580127 PMCHL2Q9BQD1 86 aa9.73□□□□□ -0.85
MKS1-209ENST00000580127 PRO1933Q9H354 126 aa9.73□□□□□ -0.85
MKS1-209ENST00000580127 MT1HP80294 61 aa9.72□□□□□ -0.85
MKS1-209ENST00000580127 LINC00518Q8N0U6 118 aa9.72□□□□□ -0.85
MKS1-209ENST00000580127 E9PLD3 99 aa9.71□□□□□ -0.86
MKS1-209ENST00000580127 H7C2G1 150 aa9.71□□□□□ -0.86
MKS1-209ENST00000580127 SPANXDQ9BXN6 97 aa9.71□□□□□ -0.86
MKS1-209ENST00000580127 EIF4EBP3O60516 100 aaPredicted RBP9.7□□□□□ -0.86
MKS1-209ENST00000580127 COX7BP24311 80 aa9.7□□□□□ -0.86
MKS1-209ENST00000580127 LINC00308Q8TCZ7 52 aa9.7□□□□□ -0.86
MKS1-209ENST00000580127 AKR1D1P51857 326 aa9.69□□□□□ -0.86
MKS1-209ENST00000580127 DEFB105AQ8NG35 78 aa9.69□□□□□ -0.86
MKS1-209ENST00000580127 TEX49A0A1B0GTD5 131 aa9.68□□□□□ -0.86
MKS1-209ENST00000580127 M0R2T5 61 aa9.68□□□□□ -0.86
MKS1-209ENST00000580127 TIMM17BO60830 172 aa9.68□□□□□ -0.86
MKS1-209ENST00000580127 KRTAP19-2Q3LHN2 52 aa9.68□□□□□ -0.86
MKS1-209ENST00000580127 ELOF1P60002 83 aaKnown RBP9.66□□□□□ -0.86
MKS1-209ENST00000580127 Q1RN00 199 aa9.66□□□□□ -0.86
MKS1-209ENST00000580127 Q5XG85 94 aa9.66□□□□□ -0.86
MKS1-209ENST00000580127 LINC00310P59036 64 aa9.65□□□□□ -0.86
MKS1-209ENST00000580127 COX6B2Q6YFQ2 88 aa9.65□□□□□ -0.86
MKS1-209ENST00000580127 TRBV7-6A0A0J9YX20 115 aa9.64□□□□□ -0.87
MKS1-209ENST00000580127 C6orf99Q4VX62 202 aa9.64□□□□□ -0.87
MKS1-209ENST00000580127 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
MKS1-209ENST00000580127 LITAFQ99732 161 aa9.61□□□□□ -0.87
MKS1-209ENST00000580127 ZNF815PA8K554 130 aa9.6□□□□□ -0.87
MKS1-209ENST00000580127 TCL1BO95988 128 aa9.6□□□□□ -0.87
MKS1-209ENST00000580127 KRTAP10-6P60371 365 aaPredicted RBP9.6□□□□□ -0.87
MKS1-209ENST00000580127 C1orf195Q5TG92 126 aa9.6□□□□□ -0.87
MKS1-209ENST00000580127 SYS1-DBNDD2H3BUS1 97 aa9.59□□□□□ -0.87
MKS1-209ENST00000580127 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
MKS1-209ENST00000580127 A0A1B0GWB2 263 aa9.58□□□□□ -0.88
MKS1-209ENST00000580127 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
MKS1-209ENST00000580127 A4D1N5 150 aa9.57□□□□□ -0.88
MKS1-209ENST00000580127 NHP2Q9NX24 153 aaKnown RBP9.56□□□□□ -0.88
MKS1-209ENST00000580127 PET117Q6UWS5 81 aa9.55□□□□□ -0.88
MKS1-209ENST00000580127 SMIM29Q86T20 159 aa9.55□□□□□ -0.88
MKS1-209ENST00000580127 A6NDN8 102 aa9.54□□□□□ -0.88
MKS1-209ENST00000580127 SCGB1D4Q6XE38 83 aa9.54□□□□□ -0.88
MKS1-209ENST00000580127 IGLV5-48A0A075B6I7 105 aa9.53□□□□□ -0.88
MKS1-209ENST00000580127 LINC01545Q5VT33 79 aa9.53□□□□□ -0.88
MKS1-209ENST00000580127 IFITM1P13164 125 aa9.52□□□□□ -0.89
MKS1-209ENST00000580127 COLCA2A8K830 154 aa9.51□□□□□ -0.89
MKS1-209ENST00000580127 F8WEM9 126 aa9.51□□□□□ -0.89
MKS1-209ENST00000580127 Q6ZVH6 145 aa9.5□□□□□ -0.89
MKS1-209ENST00000580127 VAMP3Q15836 100 aa9.48□□□□□ -0.89
MKS1-209ENST00000580127 TTTY13Q9BZ97 58 aa9.47□□□□□ -0.89
MKS1-209ENST00000580127 TRAV13-2A0A0B4J235 113 aa9.46□□□□□ -0.9
MKS1-209ENST00000580127 A0A0G2JQZ4 141 aa9.46□□□□□ -0.9
MKS1-209ENST00000580127 ATP11AUNQ6ZP68 121 aa9.46□□□□□ -0.9
MKS1-209ENST00000580127 PCP2Q8IVA1 136 aa9.44□□□□□ -0.9
MKS1-209ENST00000580127 C20orf202A1L168 122 aa9.43□□□□□ -0.9
MKS1-209ENST00000580127 Q6JHZ5 121 aa9.43□□□□□ -0.9
MKS1-209ENST00000580127 Q6Q795 121 aa9.43□□□□□ -0.9
MKS1-209ENST00000580127 HIST1H2BKO60814 126 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 HIST1H2BJP06899 126 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 HIST1H2BOP23527 126 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 HIST1H2BBP33778 126 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 HIST1H2BDP58876 126 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 HIST1H2BCP62807 126 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 HIST2H2BEQ16778 126 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.42□□□□□ -0.9
MKS1-209ENST00000580127 MUSTN1Q8IVN3 82 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 HIST1H2BHQ93079 126 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 HIST1H2BNQ99877 126 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 HIST1H2BMQ99879 126 aa9.42□□□□□ -0.9
MKS1-209ENST00000580127 C3orf79P0CE67 100 aa9.4□□□□□ -0.9
MKS1-209ENST00000580127 KRTDAPP60985 99 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms