RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 MRAPQ8TCY5 172 aa16.27■□□□□ 0.2
SHF-207ENST00000560540 Q6ZRU5 148 aa16.25■□□□□ 0.19
SHF-207ENST00000560540 LINC00528Q8N1L1 170 aa16.25■□□□□ 0.19
SHF-207ENST00000560540 C15orf56Q8N910 161 aa16.23■□□□□ 0.19
SHF-207ENST00000560540 OXTP01178 125 aa16.23■□□□□ 0.19
SHF-207ENST00000560540 C5orf47Q569G3 176 aa16.22■□□□□ 0.19
SHF-207ENST00000560540 HUWE1Q7Z6Z7 4374 aaKnown RBP16.21■□□□□ 0.19
SHF-207ENST00000560540 FBN3Q75N90 2809 aa16.21■□□□□ 0.19
SHF-207ENST00000560540 KLKP1Q107X0 134 aa16.2■□□□□ 0.18
SHF-207ENST00000560540 TRAV10A0A0B4J240 114 aa16.2■□□□□ 0.18
SHF-207ENST00000560540 F8WDY8 70 aa16.2■□□□□ 0.18
SHF-207ENST00000560540 FAM236DA0A1B0GTK5 79 aa16.17■□□□□ 0.18
SHF-207ENST00000560540 FAM236CP0DP71 79 aa16.17■□□□□ 0.18
SHF-207ENST00000560540 DNAH9Q9NYC9 4486 aa16.17■□□□□ 0.18
SHF-207ENST00000560540 H7BZZ5 65 aa16.17■□□□□ 0.18
SHF-207ENST00000560540 TM2D3Q9BRN9 247 aa16.16■□□□□ 0.18
SHF-207ENST00000560540 PRKDCP78527 4128 aaKnown RBP16.15■□□□□ 0.18
SHF-207ENST00000560540 COL7A1Q02388 2944 aa16.15■□□□□ 0.18
SHF-207ENST00000560540 C1orf43Q9BWL3 253 aa16.14■□□□□ 0.17
SHF-207ENST00000560540 Q6ZRP5 223 aa16.12■□□□□ 0.17
SHF-207ENST00000560540 Q6ZTC4 211 aa16.11■□□□□ 0.17
SHF-207ENST00000560540 SCXQ7RTU7 201 aa16.1■□□□□ 0.17
SHF-207ENST00000560540 LINC01556Q5JQF7 62 aa16.1■□□□□ 0.17
SHF-207ENST00000560540 ESRGQ1W209 222 aa16.09■□□□□ 0.17
SHF-207ENST00000560540 KCNQ1DNQ9H478 68 aa16.08■□□□□ 0.16
SHF-207ENST00000560540 EPM2AB3EWF7 344 aa16.07■□□□□ 0.16
SHF-207ENST00000560540 SYCNQ0VAF6 134 aa16.07■□□□□ 0.16
SHF-207ENST00000560540 SERP1Q9Y6X1 66 aa16.06■□□□□ 0.16
SHF-207ENST00000560540 STAB2Q8WWQ8 2551 aa16.06■□□□□ 0.16
SHF-207ENST00000560540 Q5XG85 94 aa16.06■□□□□ 0.16
SHF-207ENST00000560540 B9D2Q9BPU9 175 aa16.06■□□□□ 0.16
SHF-207ENST00000560540 IGKV2D-24A0A075B6R9 120 aa16.04■□□□□ 0.16
SHF-207ENST00000560540 NDUFC1O43677 76 aa16.04■□□□□ 0.16
SHF-207ENST00000560540 NKAPP1Q8N9T2 125 aa16.04■□□□□ 0.16
SHF-207ENST00000560540 RMI2Q96E14 147 aa16.03■□□□□ 0.16
SHF-207ENST00000560540 SNURFQ9Y675 71 aa16.03■□□□□ 0.16
SHF-207ENST00000560540 NREPQ16612 68 aa16.01■□□□□ 0.15
SHF-207ENST00000560540 BPY2O14599 106 aa16■□□□□ 0.15
SHF-207ENST00000560540 ERC2-IT1O76042 136 aa16■□□□□ 0.15
SHF-207ENST00000560540 IGKV4-1P06312 121 aa15.99■□□□□ 0.15
SHF-207ENST00000560540 TLX1NBP0CAT3 122 aa15.99■□□□□ 0.15
SHF-207ENST00000560540 C7orf33Q8WU49 177 aa15.99■□□□□ 0.15
SHF-207ENST00000560540 PLA2G2DQ9UNK4 145 aa15.99■□□□□ 0.15
SHF-207ENST00000560540 IGLV5-48A0A075B6I7 105 aa15.98■□□□□ 0.15
SHF-207ENST00000560540 F8WEM9 126 aa15.98■□□□□ 0.15
SHF-207ENST00000560540 SERTAD4-AS1Q5TG53 156 aa15.98■□□□□ 0.15
SHF-207ENST00000560540 Q8N377 158 aa15.97■□□□□ 0.15
SHF-207ENST00000560540 C11orf45Q8TAV5 145 aa15.96■□□□□ 0.15
SHF-207ENST00000560540 DHRS4-AS1Q9P1J3 65 aa15.96■□□□□ 0.15
SHF-207ENST00000560540 A0A1B0GW54 56 aa15.95■□□□□ 0.14
SHF-207ENST00000560540 TGP01266 2768 aa15.95■□□□□ 0.14
SHF-207ENST00000560540 DEFB131BA0A096LNP1 70 aa15.95■□□□□ 0.14
SHF-207ENST00000560540 DNAH10OSP0CZ25 163 aa15.95■□□□□ 0.14
SHF-207ENST00000560540 C4orf26Q17RF5 130 aa15.95■□□□□ 0.14
SHF-207ENST00000560540 ATP5EP56381 51 aaPredicted RBP15.94■□□□□ 0.14
SHF-207ENST00000560540 IGLV5-37A0A075B6J1 123 aa15.92■□□□□ 0.14
SHF-207ENST00000560540 PRYO14603 147 aa15.92■□□□□ 0.14
SHF-207ENST00000560540 Q6ZRX8 168 aa15.92■□□□□ 0.14
SHF-207ENST00000560540 Q8N9L7 120 aa15.92■□□□□ 0.14
SHF-207ENST00000560540 DEFB105AQ8NG35 78 aa15.91■□□□□ 0.14
SHF-207ENST00000560540 TMEM254Q8TBM7 123 aa15.91■□□□□ 0.14
SHF-207ENST00000560540 KRTAP4-16G5E9R7 235 aaPredicted RBP15.9■□□□□ 0.14
SHF-207ENST00000560540 C3orf84H3BNL1 204 aa15.9■□□□□ 0.14
SHF-207ENST00000560540 OCR1Q9BZK8 76 aa15.89■□□□□ 0.13
SHF-207ENST00000560540 SPRR1AP35321 89 aa15.88■□□□□ 0.13
SHF-207ENST00000560540 FUSP35637 526 aaKnown RBP eCLIP15.87■□□□□ 0.13
SHF-207ENST00000560540 HRCT1Q6UXD1 115 aa15.87■□□□□ 0.13
SHF-207ENST00000560540 IGLV1-50A0A075B6I6 118 aa15.86■□□□□ 0.13
SHF-207ENST00000560540 TNP2Q05952 138 aa15.85■□□□□ 0.13
SHF-207ENST00000560540 Q9BRP9 147 aa15.85■□□□□ 0.13
SHF-207ENST00000560540 ETDCA0A1B0GVM5 59 aa15.83■□□□□ 0.12
SHF-207ENST00000560540 A0A0U1RQV1 116 aa15.81■□□□□ 0.12
SHF-207ENST00000560540 A0A1W2PNM2 257 aa15.81■□□□□ 0.12
SHF-207ENST00000560540 SMIM26A0A096LP01 95 aa15.8■□□□□ 0.12
SHF-207ENST00000560540 RPL37AP8A6NKH3 93 aa15.8■□□□□ 0.12
SHF-207ENST00000560540 C1orf137Q5JT78 98 aa15.79■□□□□ 0.12
SHF-207ENST00000560540 FAM168BA1KXE4 195 aa15.79■□□□□ 0.12
SHF-207ENST00000560540 Q8NBF4 154 aa15.79■□□□□ 0.12
SHF-207ENST00000560540 SPRR4Q96PI1 79 aa15.77■□□□□ 0.11
SHF-207ENST00000560540 CSMD3Q7Z407 3707 aa15.77■□□□□ 0.11
SHF-207ENST00000560540 KRTAP7-1Q8IUC3 87 aa15.75■□□□□ 0.11
SHF-207ENST00000560540 DNAH7Q8WXX0 4024 aa15.74■□□□□ 0.11
SHF-207ENST00000560540 ST20-AS1Q8NBB2 130 aa15.74■□□□□ 0.11
SHF-207ENST00000560540 LINC00588Q9Y4M8 146 aa15.74■□□□□ 0.11
SHF-207ENST00000560540 MRPL55Q7Z7F7 128 aaKnown RBP15.73■□□□□ 0.11
SHF-207ENST00000560540 CASC10Q5T4H9 136 aa15.72■□□□□ 0.11
SHF-207ENST00000560540 FP248Q71RG6 208 aaPredicted RBP15.71■□□□□ 0.11
SHF-207ENST00000560540 SMIM29Q86T20 159 aa15.7■□□□□ 0.1
SHF-207ENST00000560540 LCE6AA0A183 80 aa15.67■□□□□ 0.1
SHF-207ENST00000560540 DYNC2H1Q8NCM8 4307 aaKnown RBP15.67■□□□□ 0.1
SHF-207ENST00000560540 UBE2BP63146 152 aa15.66■□□□□ 0.1
SHF-207ENST00000560540 HIGD2AQ9BW72 106 aa15.64■□□□□ 0.09
SHF-207ENST00000560540 REG3GQ6UW15 175 aa15.64■□□□□ 0.09
SHF-207ENST00000560540 LYSTQ99698 3801 aa15.64■□□□□ 0.09
SHF-207ENST00000560540 DSCR10P59022 87 aa15.63■□□□□ 0.09
SHF-207ENST00000560540 TENM2Q9NT68 2774 aa15.63■□□□□ 0.09
SHF-207ENST00000560540 STARD9Q9P2P6 4700 aa15.62■□□□□ 0.09
SHF-207ENST00000560540 FAM30AQ9NZY2 134 aa15.61■□□□□ 0.09
SHF-207ENST00000560540 PLECQ15149 4684 aaKnown RBP15.6■□□□□ 0.09
SHF-207ENST00000560540 LINC00476Q8WZB0 136 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms