RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PLNP26678 52 aa8.7□□□□□ -1.02
HERPUD1-215ENST00000568676 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
HERPUD1-215ENST00000568676 TRBV10-2A0A0K0K1G8 114 aa8.68□□□□□ -1.02
HERPUD1-215ENST00000568676 COA6Q5JTJ3 125 aaKnown RBP8.68□□□□□ -1.02
HERPUD1-215ENST00000568676 Q6ZRX8 168 aa8.68□□□□□ -1.02
HERPUD1-215ENST00000568676 LOC107984156A0A0G2JMH3 177 aa8.67□□□□□ -1.02
HERPUD1-215ENST00000568676 DPM2O94777 84 aa8.67□□□□□ -1.02
HERPUD1-215ENST00000568676 ARL17AQ8IVW1 177 aa8.67□□□□□ -1.02
HERPUD1-215ENST00000568676 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
HERPUD1-215ENST00000568676 ERC2-IT1O76042 136 aa8.66□□□□□ -1.02
HERPUD1-215ENST00000568676 DDTP30046 118 aa8.66□□□□□ -1.02
HERPUD1-215ENST00000568676 HERVK_113P61574 105 aa8.66□□□□□ -1.02
HERPUD1-215ENST00000568676 JOSD1Q15040 202 aaPredicted RBP8.66□□□□□ -1.02
HERPUD1-215ENST00000568676 IGKCP01834 107 aa8.65□□□□□ -1.02
HERPUD1-215ENST00000568676 Q9BRP9 147 aa8.65□□□□□ -1.02
HERPUD1-215ENST00000568676 C5orf52A6NGY3 159 aa8.64□□□□□ -1.03
HERPUD1-215ENST00000568676 SYS1-DBNDD2H3BUS1 97 aa8.64□□□□□ -1.03
HERPUD1-215ENST00000568676 MT1HP80294 61 aa8.64□□□□□ -1.03
HERPUD1-215ENST00000568676 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
HERPUD1-215ENST00000568676 C9orf153Q5TBE3 101 aa8.64□□□□□ -1.03
HERPUD1-215ENST00000568676 PET117Q6UWS5 81 aa8.63□□□□□ -1.03
HERPUD1-215ENST00000568676 LIMD2Q9BT23 127 aa8.63□□□□□ -1.03
HERPUD1-215ENST00000568676 SPANXB1Q9NS25 103 aaPredicted RBP8.63□□□□□ -1.03
HERPUD1-215ENST00000568676 PMCHL2Q9BQD1 86 aa8.62□□□□□ -1.03
HERPUD1-215ENST00000568676 LEPROTO15243 131 aa8.61□□□□□ -1.03
HERPUD1-215ENST00000568676 NDUFC2O95298 119 aa8.6□□□□□ -1.03
HERPUD1-215ENST00000568676 S100A7L2Q5SY68 101 aa8.6□□□□□ -1.03
HERPUD1-215ENST00000568676 MIEN1Q9BRT3 115 aa8.6□□□□□ -1.03
HERPUD1-215ENST00000568676 IGLV8-61A0A075B6I0 122 aa8.59□□□□□ -1.03
HERPUD1-215ENST00000568676 IGLV6-57P01721 117 aa8.59□□□□□ -1.03
HERPUD1-215ENST00000568676 PCOTHQ58A44 107 aa8.59□□□□□ -1.03
HERPUD1-215ENST00000568676 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
HERPUD1-215ENST00000568676 CBY1Q9Y3M2 126 aa8.59□□□□□ -1.03
HERPUD1-215ENST00000568676 TRAV23DV6A0A075B6W5 121 aa8.58□□□□□ -1.04
HERPUD1-215ENST00000568676 C20orf202A1L168 122 aa8.58□□□□□ -1.04
HERPUD1-215ENST00000568676 J3QQQ9 107 aa8.58□□□□□ -1.04
HERPUD1-215ENST00000568676 S100A6P06703 90 aa8.58□□□□□ -1.04
HERPUD1-215ENST00000568676 C3orf79P0CE67 100 aa8.58□□□□□ -1.04
HERPUD1-215ENST00000568676 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
HERPUD1-215ENST00000568676 NMUP48645 174 aa8.58□□□□□ -1.04
HERPUD1-215ENST00000568676 KRTDAPP60985 99 aa8.58□□□□□ -1.04
HERPUD1-215ENST00000568676 SLC25A34Q6PIV7 304 aa8.58□□□□□ -1.04
HERPUD1-215ENST00000568676 S100A2P29034 98 aa8.57□□□□□ -1.04
HERPUD1-215ENST00000568676 AKR1D1P51857 326 aa8.57□□□□□ -1.04
HERPUD1-215ENST00000568676 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-215ENST00000568676 HINT1P49773 126 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-215ENST00000568676 E9PLD3 99 aa8.55□□□□□ -1.04
HERPUD1-215ENST00000568676 ZNF73O43830 326 aaPredicted RBP8.55□□□□□ -1.04
HERPUD1-215ENST00000568676 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
HERPUD1-215ENST00000568676 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
HERPUD1-215ENST00000568676 SPRR1BP22528 89 aa8.53□□□□□ -1.04
HERPUD1-215ENST00000568676 HIST3H2BBQ8N257 126 aa8.52□□□□□ -1.05
HERPUD1-215ENST00000568676 ST20-AS1Q8NBB2 130 aa8.52□□□□□ -1.05
HERPUD1-215ENST00000568676 C9orf92A6NGG3 77 aa8.51□□□□□ -1.05
HERPUD1-215ENST00000568676 CD164Q04900 197 aa8.5□□□□□ -1.05
HERPUD1-215ENST00000568676 LAMTOR3Q9UHA4 124 aa8.5□□□□□ -1.05
HERPUD1-215ENST00000568676 M0R2T5 61 aa8.49□□□□□ -1.05
HERPUD1-215ENST00000568676 HIST1H2BLQ99880 126 aa8.49□□□□□ -1.05
HERPUD1-215ENST00000568676 DHRS4-AS1Q9P1J3 65 aa8.49□□□□□ -1.05
HERPUD1-215ENST00000568676 A0A0J9YXY3 114 aa8.47□□□□□ -1.05
HERPUD1-215ENST00000568676 SNRPEP62304 92 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-215ENST00000568676 HRCT1Q6UXD1 115 aa8.47□□□□□ -1.05
HERPUD1-215ENST00000568676 ZNF815PA8K554 130 aa8.46□□□□□ -1.06
HERPUD1-215ENST00000568676 Q5XG85 94 aa8.46□□□□□ -1.06
HERPUD1-215ENST00000568676 SOSTDC1Q6X4U4 206 aa8.44□□□□□ -1.06
HERPUD1-215ENST00000568676 COX6B2Q6YFQ2 88 aa8.44□□□□□ -1.06
HERPUD1-215ENST00000568676 ATOH7Q8N100 152 aa8.44□□□□□ -1.06
HERPUD1-215ENST00000568676 PRO1933Q9H354 126 aa8.44□□□□□ -1.06
HERPUD1-215ENST00000568676 HSBP1L1C9JCN9 74 aa8.43□□□□□ -1.06
HERPUD1-215ENST00000568676 TIMM17BO60830 172 aa8.43□□□□□ -1.06
HERPUD1-215ENST00000568676 H7C2G1 150 aa8.42□□□□□ -1.06
HERPUD1-215ENST00000568676 RPL37P61927 97 aaKnown RBP8.42□□□□□ -1.06
HERPUD1-215ENST00000568676 SPANXCQ9NY87 97 aa8.42□□□□□ -1.06
HERPUD1-215ENST00000568676 NPC2P61916 151 aa8.41□□□□□ -1.06
HERPUD1-215ENST00000568676 ANKRD39Q53RE8 183 aa8.41□□□□□ -1.06
HERPUD1-215ENST00000568676 SCGB1D4Q6XE38 83 aa8.41□□□□□ -1.06
HERPUD1-215ENST00000568676 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
HERPUD1-215ENST00000568676 ADAMTSL4-AS1Q5T5F5 129 aa8.4□□□□□ -1.06
HERPUD1-215ENST00000568676 OR13C6PQ8NH95 151 aa8.4□□□□□ -1.06
HERPUD1-215ENST00000568676 SCGB1D1O95968 90 aa8.39□□□□□ -1.07
HERPUD1-215ENST00000568676 ELOF1P60002 83 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-215ENST00000568676 TAL2Q16559 108 aa8.39□□□□□ -1.07
HERPUD1-215ENST00000568676 COPS9Q8WXC6 57 aa8.39□□□□□ -1.07
HERPUD1-215ENST00000568676 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
HERPUD1-215ENST00000568676 TTTY13Q9BZ97 58 aa8.39□□□□□ -1.07
HERPUD1-215ENST00000568676 TEX49A0A1B0GTD5 131 aa8.38□□□□□ -1.07
HERPUD1-215ENST00000568676 LITAFQ99732 161 aa8.38□□□□□ -1.07
HERPUD1-215ENST00000568676 COX7BP24311 80 aa8.37□□□□□ -1.07
HERPUD1-215ENST00000568676 C1orf195Q5TG92 126 aa8.37□□□□□ -1.07
HERPUD1-215ENST00000568676 LINC00308Q8TCZ7 52 aa8.37□□□□□ -1.07
HERPUD1-215ENST00000568676 Q1RN00 199 aa8.36□□□□□ -1.07
HERPUD1-215ENST00000568676 LINC00518Q8N0U6 118 aa8.36□□□□□ -1.07
HERPUD1-215ENST00000568676 Q6ZVH6 145 aa8.35□□□□□ -1.07
HERPUD1-215ENST00000568676 PCP2Q8IVA1 136 aa8.35□□□□□ -1.07
HERPUD1-215ENST00000568676 TRBV7-6A0A0J9YX20 115 aa8.34□□□□□ -1.07
HERPUD1-215ENST00000568676 IFITM1P13164 125 aa8.34□□□□□ -1.07
HERPUD1-215ENST00000568676 DEFB105AQ8NG35 78 aa8.34□□□□□ -1.07
HERPUD1-215ENST00000568676 C6orf99Q4VX62 202 aa8.33□□□□□ -1.08
HERPUD1-215ENST00000568676 SMIM29Q86T20 159 aa8.33□□□□□ -1.08
HERPUD1-215ENST00000568676 FLGP20930 4061 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms