RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 A0A1B0GWB2 263 aa5.82□□□□□ -1.48
HERC1-206ENST00000559996 M0QXV9 152 aa5.82□□□□□ -1.48
HERC1-206ENST00000559996 IGLV6-57P01721 117 aa5.82□□□□□ -1.48
HERC1-206ENST00000559996 MRPL55Q7Z7F7 128 aaKnown RBP5.82□□□□□ -1.48
HERC1-206ENST00000559996 CDK2AP2O75956 126 aa5.81□□□□□ -1.48
HERC1-206ENST00000559996 HINT1P49773 126 aaPredicted RBP5.81□□□□□ -1.48
HERC1-206ENST00000559996 COPS9Q8WXC6 57 aa5.81□□□□□ -1.48
HERC1-206ENST00000559996 TRBV10-3A0A0K0K1G6 114 aa5.8□□□□□ -1.48
HERC1-206ENST00000559996 GAGE10A6NGK3 116 aa5.8□□□□□ -1.48
HERC1-206ENST00000559996 RPL37AP8A6NKH3 93 aa5.8□□□□□ -1.48
HERC1-206ENST00000559996 KRTAP10-4P60372 401 aaPredicted RBP5.8□□□□□ -1.48
HERC1-206ENST00000559996 KCNQ1DNQ9H478 68 aa5.8□□□□□ -1.48
HERC1-206ENST00000559996 HSPG2P98160 4391 aa5.8□□□□□ -1.48
HERC1-206ENST00000559996 RYR1P21817 5038 aa5.8□□□□□ -1.48
HERC1-206ENST00000559996 A0A0B4J2C4 111 aa5.79□□□□□ -1.48
HERC1-206ENST00000559996 KRTAP4-16G5E9R7 235 aaPredicted RBP5.79□□□□□ -1.48
HERC1-206ENST00000559996 NKAPP1Q8N9T2 125 aa5.79□□□□□ -1.48
HERC1-206ENST00000559996 VPS13BQ7Z7G8 4022 aa5.78□□□□□ -1.48
HERC1-206ENST00000559996 SMR3BP02814 79 aaPredicted RBP5.78□□□□□ -1.48
HERC1-206ENST00000559996 SPRR1AP35321 89 aa5.78□□□□□ -1.48
HERC1-206ENST00000559996 LBHQ53QV2 105 aaPredicted RBP5.78□□□□□ -1.48
HERC1-206ENST00000559996 KIAA1109Q2LD37 5005 aa5.78□□□□□ -1.48
HERC1-206ENST00000559996 PCP4L1A6NKN8 68 aa5.77□□□□□ -1.49
HERC1-206ENST00000559996 K7ERJ3 54 aa5.77□□□□□ -1.49
HERC1-206ENST00000559996 SNHG12Q9BXW3 62 aa5.77□□□□□ -1.49
HERC1-206ENST00000559996 TMEM126AQ9H061 195 aa5.77□□□□□ -1.49
HERC1-206ENST00000559996 NHP2Q9NX24 153 aaKnown RBP5.77□□□□□ -1.49
HERC1-206ENST00000559996 PSORS1C2Q9UIG4 136 aa5.77□□□□□ -1.49
HERC1-206ENST00000559996 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
HERC1-206ENST00000559996 TRAV13-2A0A0B4J235 113 aa5.76□□□□□ -1.49
HERC1-206ENST00000559996 A6NDN8 102 aa5.75□□□□□ -1.49
HERC1-206ENST00000559996 M0R143 59 aa5.75□□□□□ -1.49
HERC1-206ENST00000559996 S100A7L2Q5SY68 101 aa5.75□□□□□ -1.49
HERC1-206ENST00000559996 KRTAP13-1Q8IUC0 172 aa5.75□□□□□ -1.49
HERC1-206ENST00000559996 OR13C6PQ8NH95 151 aa5.75□□□□□ -1.49
HERC1-206ENST00000559996 SMIM11BQ8TCY0 68 aa5.75□□□□□ -1.49
HERC1-206ENST00000559996 PRO1854Q9UHT4 67 aa5.75□□□□□ -1.49
HERC1-206ENST00000559996 FAT1Q14517 4588 aa5.75□□□□□ -1.49
HERC1-206ENST00000559996 PRYO14603 147 aa5.74□□□□□ -1.49
HERC1-206ENST00000559996 RPL13AP40429 203 aaKnown RBP5.74□□□□□ -1.49
HERC1-206ENST00000559996 RPL28P46779 137 aaKnown RBP5.74□□□□□ -1.49
HERC1-206ENST00000559996 UBE2BP63146 152 aa5.74□□□□□ -1.49
HERC1-206ENST00000559996 REG3GQ6UW15 175 aa5.74□□□□□ -1.49
HERC1-206ENST00000559996 TRAV23DV6A0A075B6W5 121 aa5.73□□□□□ -1.49
HERC1-206ENST00000559996 RAB37Q96AX2 223 aa5.73□□□□□ -1.49
HERC1-206ENST00000559996 B5MCH6 92 aa5.72□□□□□ -1.49
HERC1-206ENST00000559996 TAX1BP3O14907 124 aa5.72□□□□□ -1.49
HERC1-206ENST00000559996 ZNF73O43830 326 aaPredicted RBP5.72□□□□□ -1.49
HERC1-206ENST00000559996 TSPAN13O95857 204 aa5.72□□□□□ -1.49
HERC1-206ENST00000559996 BCE1O60756 84 aa5.71□□□□□ -1.5
HERC1-206ENST00000559996 BATFQ16520 125 aa5.71□□□□□ -1.5
HERC1-206ENST00000559996 C6orf99Q4VX62 202 aa5.71□□□□□ -1.5
HERC1-206ENST00000559996 C1orf137Q5JT78 98 aa5.71□□□□□ -1.5
HERC1-206ENST00000559996 H7C2G1 150 aa5.7□□□□□ -1.5
HERC1-206ENST00000559996 IGLV7-43P04211 117 aa5.7□□□□□ -1.5
HERC1-206ENST00000559996 RPL37AP61513 92 aaKnown RBP5.7□□□□□ -1.5
HERC1-206ENST00000559996 Q8N1X5 172 aa5.7□□□□□ -1.5
HERC1-206ENST00000559996 Q9BRP9 147 aa5.7□□□□□ -1.5
HERC1-206ENST00000559996 TRBV7-6A0A0J9YX20 115 aa5.69□□□□□ -1.5
HERC1-206ENST00000559996 H0Y9J4 135 aa5.69□□□□□ -1.5
HERC1-206ENST00000559996 TRIAP1O43715 76 aa5.69□□□□□ -1.5
HERC1-206ENST00000559996 ELOF1P60002 83 aaKnown RBP5.69□□□□□ -1.5
HERC1-206ENST00000559996 SMCR5Q8TEV8 140 aa5.69□□□□□ -1.5
HERC1-206ENST00000559996 ZNF861PO60384 105 aa5.68□□□□□ -1.5
HERC1-206ENST00000559996 ERC2-IT1O76042 136 aa5.68□□□□□ -1.5
HERC1-206ENST00000559996 PRLHP81277 87 aa5.68□□□□□ -1.5
HERC1-206ENST00000559996 Q5VSD8 79 aa5.68□□□□□ -1.5
HERC1-206ENST00000559996 Q6ZRX8 168 aa5.68□□□□□ -1.5
HERC1-206ENST00000559996 FAM19A1Q7Z5A9 133 aa5.68□□□□□ -1.5
HERC1-206ENST00000559996 DIRC1Q969H9 104 aa5.68□□□□□ -1.5
HERC1-206ENST00000559996 FAM218AQ96MZ4 157 aa5.68□□□□□ -1.5
HERC1-206ENST00000559996 NAA38Q9BRA0 125 aaKnown RBP5.68□□□□□ -1.5
HERC1-206ENST00000559996 CBY1Q9Y3M2 126 aa5.67□□□□□ -1.5
HERC1-206ENST00000559996 SRRM2Q9UQ35 2752 aaKnown RBP5.67□□□□□ -1.5
HERC1-206ENST00000559996 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
HERC1-206ENST00000559996 ETDCA0A1B0GVM5 59 aa5.66□□□□□ -1.5
HERC1-206ENST00000559996 C9orf118A6NHY6 69 aa5.66□□□□□ -1.5
HERC1-206ENST00000559996 COX7BP24311 80 aa5.66□□□□□ -1.5
HERC1-206ENST00000559996 LINC00575Q6W349 94 aa5.66□□□□□ -1.5
HERC1-206ENST00000559996 HERC2O95714 4834 aa5.65□□□□□ -1.5
HERC1-206ENST00000559996 INAFM2P0DMQ5 153 aa5.65□□□□□ -1.5
HERC1-206ENST00000559996 COL5A1-AS1Q5SY13 56 aa5.65□□□□□ -1.5
HERC1-206ENST00000559996 H0YGX0 51 aa5.64□□□□□ -1.51
HERC1-206ENST00000559996 H3BUT2 72 aa5.64□□□□□ -1.51
HERC1-206ENST00000559996 UBE2AP49459 152 aa5.64□□□□□ -1.51
HERC1-206ENST00000559996 LINC01547P58512 204 aaPredicted RBP5.64□□□□□ -1.51
HERC1-206ENST00000559996 Q1RN00 199 aa5.64□□□□□ -1.51
HERC1-206ENST00000559996 CLEC2BQ92478 149 aa5.64□□□□□ -1.51
HERC1-206ENST00000559996 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
HERC1-206ENST00000559996 SPINK6Q6UWN8 80 aa5.63□□□□□ -1.51
HERC1-206ENST00000559996 KRTAP1-4P0C5Y4 121 aa5.62□□□□□ -1.51
HERC1-206ENST00000559996 PSMB2P49721 201 aa5.62□□□□□ -1.51
HERC1-206ENST00000559996 VAMP3Q15836 100 aa5.62□□□□□ -1.51
HERC1-206ENST00000559996 ST20-AS1Q8NBB2 130 aa5.62□□□□□ -1.51
HERC1-206ENST00000559996 HIGD2AQ9BW72 106 aa5.62□□□□□ -1.51
HERC1-206ENST00000559996 DHRS4-AS1Q9P1J3 65 aa5.62□□□□□ -1.51
HERC1-206ENST00000559996 A0A1W2PPM0 123 aa5.61□□□□□ -1.51
HERC1-206ENST00000559996 hADV29S1A0JD25 119 aa5.61□□□□□ -1.51
HERC1-206ENST00000559996 TCL1BO95988 128 aa5.61□□□□□ -1.51
HERC1-206ENST00000559996 A0A1B0GX51 115 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms