RNA–Protein interactions for RNA: ENST00000577561.1

NUP85-205, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-205ENST00000577561 ZNF706Q9Y5V0 76 aaPredicted RBP11.42□□□□□ -0.58
NUP85-205ENST00000577561 SMCR5Q8TEV8 140 aa11.41□□□□□ -0.58
NUP85-205ENST00000577561 S100A6P06703 90 aa11.4□□□□□ -0.58
NUP85-205ENST00000577561 TRAV23DV6A0A075B6W5 121 aa11.39□□□□□ -0.59
NUP85-205ENST00000577561 SCGB1D4Q6XE38 83 aa11.39□□□□□ -0.59
NUP85-205ENST00000577561 TSPAN13O95857 204 aa11.38□□□□□ -0.59
NUP85-205ENST00000577561 SNRPEP62304 92 aaKnown RBP11.38□□□□□ -0.59
NUP85-205ENST00000577561 Q6ZRX8 168 aa11.37□□□□□ -0.59
NUP85-205ENST00000577561 SPANXDQ9BXN6 97 aa11.37□□□□□ -0.59
NUP85-205ENST00000577561 CBY1Q9Y3M2 126 aa11.37□□□□□ -0.59
NUP85-205ENST00000577561 ZNF73O43830 326 aaPredicted RBP11.36□□□□□ -0.59
NUP85-205ENST00000577561 PCP2Q8IVA1 136 aa11.36□□□□□ -0.59
NUP85-205ENST00000577561 C3orf22Q8N5N4 141 aa11.36□□□□□ -0.59
NUP85-205ENST00000577561 Q9BRP9 147 aa11.36□□□□□ -0.59
NUP85-205ENST00000577561 LINC00304Q8N9R0 145 aa11.35□□□□□ -0.59
NUP85-205ENST00000577561 LPAP08519 4548 aa11.34□□□□□ -0.59
NUP85-205ENST00000577561 ERC2-IT1O76042 136 aa11.34□□□□□ -0.59
NUP85-205ENST00000577561 OR13C6PQ8NH95 151 aa11.34□□□□□ -0.59
NUP85-205ENST00000577561 JOSD1Q15040 202 aaPredicted RBP11.33□□□□□ -0.6
NUP85-205ENST00000577561 LINC00518Q8N0U6 118 aa11.33□□□□□ -0.6
NUP85-205ENST00000577561 IFITM1P13164 125 aa11.32□□□□□ -0.6
NUP85-205ENST00000577561 PRR4Q16378 134 aa11.32□□□□□ -0.6
NUP85-205ENST00000577561 LINC00483Q53H64 154 aa11.32□□□□□ -0.6
NUP85-205ENST00000577561 Q6ZVH6 145 aa11.32□□□□□ -0.6
NUP85-205ENST00000577561 COPS9Q8WXC6 57 aa11.32□□□□□ -0.6
NUP85-205ENST00000577561 PPDPFQ9H3Y8 114 aa11.32□□□□□ -0.6
NUP85-205ENST00000577561 HINT1P49773 126 aaPredicted RBP11.3□□□□□ -0.6
NUP85-205ENST00000577561 CTAG1AP78358 180 aa11.3□□□□□ -0.6
NUP85-205ENST00000577561 GAGE2AQ6NT46 116 aa11.3□□□□□ -0.6
NUP85-205ENST00000577561 C5orf52A6NGY3 159 aa11.29□□□□□ -0.6
NUP85-205ENST00000577561 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
NUP85-205ENST00000577561 MUSTN1Q8IVN3 82 aa11.27□□□□□ -0.61
NUP85-205ENST00000577561 RNF213Q63HN8 5207 aa11.25□□□□□ -0.61
NUP85-205ENST00000577561 SPAG11AQ6PDA7 123 aa11.25□□□□□ -0.61
NUP85-205ENST00000577561 SCGB1D1O95968 90 aa11.24□□□□□ -0.61
NUP85-205ENST00000577561 C6orf99Q4VX62 202 aa11.22□□□□□ -0.61
NUP85-205ENST00000577561 Q8NBF4 154 aa11.22□□□□□ -0.61
NUP85-205ENST00000577561 DHRS4-AS1Q9P1J3 65 aa11.22□□□□□ -0.61
NUP85-205ENST00000577561 ELOF1P60002 83 aaKnown RBP11.21□□□□□ -0.61
NUP85-205ENST00000577561 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.61
NUP85-205ENST00000577561 IGLV9-49A0A0B4J1Y8 123 aa11.2□□□□□ -0.62
NUP85-205ENST00000577561 A6NDN8 102 aa11.2□□□□□ -0.62
NUP85-205ENST00000577561 COX7BP24311 80 aa11.2□□□□□ -0.62
NUP85-205ENST00000577561 ST20-AS1Q8NBB2 130 aa11.2□□□□□ -0.62
NUP85-205ENST00000577561 RETNLBQ9BQ08 111 aa11.2□□□□□ -0.62
NUP85-205ENST00000577561 MOBPQ13875 183 aa11.19□□□□□ -0.62
NUP85-205ENST00000577561 SSBP3-AS1Q7Z2R9 100 aa11.19□□□□□ -0.62
NUP85-205ENST00000577561 TRBV7-6A0A0J9YX20 115 aa11.18□□□□□ -0.62
NUP85-205ENST00000577561 TRAV13-2A0A0B4J235 113 aa11.17□□□□□ -0.62
NUP85-205ENST00000577561 SPINK1P00995 79 aa11.15□□□□□ -0.62
NUP85-205ENST00000577561 A0A1B0GWB2 263 aa11.14□□□□□ -0.63
NUP85-205ENST00000577561 COX8AP10176 69 aa11.14□□□□□ -0.63
NUP85-205ENST00000577561 SPRR1BP22528 89 aa11.14□□□□□ -0.63
NUP85-205ENST00000577561 A4D1N5 150 aa11.11□□□□□ -0.63
NUP85-205ENST00000577561 C9orf153Q5TBE3 101 aa11.11□□□□□ -0.63
NUP85-205ENST00000577561 SMIM11BQ8TCY0 68 aa11.11□□□□□ -0.63
NUP85-205ENST00000577561 IGLV7-46A0A075B6I9 117 aa11.1□□□□□ -0.63
NUP85-205ENST00000577561 DLEU1O43261 78 aa11.1□□□□□ -0.63
NUP85-205ENST00000577561 SLC25A34Q6PIV7 304 aa11.1□□□□□ -0.63
NUP85-205ENST00000577561 RPS29P62273 56 aaKnown RBP11.08□□□□□ -0.64
NUP85-205ENST00000577561 HIST1H4GQ99525 98 aa11.08□□□□□ -0.64
NUP85-205ENST00000577561 TAL2Q16559 108 aa11.07□□□□□ -0.64
NUP85-205ENST00000577561 TPRXLQ17RH7 258 aa11.07□□□□□ -0.64
NUP85-205ENST00000577561 LAMTOR3Q9UHA4 124 aa11.07□□□□□ -0.64
NUP85-205ENST00000577561 PAM16Q9Y3D7 125 aa11.07□□□□□ -0.64
NUP85-205ENST00000577561 SPATA45Q537H7 98 aa11.06□□□□□ -0.64
NUP85-205ENST00000577561 FP248Q71RG6 208 aaPredicted RBP11.06□□□□□ -0.64
NUP85-205ENST00000577561 DEFB105AQ8NG35 78 aa11.06□□□□□ -0.64
NUP85-205ENST00000577561 C14orf144Q96I85 54 aa11.06□□□□□ -0.64
NUP85-205ENST00000577561 TEX49A0A1B0GTD5 131 aa11.05□□□□□ -0.64
NUP85-205ENST00000577561 VAMP8Q9BV40 100 aa11.04□□□□□ -0.64
NUP85-205ENST00000577561 VAMP3Q15836 100 aa11.03□□□□□ -0.64
NUP85-205ENST00000577561 Q8N377 158 aa11.03□□□□□ -0.64
NUP85-205ENST00000577561 NHP2Q9NX24 153 aaKnown RBP11.03□□□□□ -0.64
NUP85-205ENST00000577561 IGLV5-48A0A075B6I7 105 aa11.02□□□□□ -0.65
NUP85-205ENST00000577561 LINC01547P58512 204 aaPredicted RBP11.02□□□□□ -0.65
NUP85-205ENST00000577561 Q1RN00 199 aa11.01□□□□□ -0.65
NUP85-205ENST00000577561 C12orf57Q99622 126 aa11.01□□□□□ -0.65
NUP85-205ENST00000577561 HIGD1BQ9P298 99 aa11.01□□□□□ -0.65
NUP85-205ENST00000577561 CDIP1Q9H305 208 aa11□□□□□ -0.65
NUP85-205ENST00000577561 SLC25A20O43772 301 aa10.99□□□□□ -0.65
NUP85-205ENST00000577561 SMIM29Q86T20 159 aa10.99□□□□□ -0.65
NUP85-205ENST00000577561 LINC00575Q6W349 94 aa10.98□□□□□ -0.65
NUP85-205ENST00000577561 MUC2Q02817 5179 aa10.97□□□□□ -0.65
NUP85-205ENST00000577561 C2orf91Q6ZV80 131 aa10.97□□□□□ -0.65
NUP85-205ENST00000577561 TMA7Q9Y2S6 64 aaKnown RBP10.97□□□□□ -0.65
NUP85-205ENST00000577561 PRO1933Q9H354 126 aa10.95□□□□□ -0.66
NUP85-205ENST00000577561 CFC1BP0CG36 223 aa10.94□□□□□ -0.66
NUP85-205ENST00000577561 CFC1P0CG37 223 aa10.94□□□□□ -0.66
NUP85-205ENST00000577561 PYY3Q5JQD4 70 aa10.94□□□□□ -0.66
NUP85-205ENST00000577561 hADV29S1A0JD25 119 aa10.93□□□□□ -0.66
NUP85-205ENST00000577561 KRTAP13-3Q3SY46 172 aa10.93□□□□□ -0.66
NUP85-205ENST00000577561 HRCT1Q6UXD1 115 aa10.93□□□□□ -0.66
NUP85-205ENST00000577561 KRTAP3-3Q9BYR6 98 aa10.93□□□□□ -0.66
NUP85-205ENST00000577561 KRTAP3-2Q9BYR7 98 aa10.93□□□□□ -0.66
NUP85-205ENST00000577561 CD164Q04900 197 aa10.92□□□□□ -0.66
NUP85-205ENST00000577561 BVES-AS1Q5T3Y7 98 aa10.92□□□□□ -0.66
NUP85-205ENST00000577561 RAB37Q96AX2 223 aa10.91□□□□□ -0.66
NUP85-205ENST00000577561 LIMD2Q9BT23 127 aa10.91□□□□□ -0.66
NUP85-205ENST00000577561 A0A0B4J2C4 111 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms