RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	IGLV6-57	P01721	117 aa		5.19	□□□□□ -1.58
MSI2-208	ENST00000579466	LOC107984156	A0A0G2JMH3	177 aa		5.18	□□□□□ -1.58
MSI2-208	ENST00000579466	HSBP1	O75506	76 aa		5.18	□□□□□ -1.58
MSI2-208	ENST00000579466	ARL17A	Q8IVW1	177 aa		5.18	□□□□□ -1.58
MSI2-208	ENST00000579466	CHCHD1	Q96BP2	118 aa	Known RBP	5.18	□□□□□ -1.58
MSI2-208	ENST00000579466	PMCHL2	Q9BQD1	86 aa		5.18	□□□□□ -1.58
MSI2-208	ENST00000579466		J3QQQ9	107 aa		5.17	□□□□□ -1.58
MSI2-208	ENST00000579466	EIF4EBP3	O60516	100 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-208	ENST00000579466	LGALS3	P17931	250 aa	Known RBP	5.17	□□□□□ -1.58
MSI2-208	ENST00000579466	SOSTDC1	Q6X4U4	206 aa		5.17	□□□□□ -1.58
MSI2-208	ENST00000579466	NDUFC2	O95298	119 aa		5.16	□□□□□ -1.58
MSI2-208	ENST00000579466	HINT1	P49773	126 aa	Predicted RBP	5.16	□□□□□ -1.58
MSI2-208	ENST00000579466		Q1RN00	199 aa		5.16	□□□□□ -1.58
MSI2-208	ENST00000579466	C10orf91	Q5T1B1	145 aa		5.16	□□□□□ -1.58
MSI2-208	ENST00000579466	OR13C6P	Q8NH95	151 aa		5.16	□□□□□ -1.58
MSI2-208	ENST00000579466	FLG	P20930	4061 aa	Predicted RBP	5.15	□□□□□ -1.58
MSI2-208	ENST00000579466	APOC3	P02656	99 aa		5.15	□□□□□ -1.59
MSI2-208	ENST00000579466	HERVK_113	P61574	105 aa		5.15	□□□□□ -1.59
MSI2-208	ENST00000579466	DEFB105A	Q8NG35	78 aa		5.15	□□□□□ -1.59
MSI2-208	ENST00000579466	LAMTOR3	Q9UHA4	124 aa		5.15	□□□□□ -1.59
MSI2-208	ENST00000579466	ADAMTSL4-AS1	Q5T5F5	129 aa		5.14	□□□□□ -1.59
MSI2-208	ENST00000579466	SLC25A34	Q6PIV7	304 aa		5.14	□□□□□ -1.59
MSI2-208	ENST00000579466		A0A0G2JQZ4	141 aa		5.13	□□□□□ -1.59
MSI2-208	ENST00000579466	LEPROTL1	O95214	131 aa		5.13	□□□□□ -1.59
MSI2-208	ENST00000579466	SPRR1B	P22528	89 aa		5.13	□□□□□ -1.59
MSI2-208	ENST00000579466	PLN	P26678	52 aa		5.13	□□□□□ -1.59
MSI2-208	ENST00000579466	NMU	P48645	174 aa		5.13	□□□□□ -1.59
MSI2-208	ENST00000579466		A0A0J9YXY3	114 aa		5.12	□□□□□ -1.59
MSI2-208	ENST00000579466	DPM2	O94777	84 aa		5.12	□□□□□ -1.59
MSI2-208	ENST00000579466	FABP4	P15090	132 aa		5.12	□□□□□ -1.59
MSI2-208	ENST00000579466	RPL37	P61927	97 aa	Known RBP	5.12	□□□□□ -1.59
MSI2-208	ENST00000579466	TAL2	Q16559	108 aa		5.12	□□□□□ -1.59
MSI2-208	ENST00000579466	C5orf52	A6NGY3	159 aa		5.11	□□□□□ -1.59
MSI2-208	ENST00000579466	SNAPIN	O95295	136 aa		5.11	□□□□□ -1.59
MSI2-208	ENST00000579466	IGKC	P01834	107 aa		5.11	□□□□□ -1.59
MSI2-208	ENST00000579466	DHRS4-AS1	Q9P1J3	65 aa		5.11	□□□□□ -1.59
MSI2-208	ENST00000579466	SSPO	A2VEC9	5147 aa		5.1	□□□□□ -1.59
MSI2-208	ENST00000579466	SERF1A	O75920	110 aa		5.1	□□□□□ -1.59
MSI2-208	ENST00000579466	COX7B	P24311	80 aa		5.1	□□□□□ -1.59
MSI2-208	ENST00000579466	C1orf195	Q5TG92	126 aa		5.1	□□□□□ -1.59
MSI2-208	ENST00000579466		Q6Q795	121 aa		5.1	□□□□□ -1.59
MSI2-208	ENST00000579466	PRO1933	Q9H354	126 aa		5.1	□□□□□ -1.59
MSI2-208	ENST00000579466	CBY1	Q9Y3M2	126 aa		5.1	□□□□□ -1.59
MSI2-208	ENST00000579466	USH2A	O75445	5202 aa		5.1	□□□□□ -1.59
MSI2-208	ENST00000579466	LINC00310	P59036	64 aa		5.09	□□□□□ -1.59
MSI2-208	ENST00000579466	NDUFA5	Q16718	116 aa		5.09	□□□□□ -1.59
MSI2-208	ENST00000579466	C6orf99	Q4VX62	202 aa		5.09	□□□□□ -1.59
MSI2-208	ENST00000579466	SVBP	Q8N300	66 aa		5.09	□□□□□ -1.59
MSI2-208	ENST00000579466	LINC00308	Q8TCZ7	52 aa		5.09	□□□□□ -1.59
MSI2-208	ENST00000579466	SPANXC	Q9NY87	97 aa		5.09	□□□□□ -1.59
MSI2-208	ENST00000579466	KRTAP9-7	A8MTY7	169 aa		5.08	□□□□□ -1.6
MSI2-208	ENST00000579466	ELOF1	P60002	83 aa	Known RBP	5.08	□□□□□ -1.6
MSI2-208	ENST00000579466	CD164	Q04900	197 aa		5.08	□□□□□ -1.6
MSI2-208	ENST00000579466	YPEL4	Q96NS1	127 aa		5.08	□□□□□ -1.6
MSI2-208	ENST00000579466	HSPB8	Q9UJY1	196 aa		5.08	□□□□□ -1.6
MSI2-208	ENST00000579466	TEX49	A0A1B0GTD5	131 aa		5.07	□□□□□ -1.6
MSI2-208	ENST00000579466	TRGC2	P03986	189 aa		5.07	□□□□□ -1.6
MSI2-208	ENST00000579466	AKR1D1	P51857	326 aa		5.07	□□□□□ -1.6
MSI2-208	ENST00000579466	SPANXD	Q9BXN6	97 aa		5.07	□□□□□ -1.6
MSI2-208	ENST00000579466	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.06	□□□□□ -1.6
MSI2-208	ENST00000579466		E9PLD3	99 aa		5.06	□□□□□ -1.6
MSI2-208	ENST00000579466	SMIM29	Q86T20	159 aa		5.06	□□□□□ -1.6
MSI2-208	ENST00000579466	LITAF	Q99732	161 aa		5.06	□□□□□ -1.6
MSI2-208	ENST00000579466		Q5XG85	94 aa		5.04	□□□□□ -1.6
MSI2-208	ENST00000579466	TTTY13	Q9BZ97	58 aa		5.04	□□□□□ -1.6
MSI2-208	ENST00000579466	ZNF815P	A8K554	130 aa		5.03	□□□□□ -1.6
MSI2-208	ENST00000579466	PCP2	Q8IVA1	136 aa		5.03	□□□□□ -1.6
MSI2-208	ENST00000579466	TIMM17B	O60830	172 aa		5.01	□□□□□ -1.61
MSI2-208	ENST00000579466	TCL1B	O95988	128 aa		5.01	□□□□□ -1.61
MSI2-208	ENST00000579466	LINC00518	Q8N0U6	118 aa		5.01	□□□□□ -1.61
MSI2-208	ENST00000579466	IGLV5-48	A0A075B6I7	105 aa		5	□□□□□ -1.61
MSI2-208	ENST00000579466		A0A1B0GWB2	263 aa		5	□□□□□ -1.61
MSI2-208	ENST00000579466		A6NDN8	102 aa		5	□□□□□ -1.61
MSI2-208	ENST00000579466	ATP11AUN	Q6ZP68	121 aa		5	□□□□□ -1.61
MSI2-208	ENST00000579466	OBSCN-AS1	Q96MR7	158 aa		5	□□□□□ -1.61
MSI2-208	ENST00000579466		F8WEM9	126 aa		4.99	□□□□□ -1.61
MSI2-208	ENST00000579466	SYS1-DBNDD2	H3BUS1	97 aa		4.98	□□□□□ -1.61
MSI2-208	ENST00000579466	TRBV7-6	A0A0J9YX20	115 aa		4.97	□□□□□ -1.61
MSI2-208	ENST00000579466	SCGB1D4	Q6XE38	83 aa		4.97	□□□□□ -1.61
MSI2-208	ENST00000579466	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.96	□□□□□ -1.62
MSI2-208	ENST00000579466	CFC1	P0CG37	223 aa		4.96	□□□□□ -1.62
MSI2-208	ENST00000579466	LINC01545	Q5VT33	79 aa		4.95	□□□□□ -1.62
MSI2-208	ENST00000579466	KRTAP9-8	Q9BYQ0	159 aa		4.95	□□□□□ -1.62
MSI2-208	ENST00000579466	NHP2	Q9NX24	153 aa	Known RBP	4.95	□□□□□ -1.62
MSI2-208	ENST00000579466	SYNE2	Q8WXH0	6885 aa	Known RBP	4.95	□□□□□ -1.62
MSI2-208	ENST00000579466		Q75L30	129 aa		4.94	□□□□□ -1.62
MSI2-208	ENST00000579466	SLC7A5P1	Q8MH63	180 aa		4.94	□□□□□ -1.62
MSI2-208	ENST00000579466	SMIM11B	Q8TCY0	68 aa		4.94	□□□□□ -1.62
MSI2-208	ENST00000579466	TRBV7-7	A0A0K0K1E9	115 aa		4.93	□□□□□ -1.62
MSI2-208	ENST00000579466		A4D1N5	150 aa		4.93	□□□□□ -1.62
MSI2-208	ENST00000579466	IGFL1	Q6UW32	110 aa		4.93	□□□□□ -1.62
MSI2-208	ENST00000579466	MUSTN1	Q8IVN3	82 aa		4.93	□□□□□ -1.62
MSI2-208	ENST00000579466	CLEC2B	Q92478	149 aa		4.93	□□□□□ -1.62
MSI2-208	ENST00000579466		Q96NJ1	140 aa		4.93	□□□□□ -1.62
MSI2-208	ENST00000579466	MACF1	Q9UPN3	7388 aa	Known RBP	4.93	□□□□□ -1.62
MSI2-208	ENST00000579466	C20orf202	A1L168	122 aa		4.92	□□□□□ -1.62
MSI2-208	ENST00000579466	PET117	Q6UWS5	81 aa		4.92	□□□□□ -1.62
MSI2-208	ENST00000579466		Q6ZQY7	126 aa		4.92	□□□□□ -1.62
MSI2-208	ENST00000579466	COLCA2	A8K830	154 aa		4.91	□□□□□ -1.62
MSI2-208	ENST00000579466	KRTDAP	P60985	99 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 112 ms