RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 ZNF73O43830 326 aaPredicted RBP6.92□□□□□ -1.3
SPG11-219ENST00000559822 SLC25A20O43772 301 aa6.91□□□□□ -1.3
SPG11-219ENST00000559822 C9orf153Q5TBE3 101 aa6.91□□□□□ -1.3
SPG11-219ENST00000559822 COLCA2A8K830 154 aa6.9□□□□□ -1.3
SPG11-219ENST00000559822 NPC2P61916 151 aa6.9□□□□□ -1.3
SPG11-219ENST00000559822 ASB16-AS1Q495Z4 193 aa6.9□□□□□ -1.3
SPG11-219ENST00000559822 SOSTDC1Q6X4U4 206 aa6.9□□□□□ -1.3
SPG11-219ENST00000559822 Q8N377 158 aa6.9□□□□□ -1.3
SPG11-219ENST00000559822 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
SPG11-219ENST00000559822 ADAMTSL4-AS1Q5T5F5 129 aa6.89□□□□□ -1.31
SPG11-219ENST00000559822 SPANXCQ9NY87 97 aa6.89□□□□□ -1.31
SPG11-219ENST00000559822 SYS1-DBNDD2H3BUS1 97 aa6.88□□□□□ -1.31
SPG11-219ENST00000559822 TIMM17BO60830 172 aa6.88□□□□□ -1.31
SPG11-219ENST00000559822 SLC25A34Q6PIV7 304 aa6.88□□□□□ -1.31
SPG11-219ENST00000559822 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
SPG11-219ENST00000559822 OR13C6PQ8NH95 151 aa6.87□□□□□ -1.31
SPG11-219ENST00000559822 FAT4Q6V0I7 4981 aa6.86□□□□□ -1.31
SPG11-219ENST00000559822 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
SPG11-219ENST00000559822 SLC7A5P1Q8MH63 180 aa6.86□□□□□ -1.31
SPG11-219ENST00000559822 LINC00308Q8TCZ7 52 aa6.86□□□□□ -1.31
SPG11-219ENST00000559822 DHRS4-AS1Q9P1J3 65 aa6.86□□□□□ -1.31
SPG11-219ENST00000559822 LINC01545Q5VT33 79 aa6.85□□□□□ -1.31
SPG11-219ENST00000559822 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
SPG11-219ENST00000559822 ST20-AS1Q8NBB2 130 aa6.85□□□□□ -1.31
SPG11-219ENST00000559822 SPANXDQ9BXN6 97 aa6.85□□□□□ -1.31
SPG11-219ENST00000559822 ZNF815PA8K554 130 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST1H2BKO60814 126 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST1H2BJP06899 126 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 SPRR1BP22528 89 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST1H2BOP23527 126 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST1H2BBP33778 126 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST1H2BDP58876 126 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST1H2BCP62807 126 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST2H2BEQ16778 126 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.84□□□□□ -1.31
SPG11-219ENST00000559822 LINC00518Q8N0U6 118 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST1H2BHQ93079 126 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 LITAFQ99732 161 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST1H2BNQ99877 126 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 HIST1H2BMQ99879 126 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 LIMD2Q9BT23 127 aa6.84□□□□□ -1.31
SPG11-219ENST00000559822 LAMTOR3Q9UHA4 124 aa6.83□□□□□ -1.32
SPG11-219ENST00000559822 LINC01547P58512 204 aaPredicted RBP6.82□□□□□ -1.32
SPG11-219ENST00000559822 COPS9Q8WXC6 57 aa6.82□□□□□ -1.32
SPG11-219ENST00000559822 COX7BP24311 80 aa6.81□□□□□ -1.32
SPG11-219ENST00000559822 ELOF1P60002 83 aaKnown RBP6.81□□□□□ -1.32
SPG11-219ENST00000559822 XP32Q5T750 250 aa6.81□□□□□ -1.32
SPG11-219ENST00000559822 C6orf99Q4VX62 202 aa6.79□□□□□ -1.32
SPG11-219ENST00000559822 SCGB1D4Q6XE38 83 aa6.79□□□□□ -1.32
SPG11-219ENST00000559822 TRBV7-6A0A0J9YX20 115 aa6.78□□□□□ -1.32
SPG11-219ENST00000559822 C20orf202A1L168 122 aa6.78□□□□□ -1.32
SPG11-219ENST00000559822 C3orf79P0CE67 100 aa6.78□□□□□ -1.32
SPG11-219ENST00000559822 TAL2Q16559 108 aa6.78□□□□□ -1.32
SPG11-219ENST00000559822 CD164Q04900 197 aa6.77□□□□□ -1.33
SPG11-219ENST00000559822 TEX49A0A1B0GTD5 131 aa6.76□□□□□ -1.33
SPG11-219ENST00000559822 IFITM1P13164 125 aa6.76□□□□□ -1.33
SPG11-219ENST00000559822 AKR1D1P51857 326 aa6.76□□□□□ -1.33
SPG11-219ENST00000559822 KRTDAPP60985 99 aa6.76□□□□□ -1.33
SPG11-219ENST00000559822 HRCT1Q6UXD1 115 aa6.76□□□□□ -1.33
SPG11-219ENST00000559822 Q6ZVH6 145 aa6.76□□□□□ -1.33
SPG11-219ENST00000559822 TTTY13Q9BZ97 58 aa6.76□□□□□ -1.33
SPG11-219ENST00000559822 PRO1933Q9H354 126 aa6.76□□□□□ -1.33
SPG11-219ENST00000559822 A0A1B0GWB2 263 aa6.75□□□□□ -1.33
SPG11-219ENST00000559822 COA6Q5JTJ3 125 aaKnown RBP6.75□□□□□ -1.33
SPG11-219ENST00000559822 DEFB105AQ8NG35 78 aa6.75□□□□□ -1.33
SPG11-219ENST00000559822 KRTAP4-1Q9BYQ7 146 aa6.75□□□□□ -1.33
SPG11-219ENST00000559822 Q1RN00 199 aa6.74□□□□□ -1.33
SPG11-219ENST00000559822 A4D1N5 150 aa6.73□□□□□ -1.33
SPG11-219ENST00000559822 A6NDN8 102 aa6.73□□□□□ -1.33
SPG11-219ENST00000559822 H7C2G1 150 aa6.73□□□□□ -1.33
SPG11-219ENST00000559822 NHP2Q9NX24 153 aaKnown RBP6.72□□□□□ -1.33
SPG11-219ENST00000559822 ANKRD39Q53RE8 183 aa6.71□□□□□ -1.34
SPG11-219ENST00000559822 Q5XG85 94 aa6.71□□□□□ -1.34
SPG11-219ENST00000559822 IGLV5-48A0A075B6I7 105 aa6.7□□□□□ -1.34
SPG11-219ENST00000559822 TRAV13-2A0A0B4J235 113 aa6.7□□□□□ -1.34
SPG11-219ENST00000559822 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
SPG11-219ENST00000559822 KRTAP9-6A0A140TA67 174 aa6.69□□□□□ -1.34
SPG11-219ENST00000559822 SNRPEP62304 92 aaKnown RBP6.69□□□□□ -1.34
SPG11-219ENST00000559822 MUSTN1Q8IVN3 82 aa6.69□□□□□ -1.34
SPG11-219ENST00000559822 PCOTHQ58A44 107 aa6.68□□□□□ -1.34
SPG11-219ENST00000559822 SMIM29Q86T20 159 aa6.68□□□□□ -1.34
SPG11-219ENST00000559822 ATOH7Q8N100 152 aa6.68□□□□□ -1.34
SPG11-219ENST00000559822 IGLV8-61A0A075B6I0 122 aa6.67□□□□□ -1.34
SPG11-219ENST00000559822 PCP2Q8IVA1 136 aa6.67□□□□□ -1.34
SPG11-219ENST00000559822 F8WEM9 126 aa6.66□□□□□ -1.34
SPG11-219ENST00000559822 VAMP3Q15836 100 aa6.66□□□□□ -1.34
SPG11-219ENST00000559822 TCL1BO95988 128 aa6.65□□□□□ -1.34
SPG11-219ENST00000559822 C1orf195Q5TG92 126 aa6.65□□□□□ -1.34
SPG11-219ENST00000559822 SMIM11BQ8TCY0 68 aa6.65□□□□□ -1.34
SPG11-219ENST00000559822 HSBP1L1C9JCN9 74 aa6.63□□□□□ -1.35
SPG11-219ENST00000559822 LCE2DQ5TA82 110 aaPredicted RBP6.62□□□□□ -1.35
SPG11-219ENST00000559822 S100A2P29034 98 aa6.61□□□□□ -1.35
SPG11-219ENST00000559822 LCE2CQ5TA81 110 aa6.61□□□□□ -1.35
SPG11-219ENST00000559822 A0A0G2JQZ4 141 aa6.6□□□□□ -1.35
SPG11-219ENST00000559822 CFC1BP0CG36 223 aa6.6□□□□□ -1.35
SPG11-219ENST00000559822 Q6JHZ5 121 aa6.6□□□□□ -1.35
SPG11-219ENST00000559822 LINC00575Q6W349 94 aa6.6□□□□□ -1.35
SPG11-219ENST00000559822 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
SPG11-219ENST00000559822 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
SPG11-219ENST00000559822 hADV29S1A0JD25 119 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms