RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 PCLOQ9Y6V0 5065 aa7.42□□□□□ -1.22
SF3B3-208ENST00000567250 TRAV23DV6A0A075B6W5 121 aa7.41□□□□□ -1.22
SF3B3-208ENST00000567250 ETDCA0A1B0GVM5 59 aa7.41□□□□□ -1.22
SF3B3-208ENST00000567250 KRTAP29-1A8MX34 341 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-208ENST00000567250 IGLV6-57P01721 117 aa7.41□□□□□ -1.22
SF3B3-208ENST00000567250 MUSTN1Q8IVN3 82 aa7.41□□□□□ -1.22
SF3B3-208ENST00000567250 LINC00337Q8N6G1 96 aa7.41□□□□□ -1.22
SF3B3-208ENST00000567250 C14orf144Q96I85 54 aa7.41□□□□□ -1.22
SF3B3-208ENST00000567250 PKHD1L1Q86WI1 4243 aa7.4□□□□□ -1.22
SF3B3-208ENST00000567250 PRLHP81277 87 aa7.4□□□□□ -1.22
SF3B3-208ENST00000567250 OR13C6PQ8NH95 151 aa7.4□□□□□ -1.22
SF3B3-208ENST00000567250 HIST1H4GQ99525 98 aa7.4□□□□□ -1.22
SF3B3-208ENST00000567250 HIGD1BQ9P298 99 aa7.4□□□□□ -1.22
SF3B3-208ENST00000567250 MYCBP2O75592 4640 aa7.4□□□□□ -1.22
SF3B3-208ENST00000567250 SPRR1AP35321 89 aa7.39□□□□□ -1.23
SF3B3-208ENST00000567250 KRTAP13-1Q8IUC0 172 aa7.39□□□□□ -1.23
SF3B3-208ENST00000567250 TRAV13-2A0A0B4J235 113 aa7.38□□□□□ -1.23
SF3B3-208ENST00000567250 HINT1P49773 126 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-208ENST00000567250 ZNF73O43830 326 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-208ENST00000567250 SMIM6P0DI80 62 aa7.36□□□□□ -1.23
SF3B3-208ENST00000567250 LINC01600Q96MT4 127 aa7.36□□□□□ -1.23
SF3B3-208ENST00000567250 HIGD2AQ9BW72 106 aa7.36□□□□□ -1.23
SF3B3-208ENST00000567250 DMBT1Q9UGM3 2413 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-208ENST00000567250 A6NDN8 102 aa7.35□□□□□ -1.23
SF3B3-208ENST00000567250 KRTAP4-16G5E9R7 235 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-208ENST00000567250 TAL2Q16559 108 aa7.35□□□□□ -1.23
SF3B3-208ENST00000567250 A4D1N5 150 aa7.34□□□□□ -1.23
SF3B3-208ENST00000567250 Q6ZRX8 168 aa7.34□□□□□ -1.23
SF3B3-208ENST00000567250 C2orf91Q6ZV80 131 aa7.34□□□□□ -1.23
SF3B3-208ENST00000567250 UQCR10Q9UDW1 63 aa7.34□□□□□ -1.23
SF3B3-208ENST00000567250 ZNF706Q9Y5V0 76 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-208ENST00000567250 B5MCH6 92 aa7.33□□□□□ -1.24
SF3B3-208ENST00000567250 RPL13AP40429 203 aaKnown RBP7.32□□□□□ -1.24
SF3B3-208ENST00000567250 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
SF3B3-208ENST00000567250 C6orf99Q4VX62 202 aa7.31□□□□□ -1.24
SF3B3-208ENST00000567250 TRBV7-6A0A0J9YX20 115 aa7.3□□□□□ -1.24
SF3B3-208ENST00000567250 H3BS24 57 aa7.3□□□□□ -1.24
SF3B3-208ENST00000567250 COX7BP24311 80 aa7.3□□□□□ -1.24
SF3B3-208ENST00000567250 HSD52Q0P140 79 aa7.3□□□□□ -1.24
SF3B3-208ENST00000567250 CEND1Q8N111 149 aa7.3□□□□□ -1.24
SF3B3-208ENST00000567250 C12orf57Q99622 126 aa7.3□□□□□ -1.24
SF3B3-208ENST00000567250 LRP1Q07954 4544 aaKnown RBP7.29□□□□□ -1.24
SF3B3-208ENST00000567250 ELOF1P60002 83 aaKnown RBP7.29□□□□□ -1.24
SF3B3-208ENST00000567250 FAM229BQ4G0N7 80 aa7.29□□□□□ -1.24
SF3B3-208ENST00000567250 SMCR5Q8TEV8 140 aa7.29□□□□□ -1.24
SF3B3-208ENST00000567250 RAB37Q96AX2 223 aa7.29□□□□□ -1.24
SF3B3-208ENST00000567250 FAT3Q8TDW7 4589 aa7.28□□□□□ -1.24
SF3B3-208ENST00000567250 A0A0B4J2C4 111 aa7.28□□□□□ -1.24
SF3B3-208ENST00000567250 A0A1B0GWB2 263 aa7.28□□□□□ -1.24
SF3B3-208ENST00000567250 CRYGAP11844 174 aa7.28□□□□□ -1.24
SF3B3-208ENST00000567250 DHRS4-AS1Q9P1J3 65 aa7.28□□□□□ -1.24
SF3B3-208ENST00000567250 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
SF3B3-208ENST00000567250 SMIM11BQ8TCY0 68 aa7.27□□□□□ -1.25
SF3B3-208ENST00000567250 SPRR4Q96PI1 79 aa7.27□□□□□ -1.25
SF3B3-208ENST00000567250 Q9BRP9 147 aa7.27□□□□□ -1.25
SF3B3-208ENST00000567250 NHP2Q9NX24 153 aaKnown RBP7.27□□□□□ -1.25
SF3B3-208ENST00000567250 LOC105371267A0A1B0GV96 52 aa7.26□□□□□ -1.25
SF3B3-208ENST00000567250 VAMP3Q15836 100 aa7.26□□□□□ -1.25
SF3B3-208ENST00000567250 PRR26Q8N8Z3 221 aa7.26□□□□□ -1.25
SF3B3-208ENST00000567250 KRTAP10-8P60410 259 aa7.25□□□□□ -1.25
SF3B3-208ENST00000567250 TSTD3H0UI37 97 aa7.24□□□□□ -1.25
SF3B3-208ENST00000567250 CFC1BP0CG36 223 aa7.24□□□□□ -1.25
SF3B3-208ENST00000567250 CFC1P0CG37 223 aa7.24□□□□□ -1.25
SF3B3-208ENST00000567250 BVES-AS1Q5T3Y7 98 aa7.24□□□□□ -1.25
SF3B3-208ENST00000567250 A0A087X002 238 aa7.23□□□□□ -1.25
SF3B3-208ENST00000567250 SLC25A20O43772 301 aa7.23□□□□□ -1.25
SF3B3-208ENST00000567250 FXYD2P54710 66 aa7.23□□□□□ -1.25
SF3B3-208ENST00000567250 Q1RN00 199 aa7.23□□□□□ -1.25
SF3B3-208ENST00000567250 PRO1933Q9H354 126 aa7.23□□□□□ -1.25
SF3B3-208ENST00000567250 ERC2-IT1O76042 136 aa7.22□□□□□ -1.25
SF3B3-208ENST00000567250 LINC00483Q53H64 154 aa7.22□□□□□ -1.25
SF3B3-208ENST00000567250 GAGE2AQ6NT46 116 aa7.22□□□□□ -1.25
SF3B3-208ENST00000567250 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
SF3B3-208ENST00000567250 PRO1854Q9UHT4 67 aa7.22□□□□□ -1.25
SF3B3-208ENST00000567250 H7C2G1 150 aa7.21□□□□□ -1.26
SF3B3-208ENST00000567250 ANAPC11Q9NYG5 84 aa7.21□□□□□ -1.26
SF3B3-208ENST00000567250 M0R143 59 aa7.19□□□□□ -1.26
SF3B3-208ENST00000567250 SNCGO76070 127 aa7.18□□□□□ -1.26
SF3B3-208ENST00000567250 hADV29S1A0JD25 119 aa7.17□□□□□ -1.26
SF3B3-208ENST00000567250 H0YGX0 51 aa7.17□□□□□ -1.26
SF3B3-208ENST00000567250 KRTAP13-2Q52LG2 175 aa7.17□□□□□ -1.26
SF3B3-208ENST00000567250 LINC00575Q6W349 94 aa7.17□□□□□ -1.26
SF3B3-208ENST00000567250 ST20-AS1Q8NBB2 130 aa7.17□□□□□ -1.26
SF3B3-208ENST00000567250 SPRR1BP22528 89 aa7.16□□□□□ -1.26
SF3B3-208ENST00000567250 IGLV9-49A0A0B4J1Y8 123 aa7.15□□□□□ -1.26
SF3B3-208ENST00000567250 TEX49A0A1B0GTD5 131 aa7.15□□□□□ -1.26
SF3B3-208ENST00000567250 K7ERJ3 54 aa7.15□□□□□ -1.26
SF3B3-208ENST00000567250 CTAG1AP78358 180 aa7.15□□□□□ -1.26
SF3B3-208ENST00000567250 C3orf22Q8N5N4 141 aa7.15□□□□□ -1.26
SF3B3-208ENST00000567250 LINC00304Q8N9R0 145 aa7.15□□□□□ -1.26
SF3B3-208ENST00000567250 LAMTOR3Q9UHA4 124 aa7.15□□□□□ -1.26
SF3B3-208ENST00000567250 IGLV5-48A0A075B6I7 105 aa7.14□□□□□ -1.27
SF3B3-208ENST00000567250 TNXBP22105 4242 aa7.14□□□□□ -1.27
SF3B3-208ENST00000567250 PSMB2P49721 201 aa7.14□□□□□ -1.27
SF3B3-208ENST00000567250 C9orf153Q5TBE3 101 aa7.14□□□□□ -1.27
SF3B3-208ENST00000567250 Q8NBF4 154 aa7.14□□□□□ -1.27
SF3B3-208ENST00000567250 COX6CP09669 75 aa7.13□□□□□ -1.27
SF3B3-208ENST00000567250 MOBPQ13875 183 aa7.13□□□□□ -1.27
SF3B3-208ENST00000567250 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-208ENST00000567250 Q6ZQY7 126 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms