RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 TRAV23DV6A0A075B6W5 121 aa12.17□□□□□ -0.46
CHMP6-204ENST00000572778 B5MCH6 92 aa12.17□□□□□ -0.46
CHMP6-204ENST00000572778 OR13C6PQ8NH95 151 aa12.17□□□□□ -0.46
CHMP6-204ENST00000572778 SPRR4Q96PI1 79 aa12.16□□□□□ -0.46
CHMP6-204ENST00000572778 ZNF706Q9Y5V0 76 aaPredicted RBP12.16□□□□□ -0.46
CHMP6-204ENST00000572778 SPANXDQ9BXN6 97 aa12.15□□□□□ -0.46
CHMP6-204ENST00000572778 HSBP1L1C9JCN9 74 aa12.14□□□□□ -0.47
CHMP6-204ENST00000572778 TSPAN13O95857 204 aa12.14□□□□□ -0.47
CHMP6-204ENST00000572778 C5orf52A6NGY3 159 aa12.12□□□□□ -0.47
CHMP6-204ENST00000572778 ZNF73O43830 326 aaPredicted RBP12.12□□□□□ -0.47
CHMP6-204ENST00000572778 CBY1Q9Y3M2 126 aa12.12□□□□□ -0.47
CHMP6-204ENST00000572778 SCGB1D1O95968 90 aa12.11□□□□□ -0.47
CHMP6-204ENST00000572778 Q6ZRX8 168 aa12.11□□□□□ -0.47
CHMP6-204ENST00000572778 LINC00518Q8N0U6 118 aa12.11□□□□□ -0.47
CHMP6-204ENST00000572778 C3orf22Q8N5N4 141 aa12.1□□□□□ -0.47
CHMP6-204ENST00000572778 COPS9Q8WXC6 57 aa12.1□□□□□ -0.47
CHMP6-204ENST00000572778 Q9BRP9 147 aa12.1□□□□□ -0.47
CHMP6-204ENST00000572778 PPDPFQ9H3Y8 114 aa12.1□□□□□ -0.47
CHMP6-204ENST00000572778 ERC2-IT1O76042 136 aa12.09□□□□□ -0.47
CHMP6-204ENST00000572778 IFITM1P13164 125 aa12.09□□□□□ -0.47
CHMP6-204ENST00000572778 HINT1P49773 126 aaPredicted RBP12.09□□□□□ -0.47
CHMP6-204ENST00000572778 Q6ZVH6 145 aa12.09□□□□□ -0.47
CHMP6-204ENST00000572778 JOSD1Q15040 202 aaPredicted RBP12.08□□□□□ -0.48
CHMP6-204ENST00000572778 MUSTN1Q8IVN3 82 aa12.08□□□□□ -0.48
CHMP6-204ENST00000572778 GAGE2AQ6NT46 116 aa12.07□□□□□ -0.48
CHMP6-204ENST00000572778 LINC00304Q8N9R0 145 aa12.07□□□□□ -0.48
CHMP6-204ENST00000572778 LRP2P98164 4655 aa12.04□□□□□ -0.48
CHMP6-204ENST00000572778 PRR4Q16378 134 aa12.04□□□□□ -0.48
CHMP6-204ENST00000572778 UBR4Q5T4S7 5183 aa12.02□□□□□ -0.48
CHMP6-204ENST00000572778 LINC00483Q53H64 154 aa12.02□□□□□ -0.49
CHMP6-204ENST00000572778 A6NDN8 102 aa12.01□□□□□ -0.49
CHMP6-204ENST00000572778 C6orf99Q4VX62 202 aa11.99□□□□□ -0.49
CHMP6-204ENST00000572778 COX7BP24311 80 aa11.98□□□□□ -0.49
CHMP6-204ENST00000572778 IGLV9-49A0A0B4J1Y8 123 aa11.97□□□□□ -0.49
CHMP6-204ENST00000572778 ST20-AS1Q8NBB2 130 aa11.97□□□□□ -0.49
CHMP6-204ENST00000572778 ELOF1P60002 83 aaKnown RBP11.96□□□□□ -0.49
CHMP6-204ENST00000572778 C4orf48Q5BLP8 95 aa11.96□□□□□ -0.49
CHMP6-204ENST00000572778 DHRS4-AS1Q9P1J3 65 aa11.96□□□□□ -0.49
CHMP6-204ENST00000572778 LPAP08519 4548 aa11.96□□□□□ -0.5
CHMP6-204ENST00000572778 SPAG11AQ6PDA7 123 aa11.95□□□□□ -0.5
CHMP6-204ENST00000572778 Q8NBF4 154 aa11.95□□□□□ -0.5
CHMP6-204ENST00000572778 TRAV13-2A0A0B4J235 113 aa11.94□□□□□ -0.5
CHMP6-204ENST00000572778 COX8AP10176 69 aa11.93□□□□□ -0.5
CHMP6-204ENST00000572778 MOBPQ13875 183 aa11.93□□□□□ -0.5
CHMP6-204ENST00000572778 RETNLBQ9BQ08 111 aa11.93□□□□□ -0.5
CHMP6-204ENST00000572778 CTAG1AP78358 180 aa11.92□□□□□ -0.5
CHMP6-204ENST00000572778 TRBV7-6A0A0J9YX20 115 aa11.91□□□□□ -0.5
CHMP6-204ENST00000572778 A4D1N5 150 aa11.91□□□□□ -0.5
CHMP6-204ENST00000572778 PAM16Q9Y3D7 125 aa11.91□□□□□ -0.5
CHMP6-204ENST00000572778 C14orf144Q96I85 54 aa11.9□□□□□ -0.5
CHMP6-204ENST00000572778 HIST1H4GQ99525 98 aa11.9□□□□□ -0.5
CHMP6-204ENST00000572778 A0A1B0GWB2 263 aa11.89□□□□□ -0.51
CHMP6-204ENST00000572778 SPATA45Q537H7 98 aa11.89□□□□□ -0.51
CHMP6-204ENST00000572778 SSBP3-AS1Q7Z2R9 100 aa11.89□□□□□ -0.51
CHMP6-204ENST00000572778 SMIM11BQ8TCY0 68 aa11.89□□□□□ -0.51
CHMP6-204ENST00000572778 DLEU1O43261 78 aa11.88□□□□□ -0.51
CHMP6-204ENST00000572778 C9orf153Q5TBE3 101 aa11.88□□□□□ -0.51
CHMP6-204ENST00000572778 VAMP8Q9BV40 100 aa11.88□□□□□ -0.51
CHMP6-204ENST00000572778 SPRR1BP22528 89 aa11.85□□□□□ -0.51
CHMP6-204ENST00000572778 TAL2Q16559 108 aa11.85□□□□□ -0.51
CHMP6-204ENST00000572778 DEFB105AQ8NG35 78 aa11.85□□□□□ -0.51
CHMP6-204ENST00000572778 SPINK1P00995 79 aa11.84□□□□□ -0.51
CHMP6-204ENST00000572778 SLC25A34Q6PIV7 304 aa11.84□□□□□ -0.51
CHMP6-204ENST00000572778 C12orf57Q99622 126 aa11.84□□□□□ -0.51
CHMP6-204ENST00000572778 TMA7Q9Y2S6 64 aaKnown RBP11.84□□□□□ -0.51
CHMP6-204ENST00000572778 LAMTOR3Q9UHA4 124 aa11.82□□□□□ -0.52
CHMP6-204ENST00000572778 VAMP3Q15836 100 aa11.8□□□□□ -0.52
CHMP6-204ENST00000572778 IGLV7-46A0A075B6I9 117 aa11.79□□□□□ -0.52
CHMP6-204ENST00000572778 TEX49A0A1B0GTD5 131 aa11.79□□□□□ -0.52
CHMP6-204ENST00000572778 NHP2Q9NX24 153 aaKnown RBP11.79□□□□□ -0.52
CHMP6-204ENST00000572778 HIGD1BQ9P298 99 aa11.79□□□□□ -0.52
CHMP6-204ENST00000572778 Q1RN00 199 aa11.77□□□□□ -0.53
CHMP6-204ENST00000572778 SLC25A20O43772 301 aa11.76□□□□□ -0.53
CHMP6-204ENST00000572778 PYY3Q5JQD4 70 aa11.76□□□□□ -0.53
CHMP6-204ENST00000572778 C2orf91Q6ZV80 131 aa11.76□□□□□ -0.53
CHMP6-204ENST00000572778 RPS29P62273 56 aaKnown RBP11.74□□□□□ -0.53
CHMP6-204ENST00000572778 IGLV5-48A0A075B6I7 105 aa11.73□□□□□ -0.53
CHMP6-204ENST00000572778 LINC01547P58512 204 aaPredicted RBP11.73□□□□□ -0.53
CHMP6-204ENST00000572778 LINC00575Q6W349 94 aa11.73□□□□□ -0.53
CHMP6-204ENST00000572778 H7C2G1 150 aa11.72□□□□□ -0.53
CHMP6-204ENST00000572778 FP248Q71RG6 208 aaPredicted RBP11.72□□□□□ -0.53
CHMP6-204ENST00000572778 RAB37Q96AX2 223 aa11.72□□□□□ -0.53
CHMP6-204ENST00000572778 CFC1BP0CG36 223 aa11.71□□□□□ -0.53
CHMP6-204ENST00000572778 CFC1P0CG37 223 aa11.71□□□□□ -0.53
CHMP6-204ENST00000572778 TPRXLQ17RH7 258 aa11.71□□□□□ -0.53
CHMP6-204ENST00000572778 Q8N377 158 aa11.71□□□□□ -0.53
CHMP6-204ENST00000572778 HRCT1Q6UXD1 115 aa11.7□□□□□ -0.54
CHMP6-204ENST00000572778 SMIM29Q86T20 159 aa11.7□□□□□ -0.54
CHMP6-204ENST00000572778 CDIP1Q9H305 208 aa11.7□□□□□ -0.54
CHMP6-204ENST00000572778 hADV29S1A0JD25 119 aa11.69□□□□□ -0.54
CHMP6-204ENST00000572778 BVES-AS1Q5T3Y7 98 aa11.69□□□□□ -0.54
CHMP6-204ENST00000572778 CEND1Q8N111 149 aa11.68□□□□□ -0.54
CHMP6-204ENST00000572778 PRO1933Q9H354 126 aa11.68□□□□□ -0.54
CHMP6-204ENST00000572778 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
CHMP6-204ENST00000572778 Q6ZQY7 126 aa11.66□□□□□ -0.54
CHMP6-204ENST00000572778 RNF213Q63HN8 5207 aa11.66□□□□□ -0.54
CHMP6-204ENST00000572778 TMEM238LA0A1B0GVL6 79 aa11.63□□□□□ -0.55
CHMP6-204ENST00000572778 A6NJY4 79 aa11.63□□□□□ -0.55
CHMP6-204ENST00000572778 LIMD2Q9BT23 127 aa11.63□□□□□ -0.55
CHMP6-204ENST00000572778 FXYD2P54710 66 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms