RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 TSPEAR-AS2P59090 65 aa7.1□□□□□ -1.27
CDK5RAP3-213ENST00000579605 S100A7L2Q5SY68 101 aa7.1□□□□□ -1.27
CDK5RAP3-213ENST00000579605 Q6ZRX8 168 aa7.1□□□□□ -1.27
CDK5RAP3-213ENST00000579605 ARL17AQ8IVW1 177 aa7.1□□□□□ -1.27
CDK5RAP3-213ENST00000579605 YPEL4Q96NS1 127 aa7.1□□□□□ -1.27
CDK5RAP3-213ENST00000579605 Q9BRP9 147 aa7.1□□□□□ -1.27
CDK5RAP3-213ENST00000579605 SPANXB1Q9NS25 103 aaPredicted RBP7.1□□□□□ -1.27
CDK5RAP3-213ENST00000579605 SYNE2Q8WXH0 6885 aaKnown RBP7.1□□□□□ -1.27
CDK5RAP3-213ENST00000579605 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.27
CDK5RAP3-213ENST00000579605 J3QQQ9 107 aa7.08□□□□□ -1.28
CDK5RAP3-213ENST00000579605 LEPROTL1O95214 131 aa7.08□□□□□ -1.28
CDK5RAP3-213ENST00000579605 PLNP26678 52 aa7.08□□□□□ -1.28
CDK5RAP3-213ENST00000579605 HERVK_113P61574 105 aa7.08□□□□□ -1.28
CDK5RAP3-213ENST00000579605 JOSD1Q15040 202 aaPredicted RBP7.08□□□□□ -1.28
CDK5RAP3-213ENST00000579605 C9orf153Q5TBE3 101 aa7.08□□□□□ -1.28
CDK5RAP3-213ENST00000579605 MACF1Q9UPN3 7388 aaKnown RBP7.07□□□□□ -1.28
CDK5RAP3-213ENST00000579605 NDUFC2O95298 119 aa7.07□□□□□ -1.28
CDK5RAP3-213ENST00000579605 LGALS3P17931 250 aaKnown RBP7.07□□□□□ -1.28
CDK5RAP3-213ENST00000579605 TRAV23DV6A0A075B6W5 121 aa7.06□□□□□ -1.28
CDK5RAP3-213ENST00000579605 IGLV6-57P01721 117 aa7.06□□□□□ -1.28
CDK5RAP3-213ENST00000579605 NMUP48645 174 aa7.06□□□□□ -1.28
CDK5RAP3-213ENST00000579605 DPM2O94777 84 aa7.05□□□□□ -1.28
CDK5RAP3-213ENST00000579605 HSPB8Q9UJY1 196 aa7.05□□□□□ -1.28
CDK5RAP3-213ENST00000579605 SERF1AO75920 110 aa7.04□□□□□ -1.28
CDK5RAP3-213ENST00000579605 IGKCP01834 107 aa7.04□□□□□ -1.28
CDK5RAP3-213ENST00000579605 CFC1P0CG37 223 aa7.04□□□□□ -1.28
CDK5RAP3-213ENST00000579605 PMCHL2Q9BQD1 86 aa7.04□□□□□ -1.28
CDK5RAP3-213ENST00000579605 ZNF73O43830 326 aaPredicted RBP7.03□□□□□ -1.28
CDK5RAP3-213ENST00000579605 TRGC2P03986 189 aa7.03□□□□□ -1.28
CDK5RAP3-213ENST00000579605 FABP4P15090 132 aa7.03□□□□□ -1.28
CDK5RAP3-213ENST00000579605 HINT1P49773 126 aaPredicted RBP7.03□□□□□ -1.28
CDK5RAP3-213ENST00000579605 NPC2P61916 151 aa7.03□□□□□ -1.28
CDK5RAP3-213ENST00000579605 Q6Q795 121 aa7.03□□□□□ -1.28
CDK5RAP3-213ENST00000579605 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
CDK5RAP3-213ENST00000579605 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
CDK5RAP3-213ENST00000579605 CBY1Q9Y3M2 126 aa7.02□□□□□ -1.29
CDK5RAP3-213ENST00000579605 C5orf52A6NGY3 159 aa7.01□□□□□ -1.29
CDK5RAP3-213ENST00000579605 LINC00310P59036 64 aa7.01□□□□□ -1.29
CDK5RAP3-213ENST00000579605 A0A0J9YXY3 114 aa7□□□□□ -1.29
CDK5RAP3-213ENST00000579605 ADAMTSL4-AS1Q5T5F5 129 aa7□□□□□ -1.29
CDK5RAP3-213ENST00000579605 EIF4EBP3O60516 100 aaPredicted RBP6.99□□□□□ -1.29
CDK5RAP3-213ENST00000579605 SLC25A34Q6PIV7 304 aa6.99□□□□□ -1.29
CDK5RAP3-213ENST00000579605 LIMD2Q9BT23 127 aa6.99□□□□□ -1.29
CDK5RAP3-213ENST00000579605 KRTAP9-8Q9BYQ0 159 aa6.99□□□□□ -1.29
CDK5RAP3-213ENST00000579605 E9PLD3 99 aa6.98□□□□□ -1.29
CDK5RAP3-213ENST00000579605 HRCT1Q6UXD1 115 aa6.98□□□□□ -1.29
CDK5RAP3-213ENST00000579605 OR13C6PQ8NH95 151 aa6.98□□□□□ -1.29
CDK5RAP3-213ENST00000579605 LAMTOR3Q9UHA4 124 aa6.97□□□□□ -1.29
CDK5RAP3-213ENST00000579605 SPRR1BP22528 89 aa6.96□□□□□ -1.3
CDK5RAP3-213ENST00000579605 DHRS4-AS1Q9P1J3 65 aa6.96□□□□□ -1.3
CDK5RAP3-213ENST00000579605 LINC00308Q8TCZ7 52 aa6.95□□□□□ -1.3
CDK5RAP3-213ENST00000579605 SPANXCQ9NY87 97 aa6.95□□□□□ -1.3
CDK5RAP3-213ENST00000579605 TIMM17BO60830 172 aa6.93□□□□□ -1.3
CDK5RAP3-213ENST00000579605 SPANXDQ9BXN6 97 aa6.93□□□□□ -1.3
CDK5RAP3-213ENST00000579605 LCE2BO14633 110 aa6.92□□□□□ -1.3
CDK5RAP3-213ENST00000579605 COX7BP24311 80 aa6.92□□□□□ -1.3
CDK5RAP3-213ENST00000579605 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
CDK5RAP3-213ENST00000579605 TAL2Q16559 108 aa6.92□□□□□ -1.3
CDK5RAP3-213ENST00000579605 LITAFQ99732 161 aa6.92□□□□□ -1.3
CDK5RAP3-213ENST00000579605 DEFB105AQ8NG35 78 aa6.91□□□□□ -1.3
CDK5RAP3-213ENST00000579605 ZNF815PA8K554 130 aa6.9□□□□□ -1.3
CDK5RAP3-213ENST00000579605 SYS1-DBNDD2H3BUS1 97 aa6.9□□□□□ -1.3
CDK5RAP3-213ENST00000579605 ELOF1P60002 83 aaKnown RBP6.9□□□□□ -1.3
CDK5RAP3-213ENST00000579605 Q1RN00 199 aa6.9□□□□□ -1.3
CDK5RAP3-213ENST00000579605 C6orf99Q4VX62 202 aa6.9□□□□□ -1.3
CDK5RAP3-213ENST00000579605 LINC00518Q8N0U6 118 aa6.9□□□□□ -1.3
CDK5RAP3-213ENST00000579605 PRO1933Q9H354 126 aa6.9□□□□□ -1.3
CDK5RAP3-213ENST00000579605 COLCA2A8K830 154 aa6.89□□□□□ -1.31
CDK5RAP3-213ENST00000579605 CD164Q04900 197 aa6.89□□□□□ -1.31
CDK5RAP3-213ENST00000579605 TEX49A0A1B0GTD5 131 aa6.88□□□□□ -1.31
CDK5RAP3-213ENST00000579605 H7C2G1 150 aa6.88□□□□□ -1.31
CDK5RAP3-213ENST00000579605 LINC01545Q5VT33 79 aa6.86□□□□□ -1.31
CDK5RAP3-213ENST00000579605 AKR1D1P51857 326 aa6.85□□□□□ -1.31
CDK5RAP3-213ENST00000579605 KRTAP6-3Q3LI67 103 aa6.85□□□□□ -1.31
CDK5RAP3-213ENST00000579605 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
CDK5RAP3-213ENST00000579605 TTTY13Q9BZ97 58 aa6.85□□□□□ -1.31
CDK5RAP3-213ENST00000579605 TRBV7-6A0A0J9YX20 115 aa6.84□□□□□ -1.31
CDK5RAP3-213ENST00000579605 MT2AP02795 61 aa6.84□□□□□ -1.31
CDK5RAP3-213ENST00000579605 Q5XG85 94 aa6.84□□□□□ -1.31
CDK5RAP3-213ENST00000579605 LINC00846Q9NV44 126 aa6.84□□□□□ -1.31
CDK5RAP3-213ENST00000579605 A0A1B0GWB2 263 aa6.83□□□□□ -1.32
CDK5RAP3-213ENST00000579605 C1orf195Q5TG92 126 aa6.83□□□□□ -1.32
CDK5RAP3-213ENST00000579605 SMIM29Q86T20 159 aa6.83□□□□□ -1.32
CDK5RAP3-213ENST00000579605 COPS9Q8WXC6 57 aa6.83□□□□□ -1.32
CDK5RAP3-213ENST00000579605 A6NDN8 102 aa6.82□□□□□ -1.32
CDK5RAP3-213ENST00000579605 SCGB1D4Q6XE38 83 aa6.82□□□□□ -1.32
CDK5RAP3-213ENST00000579605 SLC7A5P1Q8MH63 180 aa6.82□□□□□ -1.32
CDK5RAP3-213ENST00000579605 IGLV5-48A0A075B6I7 105 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST1H2BKO60814 126 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST1H2BJP06899 126 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST1H2BOP23527 126 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST1H2BBP33778 126 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST1H2BDP58876 126 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST1H2BCP62807 126 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST2H2BEQ16778 126 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST1H2BHQ93079 126 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST1H2BNQ99877 126 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 HIST1H2BMQ99879 126 aa6.81□□□□□ -1.32
CDK5RAP3-213ENST00000579605 A0A0G2JQZ4 141 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms