RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
CDT1-203ENST00000569140 Q6ZVH6 145 aa7.66□□□□□ -1.18
CDT1-203ENST00000569140 VAMP8Q9BV40 100 aa7.66□□□□□ -1.18
CDT1-203ENST00000569140 ANAPC11Q9NYG5 84 aa7.66□□□□□ -1.18
CDT1-203ENST00000569140 CBY1Q9Y3M2 126 aa7.66□□□□□ -1.18
CDT1-203ENST00000569140 SPATA45Q537H7 98 aa7.65□□□□□ -1.18
CDT1-203ENST00000569140 LINC00518Q8N0U6 118 aa7.65□□□□□ -1.18
CDT1-203ENST00000569140 A6NDN8 102 aa7.64□□□□□ -1.19
CDT1-203ENST00000569140 ZNF73O43830 326 aaPredicted RBP7.64□□□□□ -1.19
CDT1-203ENST00000569140 CRYGAP11844 174 aa7.64□□□□□ -1.19
CDT1-203ENST00000569140 HINT1P49773 126 aaPredicted RBP7.64□□□□□ -1.19
CDT1-203ENST00000569140 JOSD1Q15040 202 aaPredicted RBP7.64□□□□□ -1.19
CDT1-203ENST00000569140 B5MCH6 92 aa7.63□□□□□ -1.19
CDT1-203ENST00000569140 COX8AP10176 69 aa7.63□□□□□ -1.19
CDT1-203ENST00000569140 SMCR5Q8TEV8 140 aa7.63□□□□□ -1.19
CDT1-203ENST00000569140 ZNF706Q9Y5V0 76 aaPredicted RBP7.63□□□□□ -1.19
CDT1-203ENST00000569140 A0A087X002 238 aa7.62□□□□□ -1.19
CDT1-203ENST00000569140 KRTAP4-16G5E9R7 235 aaPredicted RBP7.62□□□□□ -1.19
CDT1-203ENST00000569140 Q6ZRX8 168 aa7.62□□□□□ -1.19
CDT1-203ENST00000569140 TYMSOSQ8TAI1 123 aa7.62□□□□□ -1.19
CDT1-203ENST00000569140 C14orf144Q96I85 54 aa7.62□□□□□ -1.19
CDT1-203ENST00000569140 HIST1H4GQ99525 98 aa7.62□□□□□ -1.19
CDT1-203ENST00000569140 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
CDT1-203ENST00000569140 SPRR4Q96PI1 79 aa7.6□□□□□ -1.19
CDT1-203ENST00000569140 TNXBP22105 4242 aa7.6□□□□□ -1.19
CDT1-203ENST00000569140 TRAV13-2A0A0B4J235 113 aa7.59□□□□□ -1.19
CDT1-203ENST00000569140 FAM229BQ4G0N7 80 aa7.59□□□□□ -1.19
CDT1-203ENST00000569140 C6orf99Q4VX62 202 aa7.59□□□□□ -1.19
CDT1-203ENST00000569140 Q9BRP9 147 aa7.59□□□□□ -1.19
CDT1-203ENST00000569140 ERC2-IT1O76042 136 aa7.58□□□□□ -1.2
CDT1-203ENST00000569140 GAGE2AQ6NT46 116 aa7.58□□□□□ -1.2
CDT1-203ENST00000569140 SLC25A34Q6PIV7 304 aa7.58□□□□□ -1.2
CDT1-203ENST00000569140 C12orf57Q99622 126 aa7.58□□□□□ -1.2
CDT1-203ENST00000569140 A4D1N5 150 aa7.57□□□□□ -1.2
CDT1-203ENST00000569140 DLEU1O43261 78 aa7.57□□□□□ -1.2
CDT1-203ENST00000569140 COX7BP24311 80 aa7.57□□□□□ -1.2
CDT1-203ENST00000569140 PYY3Q5JQD4 70 aa7.57□□□□□ -1.2
CDT1-203ENST00000569140 KRTAP13-2Q52LG2 175 aa7.56□□□□□ -1.2
CDT1-203ENST00000569140 TSPAN13O95857 204 aa7.55□□□□□ -1.2
CDT1-203ENST00000569140 C3orf22Q8N5N4 141 aa7.55□□□□□ -1.2
CDT1-203ENST00000569140 DHRS4-AS1Q9P1J3 65 aa7.54□□□□□ -1.2
CDT1-203ENST00000569140 IGLV9-49A0A0B4J1Y8 123 aa7.53□□□□□ -1.2
CDT1-203ENST00000569140 ELOF1P60002 83 aaKnown RBP7.53□□□□□ -1.2
CDT1-203ENST00000569140 ST20-AS1Q8NBB2 130 aa7.53□□□□□ -1.2
CDT1-203ENST00000569140 SMIM11BQ8TCY0 68 aa7.53□□□□□ -1.2
CDT1-203ENST00000569140 A0A1B0GWB2 263 aa7.52□□□□□ -1.21
CDT1-203ENST00000569140 LINC00304Q8N9R0 145 aa7.52□□□□□ -1.21
CDT1-203ENST00000569140 HIGD1BQ9P298 99 aa7.52□□□□□ -1.21
CDT1-203ENST00000569140 C2orf91Q6ZV80 131 aa7.51□□□□□ -1.21
CDT1-203ENST00000569140 RAB37Q96AX2 223 aa7.51□□□□□ -1.21
CDT1-203ENST00000569140 H7C2G1 150 aa7.5□□□□□ -1.21
CDT1-203ENST00000569140 MOBPQ13875 183 aa7.5□□□□□ -1.21
CDT1-203ENST00000569140 LINC00483Q53H64 154 aa7.5□□□□□ -1.21
CDT1-203ENST00000569140 C9orf153Q5TBE3 101 aa7.5□□□□□ -1.21
CDT1-203ENST00000569140 TRBV7-6A0A0J9YX20 115 aa7.49□□□□□ -1.21
CDT1-203ENST00000569140 VAMP3Q15836 100 aa7.49□□□□□ -1.21
CDT1-203ENST00000569140 DEFB105AQ8NG35 78 aa7.49□□□□□ -1.21
CDT1-203ENST00000569140 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
CDT1-203ENST00000569140 TAL2Q16559 108 aa7.48□□□□□ -1.21
CDT1-203ENST00000569140 CEND1Q8N111 149 aa7.48□□□□□ -1.21
CDT1-203ENST00000569140 Q8NBF4 154 aa7.48□□□□□ -1.21
CDT1-203ENST00000569140 TMEM238LA0A1B0GVL6 79 aa7.47□□□□□ -1.21
CDT1-203ENST00000569140 A6NJY4 79 aa7.47□□□□□ -1.21
CDT1-203ENST00000569140 SLC25A20O43772 301 aa7.47□□□□□ -1.21
CDT1-203ENST00000569140 PRR4Q16378 134 aa7.47□□□□□ -1.21
CDT1-203ENST00000569140 Q1RN00 199 aa7.47□□□□□ -1.21
CDT1-203ENST00000569140 C4orf48Q5BLP8 95 aa7.47□□□□□ -1.21
CDT1-203ENST00000569140 NHP2Q9NX24 153 aaKnown RBP7.47□□□□□ -1.21
CDT1-203ENST00000569140 CFC1BP0CG36 223 aa7.46□□□□□ -1.22
CDT1-203ENST00000569140 CFC1P0CG37 223 aa7.46□□□□□ -1.22
CDT1-203ENST00000569140 UQCR10Q9UDW1 63 aa7.45□□□□□ -1.22
CDT1-203ENST00000569140 A0A0B4J2C4 111 aa7.44□□□□□ -1.22
CDT1-203ENST00000569140 HSD52Q0P140 79 aa7.44□□□□□ -1.22
CDT1-203ENST00000569140 LAMTOR3Q9UHA4 124 aa7.44□□□□□ -1.22
CDT1-203ENST00000569140 FXYD2P54710 66 aa7.43□□□□□ -1.22
CDT1-203ENST00000569140 TEX49A0A1B0GTD5 131 aa7.42□□□□□ -1.22
CDT1-203ENST00000569140 BVES-AS1Q5T3Y7 98 aa7.42□□□□□ -1.22
CDT1-203ENST00000569140 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
CDT1-203ENST00000569140 RETNLBQ9BQ08 111 aa7.42□□□□□ -1.22
CDT1-203ENST00000569140 PRO1933Q9H354 126 aa7.42□□□□□ -1.22
CDT1-203ENST00000569140 hADV29S1A0JD25 119 aa7.41□□□□□ -1.22
CDT1-203ENST00000569140 LINC00575Q6W349 94 aa7.41□□□□□ -1.22
CDT1-203ENST00000569140 SPRR1BP22528 89 aa7.4□□□□□ -1.22
CDT1-203ENST00000569140 SSBP3-AS1Q7Z2R9 100 aa7.4□□□□□ -1.22
CDT1-203ENST00000569140 PRO1854Q9UHT4 67 aa7.4□□□□□ -1.22
CDT1-203ENST00000569140 SMIM6P0DI80 62 aa7.39□□□□□ -1.23
CDT1-203ENST00000569140 K7ERJ3 54 aa7.38□□□□□ -1.23
CDT1-203ENST00000569140 HRCT1Q6UXD1 115 aa7.38□□□□□ -1.23
CDT1-203ENST00000569140 Q6ZQY7 126 aa7.38□□□□□ -1.23
CDT1-203ENST00000569140 SNCGO76070 127 aa7.37□□□□□ -1.23
CDT1-203ENST00000569140 IGLV5-48A0A075B6I7 105 aa7.36□□□□□ -1.23
CDT1-203ENST00000569140 F8WEM9 126 aa7.36□□□□□ -1.23
CDT1-203ENST00000569140 SPINK1P00995 79 aa7.36□□□□□ -1.23
CDT1-203ENST00000569140 PSMB2P49721 201 aa7.36□□□□□ -1.23
CDT1-203ENST00000569140 LINC01547P58512 204 aaPredicted RBP7.36□□□□□ -1.23
CDT1-203ENST00000569140 Q8N377 158 aa7.35□□□□□ -1.23
CDT1-203ENST00000569140 H0YGX0 51 aa7.34□□□□□ -1.23
CDT1-203ENST00000569140 CTAG1AP78358 180 aa7.34□□□□□ -1.23
CDT1-203ENST00000569140 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.33□□□□□ -1.24
CDT1-203ENST00000569140 SMIM29Q86T20 159 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms