RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TRBV7-4A0A0J9YYF1 115 aa13.65□□□□□ -0.23
MAP1LC3B-206ENST00000564844 KRTAP1-1Q07627 177 aa13.62□□□□□ -0.23
MAP1LC3B-206ENST00000564844 C9orf66Q5T8R8 295 aa13.62□□□□□ -0.23
MAP1LC3B-206ENST00000564844 LYRM9A8MSI8 78 aa13.61□□□□□ -0.23
MAP1LC3B-206ENST00000564844 PRB2P02812 416 aaPredicted RBP13.61□□□□□ -0.23
MAP1LC3B-206ENST00000564844 Q6ZRU5 148 aa13.61□□□□□ -0.23
MAP1LC3B-206ENST00000564844 PDE6GP18545 87 aa13.6□□□□□ -0.23
MAP1LC3B-206ENST00000564844 WFDC10BQ8IUB3 73 aa13.6□□□□□ -0.23
MAP1LC3B-206ENST00000564844 HIGD2AQ9BW72 106 aa13.6□□□□□ -0.23
MAP1LC3B-206ENST00000564844 SMIM26A0A096LP01 95 aa13.6□□□□□ -0.23
MAP1LC3B-206ENST00000564844 ELOF1P60002 83 aaKnown RBP13.6□□□□□ -0.23
MAP1LC3B-206ENST00000564844 C16orf95Q9H693 158 aa13.6□□□□□ -0.23
MAP1LC3B-206ENST00000564844 RETNQ9HD89 108 aa13.59□□□□□ -0.23
MAP1LC3B-206ENST00000564844 LELP1Q5T871 98 aa13.58□□□□□ -0.24
MAP1LC3B-206ENST00000564844 FAM30AQ9NZY2 134 aa13.58□□□□□ -0.24
MAP1LC3B-206ENST00000564844 VPREB1P12018 145 aa13.57□□□□□ -0.24
MAP1LC3B-206ENST00000564844 KMT2BQ9UMN6 2715 aaPredicted RBP13.56□□□□□ -0.24
MAP1LC3B-206ENST00000564844 EPM2AB3EWF7 344 aa13.55□□□□□ -0.24
MAP1LC3B-206ENST00000564844 IGKV4-1P06312 121 aa13.55□□□□□ -0.24
MAP1LC3B-206ENST00000564844 PRR34Q9NV39 138 aa13.53□□□□□ -0.24
MAP1LC3B-206ENST00000564844 RPL37AP8A6NKH3 93 aa13.53□□□□□ -0.24
MAP1LC3B-206ENST00000564844 SPART-AS1P0CW21 52 aa13.52□□□□□ -0.24
MAP1LC3B-206ENST00000564844 INAFM1C9JVW0 142 aa13.52□□□□□ -0.25
MAP1LC3B-206ENST00000564844 BCE1O60756 84 aa13.51□□□□□ -0.25
MAP1LC3B-206ENST00000564844 PRR4Q16378 134 aa13.51□□□□□ -0.25
MAP1LC3B-206ENST00000564844 Q8NAQ8 132 aa13.51□□□□□ -0.25
MAP1LC3B-206ENST00000564844 Q6ZRP5 223 aa13.51□□□□□ -0.25
MAP1LC3B-206ENST00000564844 LINC00528Q8N1L1 170 aa13.51□□□□□ -0.25
MAP1LC3B-206ENST00000564844 J3QKU1 62 aa13.5□□□□□ -0.25
MAP1LC3B-206ENST00000564844 M0R378 163 aa13.49□□□□□ -0.25
MAP1LC3B-206ENST00000564844 PRYO14603 147 aa13.49□□□□□ -0.25
MAP1LC3B-206ENST00000564844 SMIM29Q86T20 159 aa13.48□□□□□ -0.25
MAP1LC3B-206ENST00000564844 IGKV2D-24A0A075B6R9 120 aa13.48□□□□□ -0.25
MAP1LC3B-206ENST00000564844 A0A0G2JQZ4 141 aa13.48□□□□□ -0.25
MAP1LC3B-206ENST00000564844 A0A1W2PNN7 141 aa13.48□□□□□ -0.25
MAP1LC3B-206ENST00000564844 FUSP35637 526 aaKnown RBP eCLIP13.48□□□□□ -0.25
MAP1LC3B-206ENST00000564844 APOC4P55056 127 aa13.45□□□□□ -0.26
MAP1LC3B-206ENST00000564844 OCR1Q9BZK8 76 aa13.45□□□□□ -0.26
MAP1LC3B-206ENST00000564844 NDUFC1O43677 76 aa13.45□□□□□ -0.26
MAP1LC3B-206ENST00000564844 CSMD3Q7Z407 3707 aa13.45□□□□□ -0.26
MAP1LC3B-206ENST00000564844 GVQW2A0A096LPI5 108 aaPredicted RBP13.45□□□□□ -0.26
MAP1LC3B-206ENST00000564844 SERTAD4-AS1Q5TG53 156 aa13.45□□□□□ -0.26
MAP1LC3B-206ENST00000564844 SRRM2Q9UQ35 2752 aaKnown RBP13.44□□□□□ -0.26
MAP1LC3B-206ENST00000564844 Q8N377 158 aa13.43□□□□□ -0.26
MAP1LC3B-206ENST00000564844 C15orf56Q8N910 161 aa13.43□□□□□ -0.26
MAP1LC3B-206ENST00000564844 ST20-AS1Q8NBB2 130 aa13.43□□□□□ -0.26
MAP1LC3B-206ENST00000564844 OXLD1Q5BKU9 147 aa13.43□□□□□ -0.26
MAP1LC3B-206ENST00000564844 NKAPP1Q8N9T2 125 aa13.43□□□□□ -0.26
MAP1LC3B-206ENST00000564844 DEFB116Q30KQ4 102 aa13.43□□□□□ -0.26
MAP1LC3B-206ENST00000564844 KPRPQ5T749 579 aaPredicted RBP13.42□□□□□ -0.26
MAP1LC3B-206ENST00000564844 FAM168BA1KXE4 195 aa13.41□□□□□ -0.26
MAP1LC3B-206ENST00000564844 EGFEM1PQ0D2K5 195 aa13.41□□□□□ -0.26
MAP1LC3B-206ENST00000564844 H3BQ85 93 aa13.4□□□□□ -0.26
MAP1LC3B-206ENST00000564844 Q6ZTC4 211 aa13.39□□□□□ -0.27
MAP1LC3B-206ENST00000564844 C7orf33Q8WU49 177 aa13.38□□□□□ -0.27
MAP1LC3B-206ENST00000564844 MGAM2Q2M2H8 2515 aa13.36□□□□□ -0.27
MAP1LC3B-206ENST00000564844 ESRGQ1W209 222 aa13.36□□□□□ -0.27
MAP1LC3B-206ENST00000564844 A0A1W2PNM2 257 aa13.36□□□□□ -0.27
MAP1LC3B-206ENST00000564844 SYCNQ0VAF6 134 aa13.33□□□□□ -0.27
MAP1LC3B-206ENST00000564844 KRTAP26-1Q6PEX3 210 aa13.33□□□□□ -0.27
MAP1LC3B-206ENST00000564844 PMAIP1Q13794 54 aa13.33□□□□□ -0.28
MAP1LC3B-206ENST00000564844 C1orf137Q5JT78 98 aa13.33□□□□□ -0.28
MAP1LC3B-206ENST00000564844 K7EQZ3 153 aa13.31□□□□□ -0.28
MAP1LC3B-206ENST00000564844 PSPHP1O15172 72 aa13.3□□□□□ -0.28
MAP1LC3B-206ENST00000564844 ERC2-IT1O76042 136 aa13.3□□□□□ -0.28
MAP1LC3B-206ENST00000564844 ATP5EP56381 51 aaPredicted RBP13.3□□□□□ -0.28
MAP1LC3B-206ENST00000564844 Q9BRP9 147 aa13.3□□□□□ -0.28
MAP1LC3B-206ENST00000564844 ANK2Q01484 3957 aa13.3□□□□□ -0.28
MAP1LC3B-206ENST00000564844 TENM2Q9NT68 2774 aa13.29□□□□□ -0.28
MAP1LC3B-206ENST00000564844 ETDCA0A1B0GVM5 59 aa13.27□□□□□ -0.28
MAP1LC3B-206ENST00000564844 UBE2BP63146 152 aa13.27□□□□□ -0.29
MAP1LC3B-206ENST00000564844 CASC10Q5T4H9 136 aa13.27□□□□□ -0.29
MAP1LC3B-206ENST00000564844 WFDC13Q8IUB5 93 aa13.25□□□□□ -0.29
MAP1LC3B-206ENST00000564844 C1orf64Q8NEQ6 169 aa13.25□□□□□ -0.29
MAP1LC3B-206ENST00000564844 KCNQ1DNQ9H478 68 aa13.24□□□□□ -0.29
MAP1LC3B-206ENST00000564844 DSCR10P59022 87 aa13.23□□□□□ -0.29
MAP1LC3B-206ENST00000564844 IGLV5-48A0A075B6I7 105 aa13.22□□□□□ -0.29
MAP1LC3B-206ENST00000564844 Q6ZRX8 168 aa13.21□□□□□ -0.29
MAP1LC3B-206ENST00000564844 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.19□□□□□ -0.3
MAP1LC3B-206ENST00000564844 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
MAP1LC3B-206ENST00000564844 STAB2Q8WWQ8 2551 aa13.18□□□□□ -0.3
MAP1LC3B-206ENST00000564844 RPL37AP61513 92 aaKnown RBP13.18□□□□□ -0.3
MAP1LC3B-206ENST00000564844 hDV103S1A0JD37 113 aa13.18□□□□□ -0.3
MAP1LC3B-206ENST00000564844 Q8NBF4 154 aa13.18□□□□□ -0.3
MAP1LC3B-206ENST00000564844 DEFB131BA0A096LNP1 70 aa13.16□□□□□ -0.3
MAP1LC3B-206ENST00000564844 KRTAP7-1Q8IUC3 87 aa13.14□□□□□ -0.31
MAP1LC3B-206ENST00000564844 DHRS4-AS1Q9P1J3 65 aa13.14□□□□□ -0.31
MAP1LC3B-206ENST00000564844 C4orf48Q5BLP8 95 aa13.13□□□□□ -0.31
MAP1LC3B-206ENST00000564844 IGLV1-50A0A075B6I6 118 aa13.12□□□□□ -0.31
MAP1LC3B-206ENST00000564844 IGKV2-24A0A0C4DH68 120 aa13.12□□□□□ -0.31
MAP1LC3B-206ENST00000564844 PSCAO43653 123 aa13.12□□□□□ -0.31
MAP1LC3B-206ENST00000564844 CD164Q04900 197 aa13.12□□□□□ -0.31
MAP1LC3B-206ENST00000564844 A8MU10 97 aa13.11□□□□□ -0.31
MAP1LC3B-206ENST00000564844 KRTAP10-11P60412 298 aa13.11□□□□□ -0.31
MAP1LC3B-206ENST00000564844 PRLHP81277 87 aa13.11□□□□□ -0.31
MAP1LC3B-206ENST00000564844 LINC00476Q8WZB0 136 aa13.11□□□□□ -0.31
MAP1LC3B-206ENST00000564844 A0A087WSZ3 146 aa13.09□□□□□ -0.31
MAP1LC3B-206ENST00000564844 A0A096LNI7 61 aa13.09□□□□□ -0.31
MAP1LC3B-206ENST00000564844 HCG22E2RYF7 251 aa13.09□□□□□ -0.31
MAP1LC3B-206ENST00000564844 TNP2Q05952 138 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms