RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 OR13C6PQ8NH95 151 aa5.14□□□□□ -1.59
USP3-217ENST00000560070 TMA7Q9Y2S6 64 aaKnown RBP5.14□□□□□ -1.59
USP3-217ENST00000560070 PKHD1L1Q86WI1 4243 aa5.13□□□□□ -1.59
USP3-217ENST00000560070 LRP1Q07954 4544 aaKnown RBP5.13□□□□□ -1.59
USP3-217ENST00000560070 TIMM17BO60830 172 aa5.13□□□□□ -1.59
USP3-217ENST00000560070 AKR1D1P51857 326 aa5.13□□□□□ -1.59
USP3-217ENST00000560070 HIGD2AQ9BW72 106 aa5.13□□□□□ -1.59
USP3-217ENST00000560070 ETDCA0A1B0GVM5 59 aa5.12□□□□□ -1.59
USP3-217ENST00000560070 KRTAP1-4P0C5Y4 121 aa5.12□□□□□ -1.59
USP3-217ENST00000560070 KRTAP13-1Q8IUC0 172 aa5.12□□□□□ -1.59
USP3-217ENST00000560070 MUSTN1Q8IVN3 82 aa5.12□□□□□ -1.59
USP3-217ENST00000560070 KCNQ1DNQ9H478 68 aa5.12□□□□□ -1.59
USP3-217ENST00000560070 SPANXB1Q9NS25 103 aaPredicted RBP5.12□□□□□ -1.59
USP3-217ENST00000560070 TRBV10-2A0A0K0K1G8 114 aa5.11□□□□□ -1.59
USP3-217ENST00000560070 PRYO14603 147 aa5.11□□□□□ -1.59
USP3-217ENST00000560070 NDUFC2O95298 119 aa5.11□□□□□ -1.59
USP3-217ENST00000560070 S100A12P80511 92 aa5.11□□□□□ -1.59
USP3-217ENST00000560070 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
USP3-217ENST00000560070 SMCR5Q8TEV8 140 aa5.1□□□□□ -1.59
USP3-217ENST00000560070 SPANXDQ9BXN6 97 aa5.1□□□□□ -1.59
USP3-217ENST00000560070 SPANXCQ9NY87 97 aa5.1□□□□□ -1.59
USP3-217ENST00000560070 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
USP3-217ENST00000560070 IGLV6-57P01721 117 aa5.09□□□□□ -1.59
USP3-217ENST00000560070 PPDPFQ9H3Y8 114 aa5.09□□□□□ -1.59
USP3-217ENST00000560070 HERC1Q15751 4861 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 TRAV23DV6A0A075B6W5 121 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 A0A087X002 238 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 A6NDN8 102 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 B5MCH6 92 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 CRYGAP11844 174 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 SPRR1AP35321 89 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 LINC00337Q8N6G1 96 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 TYMSOSQ8TAI1 123 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 C14orf144Q96I85 54 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 PAM16Q9Y3D7 125 aa5.08□□□□□ -1.6
USP3-217ENST00000560070 DMBT1Q9UGM3 2413 aaPredicted RBP5.08□□□□□ -1.6
USP3-217ENST00000560070 KRTAP4-16G5E9R7 235 aaPredicted RBP5.07□□□□□ -1.6
USP3-217ENST00000560070 ERC2-IT1O76042 136 aa5.07□□□□□ -1.6
USP3-217ENST00000560070 TSPAN13O95857 204 aa5.07□□□□□ -1.6
USP3-217ENST00000560070 IFITM1P13164 125 aa5.07□□□□□ -1.6
USP3-217ENST00000560070 LINC00518Q8N0U6 118 aa5.07□□□□□ -1.6
USP3-217ENST00000560070 ZNF73O43830 326 aaPredicted RBP5.06□□□□□ -1.6
USP3-217ENST00000560070 HINT1P49773 126 aaPredicted RBP5.06□□□□□ -1.6
USP3-217ENST00000560070 JOSD1Q15040 202 aaPredicted RBP5.06□□□□□ -1.6
USP3-217ENST00000560070 KRTAP13-2Q52LG2 175 aa5.06□□□□□ -1.6
USP3-217ENST00000560070 SPATA45Q537H7 98 aa5.06□□□□□ -1.6
USP3-217ENST00000560070 COPS9Q8WXC6 57 aa5.06□□□□□ -1.6
USP3-217ENST00000560070 COX8AP10176 69 aa5.05□□□□□ -1.6
USP3-217ENST00000560070 RPL13AP40429 203 aaKnown RBP5.05□□□□□ -1.6
USP3-217ENST00000560070 GAGE2AQ6NT46 116 aa5.05□□□□□ -1.6
USP3-217ENST00000560070 Q6ZVH6 145 aa5.05□□□□□ -1.6
USP3-217ENST00000560070 C3orf22Q8N5N4 141 aa5.05□□□□□ -1.6
USP3-217ENST00000560070 SPRR4Q96PI1 79 aa5.05□□□□□ -1.6
USP3-217ENST00000560070 HIST1H4GQ99525 98 aa5.05□□□□□ -1.6
USP3-217ENST00000560070 Q9BRP9 147 aa5.05□□□□□ -1.6
USP3-217ENST00000560070 VAMP8Q9BV40 100 aa5.05□□□□□ -1.6
USP3-217ENST00000560070 A4D1N5 150 aa5.03□□□□□ -1.6
USP3-217ENST00000560070 COX7BP24311 80 aa5.03□□□□□ -1.6
USP3-217ENST00000560070 C6orf99Q4VX62 202 aa5.03□□□□□ -1.6
USP3-217ENST00000560070 Q6ZRX8 168 aa5.03□□□□□ -1.6
USP3-217ENST00000560070 ST20-AS1Q8NBB2 130 aa5.03□□□□□ -1.6
USP3-217ENST00000560070 C12orf57Q99622 126 aa5.03□□□□□ -1.6
USP3-217ENST00000560070 CBY1Q9Y3M2 126 aa5.03□□□□□ -1.6
USP3-217ENST00000560070 ZNF706Q9Y5V0 76 aaPredicted RBP5.03□□□□□ -1.6
USP3-217ENST00000560070 FAM229BQ4G0N7 80 aa5.02□□□□□ -1.61
USP3-217ENST00000560070 PYY3Q5JQD4 70 aa5.02□□□□□ -1.61
USP3-217ENST00000560070 SLC25A34Q6PIV7 304 aa5.02□□□□□ -1.61
USP3-217ENST00000560070 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
USP3-217ENST00000560070 TNXBP22105 4242 aa5.01□□□□□ -1.61
USP3-217ENST00000560070 IGLV9-49A0A0B4J1Y8 123 aa5.01□□□□□ -1.61
USP3-217ENST00000560070 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
USP3-217ENST00000560070 DEFB105AQ8NG35 78 aa5.01□□□□□ -1.61
USP3-217ENST00000560070 SMIM11BQ8TCY0 68 aa5.01□□□□□ -1.61
USP3-217ENST00000560070 DLEU1O43261 78 aa5□□□□□ -1.61
USP3-217ENST00000560070 H7C2G1 150 aa4.99□□□□□ -1.61
USP3-217ENST00000560070 PRR4Q16378 134 aa4.99□□□□□ -1.61
USP3-217ENST00000560070 LINC00304Q8N9R0 145 aa4.99□□□□□ -1.61
USP3-217ENST00000560070 DHRS4-AS1Q9P1J3 65 aa4.99□□□□□ -1.61
USP3-217ENST00000560070 ELOF1P60002 83 aaKnown RBP4.98□□□□□ -1.61
USP3-217ENST00000560070 TAL2Q16559 108 aa4.98□□□□□ -1.61
USP3-217ENST00000560070 C2orf91Q6ZV80 131 aa4.98□□□□□ -1.61
USP3-217ENST00000560070 MOBPQ13875 183 aa4.97□□□□□ -1.61
USP3-217ENST00000560070 LINC00483Q53H64 154 aa4.97□□□□□ -1.61
USP3-217ENST00000560070 Q8NBF4 154 aa4.97□□□□□ -1.61
USP3-217ENST00000560070 A0A1B0GWB2 263 aa4.96□□□□□ -1.62
USP3-217ENST00000560070 CFC1BP0CG36 223 aa4.96□□□□□ -1.62
USP3-217ENST00000560070 CFC1P0CG37 223 aa4.96□□□□□ -1.62
USP3-217ENST00000560070 VAMP3Q15836 100 aa4.96□□□□□ -1.62
USP3-217ENST00000560070 C9orf153Q5TBE3 101 aa4.96□□□□□ -1.62
USP3-217ENST00000560070 RAB37Q96AX2 223 aa4.96□□□□□ -1.62
USP3-217ENST00000560070 RETNLBQ9BQ08 111 aa4.96□□□□□ -1.62
USP3-217ENST00000560070 HIGD1BQ9P298 99 aa4.96□□□□□ -1.62
USP3-217ENST00000560070 TRBV7-6A0A0J9YX20 115 aa4.95□□□□□ -1.62
USP3-217ENST00000560070 CEND1Q8N111 149 aa4.95□□□□□ -1.62
USP3-217ENST00000560070 Q1RN00 199 aa4.94□□□□□ -1.62
USP3-217ENST00000560070 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
USP3-217ENST00000560070 HRCT1Q6UXD1 115 aa4.94□□□□□ -1.62
USP3-217ENST00000560070 SSBP3-AS1Q7Z2R9 100 aa4.94□□□□□ -1.62
USP3-217ENST00000560070 PRO1933Q9H354 126 aa4.94□□□□□ -1.62
USP3-217ENST00000560070 SLC25A20O43772 301 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms