RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 HIST1H2BLQ99880 126 aa8.18□□□□□ -1.1
GGA3-203ENST00000577435 SPANXCQ9NY87 97 aa8.18□□□□□ -1.1
GGA3-203ENST00000577435 ZNF706Q9Y5V0 76 aaPredicted RBP8.18□□□□□ -1.1
GGA3-203ENST00000577435 S100A2P29034 98 aa8.17□□□□□ -1.1
GGA3-203ENST00000577435 CTAG1AP78358 180 aa8.16□□□□□ -1.1
GGA3-203ENST00000577435 CBY1Q9Y3M2 126 aa8.16□□□□□ -1.1
GGA3-203ENST00000577435 TRAV23DV6A0A075B6W5 121 aa8.15□□□□□ -1.1
GGA3-203ENST00000577435 Q6ZRX8 168 aa8.15□□□□□ -1.1
GGA3-203ENST00000577435 ATOH7Q8N100 152 aa8.15□□□□□ -1.1
GGA3-203ENST00000577435 SPANXDQ9BXN6 97 aa8.15□□□□□ -1.1
GGA3-203ENST00000577435 PPDPFQ9H3Y8 114 aa8.15□□□□□ -1.1
GGA3-203ENST00000577435 S100A6P06703 90 aa8.14□□□□□ -1.11
GGA3-203ENST00000577435 SCGB1D4Q6XE38 83 aa8.14□□□□□ -1.11
GGA3-203ENST00000577435 Q6ZVH6 145 aa8.14□□□□□ -1.11
GGA3-203ENST00000577435 LINC00518Q8N0U6 118 aa8.14□□□□□ -1.11
GGA3-203ENST00000577435 ZNF73O43830 326 aaPredicted RBP8.13□□□□□ -1.11
GGA3-203ENST00000577435 TSPAN13O95857 204 aa8.13□□□□□ -1.11
GGA3-203ENST00000577435 JOSD1Q15040 202 aaPredicted RBP8.13□□□□□ -1.11
GGA3-203ENST00000577435 LINC00483Q53H64 154 aa8.13□□□□□ -1.11
GGA3-203ENST00000577435 PCP2Q8IVA1 136 aa8.13□□□□□ -1.11
GGA3-203ENST00000577435 LINC00304Q8N9R0 145 aa8.13□□□□□ -1.11
GGA3-203ENST00000577435 Q9BRP9 147 aa8.13□□□□□ -1.11
GGA3-203ENST00000577435 LPAP08519 4548 aa8.13□□□□□ -1.11
GGA3-203ENST00000577435 ERC2-IT1O76042 136 aa8.12□□□□□ -1.11
GGA3-203ENST00000577435 IFITM1P13164 125 aa8.12□□□□□ -1.11
GGA3-203ENST00000577435 C3orf22Q8N5N4 141 aa8.12□□□□□ -1.11
GGA3-203ENST00000577435 COPS9Q8WXC6 57 aa8.12□□□□□ -1.11
GGA3-203ENST00000577435 HINT1P49773 126 aaPredicted RBP8.1□□□□□ -1.11
GGA3-203ENST00000577435 OR13C6PQ8NH95 151 aa8.1□□□□□ -1.11
GGA3-203ENST00000577435 C5orf52A6NGY3 159 aa8.09□□□□□ -1.11
GGA3-203ENST00000577435 PRR4Q16378 134 aa8.09□□□□□ -1.11
GGA3-203ENST00000577435 SPAG11AQ6PDA7 123 aa8.09□□□□□ -1.11
GGA3-203ENST00000577435 HSBP1L1C9JCN9 74 aa8.08□□□□□ -1.12
GGA3-203ENST00000577435 GAGE2AQ6NT46 116 aa8.08□□□□□ -1.12
GGA3-203ENST00000577435 MUSTN1Q8IVN3 82 aa8.07□□□□□ -1.12
GGA3-203ENST00000577435 TRBV7-6A0A0J9YX20 115 aa8.04□□□□□ -1.12
GGA3-203ENST00000577435 SSBP3-AS1Q7Z2R9 100 aa8.04□□□□□ -1.12
GGA3-203ENST00000577435 DHRS4-AS1Q9P1J3 65 aa8.04□□□□□ -1.12
GGA3-203ENST00000577435 SCGB1D1O95968 90 aa8.03□□□□□ -1.12
GGA3-203ENST00000577435 ELOF1P60002 83 aaKnown RBP8.03□□□□□ -1.12
GGA3-203ENST00000577435 C4orf48Q5BLP8 95 aa8.03□□□□□ -1.12
GGA3-203ENST00000577435 Q8NBF4 154 aa8.03□□□□□ -1.12
GGA3-203ENST00000577435 RNF213Q63HN8 5207 aa8.02□□□□□ -1.13
GGA3-203ENST00000577435 COX7BP24311 80 aa8.02□□□□□ -1.13
GGA3-203ENST00000577435 C6orf99Q4VX62 202 aa8.02□□□□□ -1.13
GGA3-203ENST00000577435 TRAV13-2A0A0B4J235 113 aa8.01□□□□□ -1.13
GGA3-203ENST00000577435 SPRR1BP22528 89 aa8.01□□□□□ -1.13
GGA3-203ENST00000577435 ST20-AS1Q8NBB2 130 aa8.01□□□□□ -1.13
GGA3-203ENST00000577435 A6NDN8 102 aa8□□□□□ -1.13
GGA3-203ENST00000577435 SPINK1P00995 79 aa8□□□□□ -1.13
GGA3-203ENST00000577435 IGLV9-49A0A0B4J1Y8 123 aa7.99□□□□□ -1.13
GGA3-203ENST00000577435 MOBPQ13875 183 aa7.99□□□□□ -1.13
GGA3-203ENST00000577435 RETNLBQ9BQ08 111 aa7.99□□□□□ -1.13
GGA3-203ENST00000577435 A0A1B0GWB2 263 aa7.98□□□□□ -1.13
GGA3-203ENST00000577435 COX8AP10176 69 aa7.98□□□□□ -1.13
GGA3-203ENST00000577435 A4D1N5 150 aa7.97□□□□□ -1.13
GGA3-203ENST00000577435 DLEU1O43261 78 aa7.97□□□□□ -1.13
GGA3-203ENST00000577435 RPS29P62273 56 aaKnown RBP7.97□□□□□ -1.13
GGA3-203ENST00000577435 SLC25A34Q6PIV7 304 aa7.97□□□□□ -1.13
GGA3-203ENST00000577435 IGLV7-46A0A075B6I9 117 aa7.95□□□□□ -1.14
GGA3-203ENST00000577435 FP248Q71RG6 208 aaPredicted RBP7.95□□□□□ -1.14
GGA3-203ENST00000577435 SMIM11BQ8TCY0 68 aa7.95□□□□□ -1.14
GGA3-203ENST00000577435 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
GGA3-203ENST00000577435 TAL2Q16559 108 aa7.93□□□□□ -1.14
GGA3-203ENST00000577435 C9orf153Q5TBE3 101 aa7.93□□□□□ -1.14
GGA3-203ENST00000577435 LAMTOR3Q9UHA4 124 aa7.93□□□□□ -1.14
GGA3-203ENST00000577435 TEX49A0A1B0GTD5 131 aa7.92□□□□□ -1.14
GGA3-203ENST00000577435 IGLV5-48A0A075B6I7 105 aa7.91□□□□□ -1.14
GGA3-203ENST00000577435 LINC01547P58512 204 aaPredicted RBP7.91□□□□□ -1.14
GGA3-203ENST00000577435 HIST1H4GQ99525 98 aa7.91□□□□□ -1.14
GGA3-203ENST00000577435 NHP2Q9NX24 153 aaKnown RBP7.91□□□□□ -1.14
GGA3-203ENST00000577435 HIGD1BQ9P298 99 aa7.91□□□□□ -1.14
GGA3-203ENST00000577435 VAMP3Q15836 100 aa7.9□□□□□ -1.14
GGA3-203ENST00000577435 SPATA45Q537H7 98 aa7.9□□□□□ -1.14
GGA3-203ENST00000577435 Q8N377 158 aa7.9□□□□□ -1.14
GGA3-203ENST00000577435 C14orf144Q96I85 54 aa7.9□□□□□ -1.14
GGA3-203ENST00000577435 PAM16Q9Y3D7 125 aa7.9□□□□□ -1.14
GGA3-203ENST00000577435 DEFB105AQ8NG35 78 aa7.89□□□□□ -1.15
GGA3-203ENST00000577435 VAMP8Q9BV40 100 aa7.89□□□□□ -1.15
GGA3-203ENST00000577435 SLC25A20O43772 301 aa7.88□□□□□ -1.15
GGA3-203ENST00000577435 SMIM29Q86T20 159 aa7.88□□□□□ -1.15
GGA3-203ENST00000577435 LINC00575Q6W349 94 aa7.87□□□□□ -1.15
GGA3-203ENST00000577435 CDIP1Q9H305 208 aa7.87□□□□□ -1.15
GGA3-203ENST00000577435 CD164Q04900 197 aa7.85□□□□□ -1.15
GGA3-203ENST00000577435 Q1RN00 199 aa7.85□□□□□ -1.15
GGA3-203ENST00000577435 C2orf91Q6ZV80 131 aa7.85□□□□□ -1.15
GGA3-203ENST00000577435 PRO1933Q9H354 126 aa7.85□□□□□ -1.15
GGA3-203ENST00000577435 CFC1BP0CG36 223 aa7.84□□□□□ -1.15
GGA3-203ENST00000577435 CFC1P0CG37 223 aa7.84□□□□□ -1.15
GGA3-203ENST00000577435 KRTAP13-3Q3SY46 172 aa7.84□□□□□ -1.15
GGA3-203ENST00000577435 C12orf57Q99622 126 aa7.84□□□□□ -1.15
GGA3-203ENST00000577435 hADV29S1A0JD25 119 aa7.83□□□□□ -1.16
GGA3-203ENST00000577435 PYY3Q5JQD4 70 aa7.83□□□□□ -1.16
GGA3-203ENST00000577435 BVES-AS1Q5T3Y7 98 aa7.83□□□□□ -1.16
GGA3-203ENST00000577435 MUC2Q02817 5179 aa7.83□□□□□ -1.16
GGA3-203ENST00000577435 LIMD2Q9BT23 127 aa7.82□□□□□ -1.16
GGA3-203ENST00000577435 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
GGA3-203ENST00000577435 A0A0B4J2C4 111 aa7.81□□□□□ -1.16
GGA3-203ENST00000577435 Q5XG85 94 aa7.8□□□□□ -1.16
GGA3-203ENST00000577435 CEND1Q8N111 149 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms