RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SCGB1D1O95968 90 aa6.39□□□□□ -1.39
SPG11-216ENST00000559347 DDTP30046 118 aa6.39□□□□□ -1.39
SPG11-216ENST00000559347 NPC2P61916 151 aa6.39□□□□□ -1.39
SPG11-216ENST00000559347 ADAMTSL4-AS1Q5T5F5 129 aa6.39□□□□□ -1.39
SPG11-216ENST00000559347 SPRR4Q96PI1 79 aa6.39□□□□□ -1.39
SPG11-216ENST00000559347 S100A12P80511 92 aa6.38□□□□□ -1.39
SPG11-216ENST00000559347 C3orf22Q8N5N4 141 aa6.38□□□□□ -1.39
SPG11-216ENST00000559347 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
SPG11-216ENST00000559347 LITAFQ99732 161 aa6.38□□□□□ -1.39
SPG11-216ENST00000559347 ZNF706Q9Y5V0 76 aaPredicted RBP6.38□□□□□ -1.39
SPG11-216ENST00000559347 IGLV6-57P01721 117 aa6.37□□□□□ -1.39
SPG11-216ENST00000559347 KRTDAPP60985 99 aa6.37□□□□□ -1.39
SPG11-216ENST00000559347 PRR4Q16378 134 aa6.37□□□□□ -1.39
SPG11-216ENST00000559347 SMCR5Q8TEV8 140 aa6.37□□□□□ -1.39
SPG11-216ENST00000559347 ZNF815PA8K554 130 aa6.36□□□□□ -1.39
SPG11-216ENST00000559347 B5MCH6 92 aa6.36□□□□□ -1.39
SPG11-216ENST00000559347 TIMM17BO60830 172 aa6.36□□□□□ -1.39
SPG11-216ENST00000559347 S100A7L2Q5SY68 101 aa6.36□□□□□ -1.39
SPG11-216ENST00000559347 TTTY13Q9BZ97 58 aa6.36□□□□□ -1.39
SPG11-216ENST00000559347 TRAV23DV6A0A075B6W5 121 aa6.35□□□□□ -1.39
SPG11-216ENST00000559347 Q6ZRX8 168 aa6.35□□□□□ -1.39
SPG11-216ENST00000559347 SPANXCQ9NY87 97 aa6.35□□□□□ -1.39
SPG11-216ENST00000559347 C20orf202A1L168 122 aa6.34□□□□□ -1.39
SPG11-216ENST00000559347 S100A6P06703 90 aa6.34□□□□□ -1.39
SPG11-216ENST00000559347 LINC00308Q8TCZ7 52 aa6.34□□□□□ -1.39
SPG11-216ENST00000559347 Q9BRP9 147 aa6.34□□□□□ -1.39
SPG11-216ENST00000559347 LINC00483Q53H64 154 aa6.33□□□□□ -1.4
SPG11-216ENST00000559347 ZNF73O43830 326 aaPredicted RBP6.32□□□□□ -1.4
SPG11-216ENST00000559347 ERC2-IT1O76042 136 aa6.32□□□□□ -1.4
SPG11-216ENST00000559347 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
SPG11-216ENST00000559347 PPDPFQ9H3Y8 114 aa6.32□□□□□ -1.4
SPG11-216ENST00000559347 ATOH7Q8N100 152 aa6.31□□□□□ -1.4
SPG11-216ENST00000559347 S100A1P23297 94 aa6.3□□□□□ -1.4
SPG11-216ENST00000559347 HIST3H2BBQ8N257 126 aa6.3□□□□□ -1.4
SPG11-216ENST00000559347 SPANXDQ9BXN6 97 aa6.3□□□□□ -1.4
SPG11-216ENST00000559347 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
SPG11-216ENST00000559347 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
SPG11-216ENST00000559347 AKR1D1P51857 326 aa6.29□□□□□ -1.4
SPG11-216ENST00000559347 JOSD1Q15040 202 aaPredicted RBP6.29□□□□□ -1.4
SPG11-216ENST00000559347 GAGE2AQ6NT46 116 aa6.29□□□□□ -1.4
SPG11-216ENST00000559347 SCGB1D4Q6XE38 83 aa6.29□□□□□ -1.4
SPG11-216ENST00000559347 CBY1Q9Y3M2 126 aa6.29□□□□□ -1.4
SPG11-216ENST00000559347 SPAG11AQ6PDA7 123 aa6.28□□□□□ -1.4
SPG11-216ENST00000559347 Q8NBF4 154 aa6.28□□□□□ -1.4
SPG11-216ENST00000559347 OR13C6PQ8NH95 151 aa6.28□□□□□ -1.4
SPG11-216ENST00000559347 HIST1H2BLQ99880 126 aa6.28□□□□□ -1.4
SPG11-216ENST00000559347 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
SPG11-216ENST00000559347 MOBPQ13875 183 aa6.27□□□□□ -1.41
SPG11-216ENST00000559347 PCP2Q8IVA1 136 aa6.27□□□□□ -1.41
SPG11-216ENST00000559347 MUC2Q02817 5179 aa6.26□□□□□ -1.41
SPG11-216ENST00000559347 IGLV9-49A0A0B4J1Y8 123 aa6.26□□□□□ -1.41
SPG11-216ENST00000559347 S100A2P29034 98 aa6.26□□□□□ -1.41
SPG11-216ENST00000559347 LINC00518Q8N0U6 118 aa6.26□□□□□ -1.41
SPG11-216ENST00000559347 IFITM1P13164 125 aa6.25□□□□□ -1.41
SPG11-216ENST00000559347 HINT1P49773 126 aaPredicted RBP6.25□□□□□ -1.41
SPG11-216ENST00000559347 SNRPEP62304 92 aaKnown RBP6.25□□□□□ -1.41
SPG11-216ENST00000559347 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
SPG11-216ENST00000559347 C5orf52A6NGY3 159 aa6.24□□□□□ -1.41
SPG11-216ENST00000559347 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
SPG11-216ENST00000559347 Q6ZVH6 145 aa6.24□□□□□ -1.41
SPG11-216ENST00000559347 ST20-AS1Q8NBB2 130 aa6.24□□□□□ -1.41
SPG11-216ENST00000559347 COPS9Q8WXC6 57 aa6.24□□□□□ -1.41
SPG11-216ENST00000559347 MUC17Q685J3 4493 aa6.23□□□□□ -1.41
SPG11-216ENST00000559347 IGLV7-46A0A075B6I9 117 aa6.23□□□□□ -1.41
SPG11-216ENST00000559347 A4D1N5 150 aa6.23□□□□□ -1.41
SPG11-216ENST00000559347 SPINK1P00995 79 aa6.23□□□□□ -1.41
SPG11-216ENST00000559347 C6orf99Q4VX62 202 aa6.23□□□□□ -1.41
SPG11-216ENST00000559347 DHRS4-AS1Q9P1J3 65 aa6.23□□□□□ -1.41
SPG11-216ENST00000559347 COX7BP24311 80 aa6.22□□□□□ -1.41
SPG11-216ENST00000559347 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
SPG11-216ENST00000559347 SSBP3-AS1Q7Z2R9 100 aa6.22□□□□□ -1.41
SPG11-216ENST00000559347 MUSTN1Q8IVN3 82 aa6.22□□□□□ -1.41
SPG11-216ENST00000559347 SPRR1BP22528 89 aa6.21□□□□□ -1.42
SPG11-216ENST00000559347 C9orf153Q5TBE3 101 aa6.21□□□□□ -1.42
SPG11-216ENST00000559347 FP248Q71RG6 208 aaPredicted RBP6.21□□□□□ -1.42
SPG11-216ENST00000559347 TRBV7-6A0A0J9YX20 115 aa6.2□□□□□ -1.42
SPG11-216ENST00000559347 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
SPG11-216ENST00000559347 A6NDN8 102 aa6.19□□□□□ -1.42
SPG11-216ENST00000559347 HSBP1L1C9JCN9 74 aa6.19□□□□□ -1.42
SPG11-216ENST00000559347 Q8N377 158 aa6.19□□□□□ -1.42
SPG11-216ENST00000559347 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
SPG11-216ENST00000559347 A0A1B0GWB2 263 aa6.18□□□□□ -1.42
SPG11-216ENST00000559347 TRAV13-2A0A0B4J235 113 aa6.17□□□□□ -1.42
SPG11-216ENST00000559347 SLC25A34Q6PIV7 304 aa6.17□□□□□ -1.42
SPG11-216ENST00000559347 KRTAP13-3Q3SY46 172 aa6.16□□□□□ -1.42
SPG11-216ENST00000559347 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
SPG11-216ENST00000559347 IGLV5-48A0A075B6I7 105 aa6.14□□□□□ -1.43
SPG11-216ENST00000559347 H3BS24 57 aa6.14□□□□□ -1.43
SPG11-216ENST00000559347 SLC25A20O43772 301 aa6.14□□□□□ -1.43
SPG11-216ENST00000559347 LINC01547P58512 204 aaPredicted RBP6.14□□□□□ -1.43
SPG11-216ENST00000559347 Q1RN00 199 aa6.14□□□□□ -1.43
SPG11-216ENST00000559347 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
SPG11-216ENST00000559347 LAMTOR3Q9UHA4 124 aa6.14□□□□□ -1.43
SPG11-216ENST00000559347 TEX49A0A1B0GTD5 131 aa6.13□□□□□ -1.43
SPG11-216ENST00000559347 TAL2Q16559 108 aa6.13□□□□□ -1.43
SPG11-216ENST00000559347 DEFB105AQ8NG35 78 aa6.13□□□□□ -1.43
SPG11-216ENST00000559347 COX8AP10176 69 aa6.12□□□□□ -1.43
SPG11-216ENST00000559347 SMIM29Q86T20 159 aa6.12□□□□□ -1.43
SPG11-216ENST00000559347 NHP2Q9NX24 153 aaKnown RBP6.12□□□□□ -1.43
SPG11-216ENST00000559347 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms