RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 SS18L2Q9UHA2 77 aa3.11□□□□□ -1.91
CDC27-215ENST00000573550 PDZD2O15018 2839 aa3.11□□□□□ -1.91
CDC27-215ENST00000573550 TENM4Q6N022 2769 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 NIPBLQ6KC79 2804 aaeCLIP3.1□□□□□ -1.91
CDC27-215ENST00000573550 IGLV8-61A0A075B6I0 122 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 hADV29S1A0JD25 119 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 F8WDY8 70 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 IGLV6-57P01721 117 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 DEFB130BP0DP73 79 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 DEFB130AP0DP74 79 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 PFN2P35080 140 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 REG3AQ06141 175 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 C9orf153Q5TBE3 101 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 SERP2Q8N6R1 65 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 OR13C6PQ8NH95 151 aa3.1□□□□□ -1.91
CDC27-215ENST00000573550 CHCHD10Q8WYQ3 142 aaPredicted RBP3.1□□□□□ -1.91
CDC27-215ENST00000573550 NSD1Q96L73 2696 aaPredicted RBP3.1□□□□□ -1.91
CDC27-215ENST00000573550 HIVEP2P31629 2446 aa3.09□□□□□ -1.91
CDC27-215ENST00000573550 IGKV3OR2-268A0A0C4DH90 116 aa3.09□□□□□ -1.91
CDC27-215ENST00000573550 NDUFC2-KCTD14E9PQ53 114 aa3.09□□□□□ -1.91
CDC27-215ENST00000573550 TMEM258P61165 79 aa3.09□□□□□ -1.91
CDC27-215ENST00000573550 RPS28P62857 69 aaKnown RBP3.09□□□□□ -1.91
CDC27-215ENST00000573550 LINC00575Q6W349 94 aa3.09□□□□□ -1.91
CDC27-215ENST00000573550 C6orf223Q8N319 242 aa3.09□□□□□ -1.91
CDC27-215ENST00000573550 SMIM20Q8N5G0 67 aa3.09□□□□□ -1.91
CDC27-215ENST00000573550 Q8NAQ8 132 aa3.09□□□□□ -1.91
CDC27-215ENST00000573550 LINC00846Q9NV44 126 aa3.09□□□□□ -1.91
CDC27-215ENST00000573550 KMT2BQ9UMN6 2715 aaPredicted RBP3.08□□□□□ -1.92
CDC27-215ENST00000573550 J3KT08 172 aa3.08□□□□□ -1.92
CDC27-215ENST00000573550 ANGP03950 147 aaKnown RBP3.08□□□□□ -1.92
CDC27-215ENST00000573550 SPART-AS1P0CW21 52 aa3.08□□□□□ -1.92
CDC27-215ENST00000573550 DAD1P61803 113 aa3.08□□□□□ -1.92
CDC27-215ENST00000573550 SPAG11BQ08648 103 aa3.08□□□□□ -1.92
CDC27-215ENST00000573550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.08□□□□□ -1.92
CDC27-215ENST00000573550 LINC00269Q8N2A0 174 aa3.08□□□□□ -1.92
CDC27-215ENST00000573550 UBL5Q9BZL1 73 aa3.08□□□□□ -1.92
CDC27-215ENST00000573550 HELZ2Q9BYK8 2649 aaKnown RBP3.08□□□□□ -1.92
CDC27-215ENST00000573550 ITPR2Q14571 2701 aa3.07□□□□□ -1.92
CDC27-215ENST00000573550 ACANP16112 2415 aa3.07□□□□□ -1.92
CDC27-215ENST00000573550 NCR3O14931 201 aa3.07□□□□□ -1.92
CDC27-215ENST00000573550 C6orf99Q4VX62 202 aa3.07□□□□□ -1.92
CDC27-215ENST00000573550 Q6ZQT0 140 aa3.07□□□□□ -1.92
CDC27-215ENST00000573550 UPK3BQ9BT76 320 aa3.07□□□□□ -1.92
CDC27-215ENST00000573550 NOTCH2Q04721 2471 aa3.07□□□□□ -1.92
CDC27-215ENST00000573550 A0A1B0GW54 56 aa3.06□□□□□ -1.92
CDC27-215ENST00000573550 J3QKU1 62 aa3.06□□□□□ -1.92
CDC27-215ENST00000573550 ELOF1P60002 83 aaKnown RBP3.06□□□□□ -1.92
CDC27-215ENST00000573550 RBM3P98179 157 aaKnown RBP3.06□□□□□ -1.92
CDC27-215ENST00000573550 EGFEM1PQ0D2K5 195 aa3.06□□□□□ -1.92
CDC27-215ENST00000573550 DEFB135Q30KP9 77 aa3.06□□□□□ -1.92
CDC27-215ENST00000573550 WFDC9Q8NEX5 89 aa3.06□□□□□ -1.92
CDC27-215ENST00000573550 DIRC1Q969H9 104 aa3.06□□□□□ -1.92
CDC27-215ENST00000573550 C11orf68Q9H3H3 251 aaKnown RBP3.06□□□□□ -1.92
CDC27-215ENST00000573550 TRAV23DV6A0A075B6W5 121 aa3.05□□□□□ -1.92
CDC27-215ENST00000573550 A0A096LPF7 62 aa3.05□□□□□ -1.92
CDC27-215ENST00000573550 TRBV7-4A0A0J9YYF1 115 aa3.05□□□□□ -1.92
CDC27-215ENST00000573550 PANO1I0J062 215 aa3.05□□□□□ -1.92
CDC27-215ENST00000573550 PRB2P02812 416 aaPredicted RBP3.05□□□□□ -1.92
CDC27-215ENST00000573550 CLPSL2Q6UWE3 100 aa3.05□□□□□ -1.92
CDC27-215ENST00000573550 DSCR8Q96T75 97 aa3.05□□□□□ -1.92
CDC27-215ENST00000573550 FN1P02751 2386 aaKnown RBP3.05□□□□□ -1.92
CDC27-215ENST00000573550 ZNF469Q96JG9 3925 aaPredicted RBP3.04□□□□□ -1.92
CDC27-215ENST00000573550 TRAV7A0A075B6U4 112 aa3.04□□□□□ -1.92
CDC27-215ENST00000573550 LOC107984640A0A0U1RRK4 108 aa3.04□□□□□ -1.92
CDC27-215ENST00000573550 ZNF73O43830 326 aaPredicted RBP3.04□□□□□ -1.92
CDC27-215ENST00000573550 PRR4Q16378 134 aa3.04□□□□□ -1.92
CDC27-215ENST00000573550 Q8NDZ9 215 aa3.04□□□□□ -1.92
CDC27-215ENST00000573550 C6orf48Q9UBA6 75 aa3.04□□□□□ -1.92
CDC27-215ENST00000573550 FASNP49327 2511 aaKnown RBP3.03□□□□□ -1.92
CDC27-215ENST00000573550 VWFP04275 2813 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 HIVEP1P15822 2718 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 IGLV10-54A0A075B6I4 117 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 IGKV3D-7A0A0C4DH55 119 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 M0R378 163 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 ZNF861PO60384 105 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 COX7BP24311 80 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 ATP5EP56381 51 aaPredicted RBP3.03□□□□□ -1.92
CDC27-215ENST00000573550 KLKP1Q107X0 134 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 LINC01556Q5JQF7 62 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 KRTAP26-1Q6PEX3 210 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 ENHOQ6UWT2 76 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 UNQ6190/PRO20217Q6UXQ8 127 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 Q6ZQY7 126 aa3.03□□□□□ -1.92
CDC27-215ENST00000573550 TEP1Q99973 2627 aaKnown RBP3.02□□□□□ -1.93
CDC27-215ENST00000573550 A0A087WVE0 104 aa3.02□□□□□ -1.93
CDC27-215ENST00000573550 NDUFC1O43677 76 aa3.02□□□□□ -1.93
CDC27-215ENST00000573550 ERC2-IT1O76042 136 aa3.02□□□□□ -1.93
CDC27-215ENST00000573550 TLX1NBP0CAT3 122 aa3.02□□□□□ -1.93
CDC27-215ENST00000573550 PRR3P79522 188 aaKnown RBP3.02□□□□□ -1.93
CDC27-215ENST00000573550 C9orf116Q5BN46 136 aaPredicted RBP3.02□□□□□ -1.93
CDC27-215ENST00000573550 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
CDC27-215ENST00000573550 LAMTOR3Q9UHA4 124 aa3.02□□□□□ -1.93
CDC27-215ENST00000573550 KLK12Q9UKR0 248 aa3.02□□□□□ -1.93
CDC27-215ENST00000573550 TENM1Q9UKZ4 2725 aa3.02□□□□□ -1.93
CDC27-215ENST00000573550 OTOGQ6ZRI0 2925 aa3.01□□□□□ -1.93
CDC27-215ENST00000573550 C15orf56Q8N910 161 aa3.01□□□□□ -1.93
CDC27-215ENST00000573550 CAMK2N2Q96S95 79 aa3.01□□□□□ -1.93
CDC27-215ENST00000573550 KCNQ1DNQ9H478 68 aa3.01□□□□□ -1.93
CDC27-215ENST00000573550 NBEAL2Q6ZNJ1 2754 aa3.01□□□□□ -1.93
CDC27-215ENST00000573550 ANK3Q12955 4377 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms