RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TRBV10-3A0A0K0K1G6 114 aa5.09□□□□□ -1.59
SMG6-210ENST00000572205 HIST3H2BBQ8N257 126 aa5.09□□□□□ -1.59
SMG6-210ENST00000572205 IGLV6-57P01721 117 aa5.08□□□□□ -1.6
SMG6-210ENST00000572205 HERVK_113P61574 105 aa5.08□□□□□ -1.6
SMG6-210ENST00000572205 SMCR5Q8TEV8 140 aa5.08□□□□□ -1.6
SMG6-210ENST00000572205 HIST1H2BLQ99880 126 aa5.08□□□□□ -1.6
SMG6-210ENST00000572205 TRBV10-2A0A0K0K1G8 114 aa5.07□□□□□ -1.6
SMG6-210ENST00000572205 NDUFC2O95298 119 aa5.07□□□□□ -1.6
SMG6-210ENST00000572205 LGALS3P17931 250 aaKnown RBP5.07□□□□□ -1.6
SMG6-210ENST00000572205 S100A1P23297 94 aa5.07□□□□□ -1.6
SMG6-210ENST00000572205 FAM19A1Q7Z5A9 133 aa5.07□□□□□ -1.6
SMG6-210ENST00000572205 LINC00337Q8N6G1 96 aa5.07□□□□□ -1.6
SMG6-210ENST00000572205 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
SMG6-210ENST00000572205 MUC2Q02817 5179 aa5.06□□□□□ -1.6
SMG6-210ENST00000572205 TIMM17BO60830 172 aa5.06□□□□□ -1.6
SMG6-210ENST00000572205 RPL13AP40429 203 aaKnown RBP5.06□□□□□ -1.6
SMG6-210ENST00000572205 UBE2AP49459 152 aa5.06□□□□□ -1.6
SMG6-210ENST00000572205 KRTDAPP60985 99 aa5.06□□□□□ -1.6
SMG6-210ENST00000572205 FAM229BQ4G0N7 80 aa5.06□□□□□ -1.6
SMG6-210ENST00000572205 MPLKIPQ8TAP9 179 aa5.06□□□□□ -1.6
SMG6-210ENST00000572205 Q9BRP9 147 aa5.06□□□□□ -1.6
SMG6-210ENST00000572205 SPANXB1Q9NS25 103 aaPredicted RBP5.06□□□□□ -1.6
SMG6-210ENST00000572205 LINC00587B1AMM8 73 aa5.05□□□□□ -1.6
SMG6-210ENST00000572205 ATOH7Q8N100 152 aa5.05□□□□□ -1.6
SMG6-210ENST00000572205 LINC00308Q8TCZ7 52 aa5.05□□□□□ -1.6
SMG6-210ENST00000572205 SPRR4Q96PI1 79 aa5.05□□□□□ -1.6
SMG6-210ENST00000572205 ZNF815PA8K554 130 aa5.04□□□□□ -1.6
SMG6-210ENST00000572205 ERC2-IT1O76042 136 aa5.04□□□□□ -1.6
SMG6-210ENST00000572205 NPC2P61916 151 aa5.04□□□□□ -1.6
SMG6-210ENST00000572205 LINC00483Q53H64 154 aa5.04□□□□□ -1.6
SMG6-210ENST00000572205 PCP2Q8IVA1 136 aa5.04□□□□□ -1.6
SMG6-210ENST00000572205 C3orf22Q8N5N4 141 aa5.04□□□□□ -1.6
SMG6-210ENST00000572205 CRYGAP11844 174 aa5.03□□□□□ -1.6
SMG6-210ENST00000572205 DDTP30046 118 aa5.03□□□□□ -1.6
SMG6-210ENST00000572205 SPANXDQ9BXN6 97 aa5.03□□□□□ -1.6
SMG6-210ENST00000572205 SPANXCQ9NY87 97 aa5.03□□□□□ -1.6
SMG6-210ENST00000572205 Q6ZRX8 168 aa5.02□□□□□ -1.61
SMG6-210ENST00000572205 HIGD2AQ9BW72 106 aa5.02□□□□□ -1.61
SMG6-210ENST00000572205 PPDPFQ9H3Y8 114 aa5.02□□□□□ -1.61
SMG6-210ENST00000572205 TRAV23DV6A0A075B6W5 121 aa5□□□□□ -1.61
SMG6-210ENST00000572205 TYMSOSQ8TAI1 123 aa5□□□□□ -1.61
SMG6-210ENST00000572205 C20orf202A1L168 122 aa4.99□□□□□ -1.61
SMG6-210ENST00000572205 ZNF73O43830 326 aaPredicted RBP4.99□□□□□ -1.61
SMG6-210ENST00000572205 ETDCA0A1B0GVM5 59 aa4.98□□□□□ -1.61
SMG6-210ENST00000572205 MIEN1Q9BRT3 115 aa4.98□□□□□ -1.61
SMG6-210ENST00000572205 LINC00304Q8N9R0 145 aa4.97□□□□□ -1.61
SMG6-210ENST00000572205 ELOF1P60002 83 aaKnown RBP4.96□□□□□ -1.62
SMG6-210ENST00000572205 ST20-AS1Q8NBB2 130 aa4.96□□□□□ -1.62
SMG6-210ENST00000572205 TSPAN13O95857 204 aa4.95□□□□□ -1.62
SMG6-210ENST00000572205 SPRR1BP22528 89 aa4.95□□□□□ -1.62
SMG6-210ENST00000572205 S100A7L2Q5SY68 101 aa4.95□□□□□ -1.62
SMG6-210ENST00000572205 RETNLBQ9BQ08 111 aa4.95□□□□□ -1.62
SMG6-210ENST00000572205 ZNF706Q9Y5V0 76 aaPredicted RBP4.95□□□□□ -1.62
SMG6-210ENST00000572205 IFITM1P13164 125 aa4.94□□□□□ -1.62
SMG6-210ENST00000572205 AKR1D1P51857 326 aa4.94□□□□□ -1.62
SMG6-210ENST00000572205 LINC01547P58512 204 aaPredicted RBP4.94□□□□□ -1.62
SMG6-210ENST00000572205 CTAG1AP78358 180 aa4.94□□□□□ -1.62
SMG6-210ENST00000572205 SCGB1D4Q6XE38 83 aa4.94□□□□□ -1.62
SMG6-210ENST00000572205 Q6ZVH6 145 aa4.94□□□□□ -1.62
SMG6-210ENST00000572205 MUSTN1Q8IVN3 82 aa4.94□□□□□ -1.62
SMG6-210ENST00000572205 S100A2P29034 98 aa4.93□□□□□ -1.62
SMG6-210ENST00000572205 C6orf99Q4VX62 202 aa4.93□□□□□ -1.62
SMG6-210ENST00000572205 Q8NBF4 154 aa4.93□□□□□ -1.62
SMG6-210ENST00000572205 S100A6P06703 90 aa4.92□□□□□ -1.62
SMG6-210ENST00000572205 FAT4Q6V0I7 4981 aa4.91□□□□□ -1.62
SMG6-210ENST00000572205 TRBV7-6A0A0J9YX20 115 aa4.91□□□□□ -1.62
SMG6-210ENST00000572205 COX8AP10176 69 aa4.91□□□□□ -1.62
SMG6-210ENST00000572205 MOBPQ13875 183 aa4.91□□□□□ -1.62
SMG6-210ENST00000572205 PRR4Q16378 134 aa4.91□□□□□ -1.62
SMG6-210ENST00000572205 C2orf91Q6ZV80 131 aa4.91□□□□□ -1.62
SMG6-210ENST00000572205 SMIM29Q86T20 159 aa4.91□□□□□ -1.62
SMG6-210ENST00000572205 LINC00518Q8N0U6 118 aa4.91□□□□□ -1.62
SMG6-210ENST00000572205 IGLV5-48A0A075B6I7 105 aa4.9□□□□□ -1.63
SMG6-210ENST00000572205 DLEU1O43261 78 aa4.9□□□□□ -1.63
SMG6-210ENST00000572205 TPRXLQ17RH7 258 aa4.9□□□□□ -1.63
SMG6-210ENST00000572205 OR13C6PQ8NH95 151 aa4.9□□□□□ -1.63
SMG6-210ENST00000572205 SMIM11BQ8TCY0 68 aa4.9□□□□□ -1.63
SMG6-210ENST00000572205 COX7BP24311 80 aa4.89□□□□□ -1.63
SMG6-210ENST00000572205 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
SMG6-210ENST00000572205 S100A12P80511 92 aa4.89□□□□□ -1.63
SMG6-210ENST00000572205 JOSD1Q15040 202 aaPredicted RBP4.89□□□□□ -1.63
SMG6-210ENST00000572205 Q8N377 158 aa4.89□□□□□ -1.63
SMG6-210ENST00000572205 IGLV9-49A0A0B4J1Y8 123 aa4.88□□□□□ -1.63
SMG6-210ENST00000572205 SPAG11AQ6PDA7 123 aa4.88□□□□□ -1.63
SMG6-210ENST00000572205 DHRS4-AS1Q9P1J3 65 aa4.88□□□□□ -1.63
SMG6-210ENST00000572205 A0A1B0GWB2 263 aa4.87□□□□□ -1.63
SMG6-210ENST00000572205 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
SMG6-210ENST00000572205 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
SMG6-210ENST00000572205 PYY3Q5JQD4 70 aa4.87□□□□□ -1.63
SMG6-210ENST00000572205 SSBP3-AS1Q7Z2R9 100 aa4.87□□□□□ -1.63
SMG6-210ENST00000572205 CBY1Q9Y3M2 126 aa4.87□□□□□ -1.63
SMG6-210ENST00000572205 SPINK1P00995 79 aa4.86□□□□□ -1.63
SMG6-210ENST00000572205 COPS9Q8WXC6 57 aa4.86□□□□□ -1.63
SMG6-210ENST00000572205 HIGD1BQ9P298 99 aa4.86□□□□□ -1.63
SMG6-210ENST00000572205 TRAV13-2A0A0B4J235 113 aa4.85□□□□□ -1.63
SMG6-210ENST00000572205 A6NDN8 102 aa4.85□□□□□ -1.63
SMG6-210ENST00000572205 HSBP1L1C9JCN9 74 aa4.85□□□□□ -1.63
SMG6-210ENST00000572205 SPATA45Q537H7 98 aa4.85□□□□□ -1.63
SMG6-210ENST00000572205 FP248Q71RG6 208 aaPredicted RBP4.85□□□□□ -1.63
SMG6-210ENST00000572205 C14orf144Q96I85 54 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms