RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 IGLV8-61A0A075B6I0 122 aa3.29□□□□□ -1.88
ZEB1-211ENST00000558440 ETDCA0A1B0GVM5 59 aa3.29□□□□□ -1.88
ZEB1-211ENST00000558440 LINC01549A6NIU2 74 aa3.29□□□□□ -1.88
ZEB1-211ENST00000558440 ADCYAP1P18509 176 aa3.29□□□□□ -1.88
ZEB1-211ENST00000558440 MOBPQ13875 183 aa3.29□□□□□ -1.88
ZEB1-211ENST00000558440 PMVKQ15126 192 aa3.29□□□□□ -1.88
ZEB1-211ENST00000558440 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
ZEB1-211ENST00000558440 Q8NDZ9 215 aa3.29□□□□□ -1.88
ZEB1-211ENST00000558440 SMCR5Q8TEV8 140 aa3.29□□□□□ -1.88
ZEB1-211ENST00000558440 ZNF625Q96I27 306 aaPredicted RBP3.29□□□□□ -1.88
ZEB1-211ENST00000558440 USH2AO75445 5202 aa3.29□□□□□ -1.88
ZEB1-211ENST00000558440 LINC00483Q53H64 154 aa3.28□□□□□ -1.88
ZEB1-211ENST00000558440 PCOTHQ58A44 107 aa3.28□□□□□ -1.88
ZEB1-211ENST00000558440 SFTA2Q6UW10 78 aa3.28□□□□□ -1.88
ZEB1-211ENST00000558440 SSBP3-AS1Q7Z2R9 100 aa3.28□□□□□ -1.88
ZEB1-211ENST00000558440 MT-ND4LP03901 98 aa3.27□□□□□ -1.89
ZEB1-211ENST00000558440 LINC00158P58513 81 aa3.27□□□□□ -1.89
ZEB1-211ENST00000558440 S100A12P80511 92 aa3.27□□□□□ -1.89
ZEB1-211ENST00000558440 A8MU10 97 aa3.26□□□□□ -1.89
ZEB1-211ENST00000558440 NCR3O14931 201 aa3.26□□□□□ -1.89
ZEB1-211ENST00000558440 ATP6V1G1O75348 118 aa3.26□□□□□ -1.89
ZEB1-211ENST00000558440 IGLC3P0DOY3 106 aa3.26□□□□□ -1.89
ZEB1-211ENST00000558440 ZNF22P17026 224 aaPredicted RBP3.26□□□□□ -1.89
ZEB1-211ENST00000558440 NDUFA6P56556 154 aa3.26□□□□□ -1.89
ZEB1-211ENST00000558440 C9orf153Q5TBE3 101 aa3.26□□□□□ -1.89
ZEB1-211ENST00000558440 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
ZEB1-211ENST00000558440 KCNQ1DNQ9H478 68 aa3.26□□□□□ -1.89
ZEB1-211ENST00000558440 A0A0U1RRA0 63 aa3.25□□□□□ -1.89
ZEB1-211ENST00000558440 SPRR1AP35321 89 aa3.25□□□□□ -1.89
ZEB1-211ENST00000558440 FA2HQ7L5A8 372 aa3.25□□□□□ -1.89
ZEB1-211ENST00000558440 BOD1L2Q8IYS8 172 aa3.25□□□□□ -1.89
ZEB1-211ENST00000558440 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
ZEB1-211ENST00000558440 C9orf92A6NGG3 77 aa3.24□□□□□ -1.89
ZEB1-211ENST00000558440 LINC01546A6NGU7 62 aa3.24□□□□□ -1.89
ZEB1-211ENST00000558440 KRTAP4-16G5E9R7 235 aaPredicted RBP3.24□□□□□ -1.89
ZEB1-211ENST00000558440 SCGB1D1O95968 90 aa3.24□□□□□ -1.89
ZEB1-211ENST00000558440 TMEM170BQ5T4T1 132 aa3.24□□□□□ -1.89
ZEB1-211ENST00000558440 TRAV9-1A0A075B6T8 112 aa3.23□□□□□ -1.89
ZEB1-211ENST00000558440 TRBV10-3A0A0K0K1G6 114 aa3.23□□□□□ -1.89
ZEB1-211ENST00000558440 ERC2-IT1O76042 136 aa3.23□□□□□ -1.89
ZEB1-211ENST00000558440 SMIM13P0DJ93 91 aa3.23□□□□□ -1.89
ZEB1-211ENST00000558440 MEIG1Q5JSS6 88 aa3.23□□□□□ -1.89
ZEB1-211ENST00000558440 LIMD2Q9BT23 127 aa3.23□□□□□ -1.89
ZEB1-211ENST00000558440 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
ZEB1-211ENST00000558440 C11orf86A6NJI1 115 aa3.22□□□□□ -1.89
ZEB1-211ENST00000558440 IGLV6-57P01721 117 aa3.21□□□□□ -1.9
ZEB1-211ENST00000558440 DDTP30046 118 aa3.21□□□□□ -1.9
ZEB1-211ENST00000558440 JOSD1Q15040 202 aaPredicted RBP3.21□□□□□ -1.9
ZEB1-211ENST00000558440 Q6ZRX8 168 aa3.21□□□□□ -1.9
ZEB1-211ENST00000558440 BAGE3Q86Y29 109 aa3.21□□□□□ -1.9
ZEB1-211ENST00000558440 MIR7-3HGQ8N6C7 128 aa3.21□□□□□ -1.9
ZEB1-211ENST00000558440 Q9BRP9 147 aa3.21□□□□□ -1.9
ZEB1-211ENST00000558440 LINC00587B1AMM8 73 aa3.2□□□□□ -1.9
ZEB1-211ENST00000558440 HBDP02042 147 aa3.2□□□□□ -1.9
ZEB1-211ENST00000558440 HRCT1Q6UXD1 115 aa3.2□□□□□ -1.9
ZEB1-211ENST00000558440 MAP1LC3CQ9BXW4 147 aa3.2□□□□□ -1.9
ZEB1-211ENST00000558440 TMEM223A0PJW6 202 aa3.19□□□□□ -1.9
ZEB1-211ENST00000558440 HERV-K104P63124 156 aa3.19□□□□□ -1.9
ZEB1-211ENST00000558440 FABP9Q0Z7S8 132 aa3.19□□□□□ -1.9
ZEB1-211ENST00000558440 S100A7L2Q5SY68 101 aa3.19□□□□□ -1.9
ZEB1-211ENST00000558440 CHTOPQ9Y3Y2 248 aaKnown RBP3.19□□□□□ -1.9
ZEB1-211ENST00000558440 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
ZEB1-211ENST00000558440 A0A096LNJ9 63 aa3.18□□□□□ -1.9
ZEB1-211ENST00000558440 TRBV10-2A0A0K0K1G8 114 aa3.18□□□□□ -1.9
ZEB1-211ENST00000558440 S100PP25815 95 aa3.18□□□□□ -1.9
ZEB1-211ENST00000558440 PMCHL1Q16048 86 aa3.18□□□□□ -1.9
ZEB1-211ENST00000558440 COX19Q49B96 90 aa3.18□□□□□ -1.9
ZEB1-211ENST00000558440 SLC25A34Q6PIV7 304 aa3.18□□□□□ -1.9
ZEB1-211ENST00000558440 ST20-AS1Q8NBB2 130 aa3.18□□□□□ -1.9
ZEB1-211ENST00000558440 TRAV23DV6A0A075B6W5 121 aa3.17□□□□□ -1.9
ZEB1-211ENST00000558440 MYMXA0A1B0GTQ4 84 aa3.17□□□□□ -1.9
ZEB1-211ENST00000558440 C5orf52A6NGY3 159 aa3.17□□□□□ -1.9
ZEB1-211ENST00000558440 LINC00614P0C842 121 aa3.17□□□□□ -1.9
ZEB1-211ENST00000558440 RPL37P61927 97 aaKnown RBP3.17□□□□□ -1.9
ZEB1-211ENST00000558440 Q6Q795 121 aa3.17□□□□□ -1.9
ZEB1-211ENST00000558440 MIEN1Q9BRT3 115 aa3.17□□□□□ -1.9
ZEB1-211ENST00000558440 SEC11CQ9BY50 192 aa3.17□□□□□ -1.9
ZEB1-211ENST00000558440 SPANXB1Q9NS25 103 aaPredicted RBP3.17□□□□□ -1.9
ZEB1-211ENST00000558440 ZNF73O43830 326 aaPredicted RBP3.16□□□□□ -1.9
ZEB1-211ENST00000558440 HINT1P49773 126 aaPredicted RBP3.16□□□□□ -1.9
ZEB1-211ENST00000558440 COMMD7Q86VX2 200 aa3.16□□□□□ -1.9
ZEB1-211ENST00000558440 LAMTOR3Q9UHA4 124 aa3.16□□□□□ -1.9
ZEB1-211ENST00000558440 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
ZEB1-211ENST00000558440 TRAV12-1A0A0B4J245 112 aa3.15□□□□□ -1.91
ZEB1-211ENST00000558440 LOC107984156A0A0G2JMH3 177 aa3.15□□□□□ -1.91
ZEB1-211ENST00000558440 H7C2G1 150 aa3.15□□□□□ -1.91
ZEB1-211ENST00000558440 CD164Q04900 197 aa3.15□□□□□ -1.91
ZEB1-211ENST00000558440 ARL17AQ8IVW1 177 aa3.15□□□□□ -1.91
ZEB1-211ENST00000558440 C18orf32Q8TCD1 76 aa3.15□□□□□ -1.91
ZEB1-211ENST00000558440 CBY1Q9Y3M2 126 aa3.15□□□□□ -1.91
ZEB1-211ENST00000558440 NDUFC2O95298 119 aa3.14□□□□□ -1.91
ZEB1-211ENST00000558440 SPRR1BP22528 89 aa3.14□□□□□ -1.91
ZEB1-211ENST00000558440 IFITM2Q01629 132 aa3.14□□□□□ -1.91
ZEB1-211ENST00000558440 PRO1933Q9H354 126 aa3.14□□□□□ -1.91
ZEB1-211ENST00000558440 DHRS4-AS1Q9P1J3 65 aa3.14□□□□□ -1.91
ZEB1-211ENST00000558440 C1orf195Q5TG92 126 aa3.13□□□□□ -1.91
ZEB1-211ENST00000558440 IFI27L1Q96BM0 104 aa3.13□□□□□ -1.91
ZEB1-211ENST00000558440 TRAPPC1Q9Y5R8 145 aa3.13□□□□□ -1.91
ZEB1-211ENST00000558440 LEPROTO15243 131 aa3.12□□□□□ -1.91
ZEB1-211ENST00000558440 TSPEAR-AS2P59090 65 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms