RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.08□□□□□ -2.42
HMGB1P33-201ENST00000563485 STAB2Q8WWQ8 2551 aa-0.08□□□□□ -2.42
HMGB1P33-201ENST00000563485 COL14A1Q05707 1796 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 BCORQ6W2J9 1755 aa-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 KIF14Q15058 1648 aa-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 PCNX1Q96RV3 2341 aa-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 UBR3Q6ZT12 1888 aa-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 RGPD1P0DJD0 1748 aa-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 CYB5AP00167 134 aa-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 KLK9Q2XQG4 91 aa-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 APLNQ9ULZ1 77 aa-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 MAP1AP78559 2803 aaPredicted RBP-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 PREX1Q8TCU6 1659 aa-0.09□□□□□ -2.42
HMGB1P33-201ENST00000563485 CCDC88BA6NC98 1476 aa-0.1□□□□□ -2.42
HMGB1P33-201ENST00000563485 TIAM2Q8IVF5 1701 aa-0.1□□□□□ -2.42
HMGB1P33-201ENST00000563485 CDKN2A-AS1Q9UH64 79 aa-0.1□□□□□ -2.43
HMGB1P33-201ENST00000563485 URB2Q14146 1524 aaKnown RBP-0.1□□□□□ -2.43
HMGB1P33-201ENST00000563485 MAGI3Q5TCQ9 1506 aa-0.1□□□□□ -2.43
HMGB1P33-201ENST00000563485 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.1□□□□□ -2.43
HMGB1P33-201ENST00000563485 LRRC7Q96NW7 1537 aa-0.1□□□□□ -2.43
HMGB1P33-201ENST00000563485 RGPD2P0DJD1 1756 aa-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 USP32Q8NFA0 1604 aa-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 KANTRA0A1W2PQU2 76 aa-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 CEBPZOSA8MTT3 80 aa-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 NDUFB1O75438 58 aa-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 HMGA1P17096 107 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 RPL38P63173 70 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 TDRG1Q3Y452 100 aa-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 FXYD6Q9H0Q3 95 aa-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 SUPT6HQ7KZ85 1726 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 PDZD2O15018 2839 aa-0.11□□□□□ -2.43
HMGB1P33-201ENST00000563485 PTPN23Q9H3S7 1636 aa-0.12□□□□□ -2.43
HMGB1P33-201ENST00000563485 FLGP20930 4061 aaPredicted RBP-0.12□□□□□ -2.43
HMGB1P33-201ENST00000563485 LOC730098B7Z3J9 87 aa-0.12□□□□□ -2.43
HMGB1P33-201ENST00000563485 DEFB121Q5J5C9 76 aa-0.12□□□□□ -2.43
HMGB1P33-201ENST00000563485 GAFA1Q96PS6 74 aa-0.12□□□□□ -2.43
HMGB1P33-201ENST00000563485 PDE4DIPQ5VU43 2346 aa-0.12□□□□□ -2.43
HMGB1P33-201ENST00000563485 POLR1AO95602 1720 aaPredicted RBP-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 MUC12Q9UKN1 5478 aa-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 ADAMTS12P58397 1594 aa-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 TRAV21A0A0B4J279 112 aa-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 LCE6AA0A183 80 aa-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 AKAP13Q12802 2813 aa-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 HECTD1Q9ULT8 2610 aa-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 PRRC2CQ9Y520 2896 aaKnown RBP-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 SRRM2Q9UQ35 2752 aaKnown RBP-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 SCRIBQ14160 1630 aa-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 CICQ96RK0 1608 aaPredicted RBP-0.13□□□□□ -2.43
HMGB1P33-201ENST00000563485 LTN1O94822 1766 aa-0.14□□□□□ -2.43
HMGB1P33-201ENST00000563485 WIZO95785 1651 aa-0.14□□□□□ -2.43
HMGB1P33-201ENST00000563485 NBEAL1Q6ZS30 2694 aa-0.14□□□□□ -2.43
HMGB1P33-201ENST00000563485 NBASA2RRP1 2371 aa-0.14□□□□□ -2.43
HMGB1P33-201ENST00000563485 SPRR2AP35326 72 aa-0.14□□□□□ -2.43
HMGB1P33-201ENST00000563485 ATP5EP2Q5VTU8 51 aa-0.14□□□□□ -2.43
HMGB1P33-201ENST00000563485 ST20Q9HBF5 79 aa-0.14□□□□□ -2.43
HMGB1P33-201ENST00000563485 ABCC1P33527 1531 aa-0.14□□□□□ -2.43
HMGB1P33-201ENST00000563485 TGP01266 2768 aa-0.14□□□□□ -2.43
HMGB1P33-201ENST00000563485 LYSTQ99698 3801 aa-0.14□□□□□ -2.43
HMGB1P33-201ENST00000563485 NWD1Q149M9 1564 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 DIP2BQ9P265 1576 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 CCDC18Q5T9S5 1454 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 ARHGAP35Q9NRY4 1499 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 CREBBPQ92793 2442 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 DEFB135Q30KP9 77 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 LELP1Q5T871 98 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 WFDC13Q8IUB5 93 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 S100A13Q99584 98 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 KDM5DQ9BY66 1539 aa-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 SETD2Q9BYW2 2564 aaPredicted RBP-0.15□□□□□ -2.43
HMGB1P33-201ENST00000563485 DSPP15924 2871 aaKnown RBP-0.16□□□□□ -2.43
HMGB1P33-201ENST00000563485 ERVK-7P63135 1459 aa-0.16□□□□□ -2.43
HMGB1P33-201ENST00000563485 NCOA2Q15596 1464 aa-0.16□□□□□ -2.43
HMGB1P33-201ENST00000563485 PIK3C2BO00750 1634 aa-0.16□□□□□ -2.43
HMGB1P33-201ENST00000563485 DCAF1Q9Y4B6 1507 aa-0.16□□□□□ -2.43
HMGB1P33-201ENST00000563485 HEPN1Q6WQI6 88 aa-0.16□□□□□ -2.44
HMGB1P33-201ENST00000563485 PLXNC1O60486 1568 aa-0.16□□□□□ -2.44
HMGB1P33-201ENST00000563485 CFAP74Q9C0B2 1584 aa-0.16□□□□□ -2.44
HMGB1P33-201ENST00000563485 NF1P21359 2839 aa-0.16□□□□□ -2.44
HMGB1P33-201ENST00000563485 DOT1LQ8TEK3 1739 aa-0.16□□□□□ -2.44
HMGB1P33-201ENST00000563485 EPG5Q9HCE0 2579 aa-0.16□□□□□ -2.44
HMGB1P33-201ENST00000563485 NESP48681 1621 aa-0.16□□□□□ -2.44
HMGB1P33-201ENST00000563485 TNRC18O15417 2968 aaPredicted RBP-0.17□□□□□ -2.44
HMGB1P33-201ENST00000563485 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.17□□□□□ -2.44
HMGB1P33-201ENST00000563485 C3orf79P0CE67 100 aa-0.17□□□□□ -2.44
HMGB1P33-201ENST00000563485 ADIRFQ15847 76 aa-0.17□□□□□ -2.44
HMGB1P33-201ENST00000563485 SCN11AQ9UI33 1791 aa-0.17□□□□□ -2.44
HMGB1P33-201ENST00000563485 ARFGEF2Q9Y6D5 1785 aa-0.17□□□□□ -2.44
HMGB1P33-201ENST00000563485 DNAH9Q9NYC9 4486 aa-0.17□□□□□ -2.44
HMGB1P33-201ENST00000563485 DNAH6Q9C0G6 4158 aa-0.17□□□□□ -2.44
HMGB1P33-201ENST00000563485 SVEP1Q4LDE5 3571 aa-0.17□□□□□ -2.44
HMGB1P33-201ENST00000563485 ZNF831Q5JPB2 1677 aa-0.18□□□□□ -2.44
HMGB1P33-201ENST00000563485 AKAP9Q99996 3911 aa-0.18□□□□□ -2.44
HMGB1P33-201ENST00000563485 MAP3K1Q13233 1512 aa-0.18□□□□□ -2.44
HMGB1P33-201ENST00000563485 DNAH3Q8TD57 4116 aa-0.18□□□□□ -2.44
HMGB1P33-201ENST00000563485 UMAD1C9J7I0 102 aa-0.18□□□□□ -2.44
HMGB1P33-201ENST00000563485 ZZEF1O43149 2961 aa-0.18□□□□□ -2.44
HMGB1P33-201ENST00000563485 NDUFA3O95167 84 aa-0.18□□□□□ -2.44
HMGB1P33-201ENST00000563485 WFDC9Q8NEX5 89 aa-0.18□□□□□ -2.44
HMGB1P33-201ENST00000563485 DEPDC5O75140 1603 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms