RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 Q6ZTC4 211 aa7.49□□□□□ -1.21
SRP54-213ENST00000556994 SERP1Q9Y6X1 66 aa7.49□□□□□ -1.21
SRP54-213ENST00000556994 ANK2Q01484 3957 aa7.48□□□□□ -1.21
SRP54-213ENST00000556994 NREPQ16612 68 aa7.47□□□□□ -1.21
SRP54-213ENST00000556994 ESRGQ1W209 222 aa7.47□□□□□ -1.21
SRP54-213ENST00000556994 IGKV2D-24A0A075B6R9 120 aa7.47□□□□□ -1.21
SRP54-213ENST00000556994 TENM3Q9P273 2699 aa7.46□□□□□ -1.21
SRP54-213ENST00000556994 SERTAD4-AS1Q5TG53 156 aa7.46□□□□□ -1.22
SRP54-213ENST00000556994 C1orf43Q9BWL3 253 aa7.46□□□□□ -1.22
SRP54-213ENST00000556994 EPM2AB3EWF7 344 aa7.45□□□□□ -1.22
SRP54-213ENST00000556994 IGKV4-1P06312 121 aa7.45□□□□□ -1.22
SRP54-213ENST00000556994 Q8N377 158 aa7.44□□□□□ -1.22
SRP54-213ENST00000556994 NKAPP1Q8N9T2 125 aa7.44□□□□□ -1.22
SRP54-213ENST00000556994 RPL37AP8A6NKH3 93 aa7.44□□□□□ -1.22
SRP54-213ENST00000556994 SYCNQ0VAF6 134 aa7.44□□□□□ -1.22
SRP54-213ENST00000556994 OXLD1Q5BKU9 147 aa7.44□□□□□ -1.22
SRP54-213ENST00000556994 TMEM254Q8TBM7 123 aa7.44□□□□□ -1.22
SRP54-213ENST00000556994 C7orf33Q8WU49 177 aa7.43□□□□□ -1.22
SRP54-213ENST00000556994 LINC00474Q9P2X8 69 aa7.42□□□□□ -1.22
SRP54-213ENST00000556994 FP248Q71RG6 208 aaPredicted RBP7.41□□□□□ -1.22
SRP54-213ENST00000556994 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
SRP54-213ENST00000556994 FAM168BA1KXE4 195 aa7.41□□□□□ -1.22
SRP54-213ENST00000556994 H3BNG1 76 aa7.4□□□□□ -1.23
SRP54-213ENST00000556994 NDUFC1O43677 76 aa7.4□□□□□ -1.23
SRP54-213ENST00000556994 OCR1Q9BZK8 76 aa7.4□□□□□ -1.23
SRP54-213ENST00000556994 WIPF1O43516 503 aa7.39□□□□□ -1.23
SRP54-213ENST00000556994 KRTAP10-11P60412 298 aa7.39□□□□□ -1.23
SRP54-213ENST00000556994 ST20-AS1Q8NBB2 130 aa7.39□□□□□ -1.23
SRP54-213ENST00000556994 Q9BRP9 147 aa7.39□□□□□ -1.23
SRP54-213ENST00000556994 LINC00336Q6ZUF6 198 aa7.38□□□□□ -1.23
SRP54-213ENST00000556994 HIGD2AQ9BW72 106 aa7.38□□□□□ -1.23
SRP54-213ENST00000556994 IGLV5-48A0A075B6I7 105 aa7.38□□□□□ -1.23
SRP54-213ENST00000556994 SMIM26A0A096LP01 95 aa7.38□□□□□ -1.23
SRP54-213ENST00000556994 LINC01556Q5JQF7 62 aa7.38□□□□□ -1.23
SRP54-213ENST00000556994 F8P00451 2351 aa7.37□□□□□ -1.23
SRP54-213ENST00000556994 DEFB131BA0A096LNP1 70 aa7.37□□□□□ -1.23
SRP54-213ENST00000556994 A0A1W2PNM2 257 aa7.37□□□□□ -1.23
SRP54-213ENST00000556994 CASC10Q5T4H9 136 aa7.37□□□□□ -1.23
SRP54-213ENST00000556994 FAM30AQ9NZY2 134 aa7.37□□□□□ -1.23
SRP54-213ENST00000556994 SMIM29Q86T20 159 aa7.36□□□□□ -1.23
SRP54-213ENST00000556994 PRYO14603 147 aa7.36□□□□□ -1.23
SRP54-213ENST00000556994 FAM229BQ4G0N7 80 aa7.36□□□□□ -1.23
SRP54-213ENST00000556994 Q6ZRX8 168 aa7.36□□□□□ -1.23
SRP54-213ENST00000556994 A0A0U1RQV1 116 aa7.35□□□□□ -1.23
SRP54-213ENST00000556994 ERC2-IT1O76042 136 aa7.35□□□□□ -1.23
SRP54-213ENST00000556994 FUSP35637 526 aaKnown RBP eCLIP7.35□□□□□ -1.23
SRP54-213ENST00000556994 C1orf137Q5JT78 98 aa7.35□□□□□ -1.23
SRP54-213ENST00000556994 ETDCA0A1B0GVM5 59 aa7.34□□□□□ -1.23
SRP54-213ENST00000556994 KRTAP4-16G5E9R7 235 aaPredicted RBP7.34□□□□□ -1.23
SRP54-213ENST00000556994 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
SRP54-213ENST00000556994 DHRS4-AS1Q9P1J3 65 aa7.34□□□□□ -1.23
SRP54-213ENST00000556994 IGLV1-50A0A075B6I6 118 aa7.33□□□□□ -1.24
SRP54-213ENST00000556994 C11orf45Q8TAV5 145 aa7.33□□□□□ -1.24
SRP54-213ENST00000556994 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
SRP54-213ENST00000556994 MAST4O15021 2626 aa7.32□□□□□ -1.24
SRP54-213ENST00000556994 A0A0G2JQZ4 141 aa7.32□□□□□ -1.24
SRP54-213ENST00000556994 A0A1W2PNN7 141 aa7.32□□□□□ -1.24
SRP54-213ENST00000556994 ATP5EP56381 51 aaPredicted RBP7.32□□□□□ -1.24
SRP54-213ENST00000556994 F8WDY8 70 aa7.32□□□□□ -1.24
SRP54-213ENST00000556994 TNP2Q05952 138 aa7.31□□□□□ -1.24
SRP54-213ENST00000556994 FBN1P35555 2871 aaKnown RBP7.31□□□□□ -1.24
SRP54-213ENST00000556994 STAB1Q9NY15 2570 aa7.31□□□□□ -1.24
SRP54-213ENST00000556994 DNAH10OSP0CZ25 163 aa7.3□□□□□ -1.24
SRP54-213ENST00000556994 UBE2BP63146 152 aa7.3□□□□□ -1.24
SRP54-213ENST00000556994 Q8NBF4 154 aa7.3□□□□□ -1.24
SRP54-213ENST00000556994 TLX1NBP0CAT3 122 aa7.3□□□□□ -1.24
SRP54-213ENST00000556994 NOTCH1P46531 2555 aa7.3□□□□□ -1.24
SRP54-213ENST00000556994 CMYA5Q8N3K9 4069 aa7.3□□□□□ -1.24
SRP54-213ENST00000556994 K7EQZ3 153 aa7.29□□□□□ -1.24
SRP54-213ENST00000556994 SPRR1AP35321 89 aa7.29□□□□□ -1.24
SRP54-213ENST00000556994 DSCR10P59022 87 aa7.29□□□□□ -1.24
SRP54-213ENST00000556994 MRAPQ8TCY5 172 aa7.29□□□□□ -1.24
SRP54-213ENST00000556994 PLA2G2DQ9UNK4 145 aa7.29□□□□□ -1.24
SRP54-213ENST00000556994 DEFB116Q30KQ4 102 aa7.28□□□□□ -1.24
SRP54-213ENST00000556994 MRPL55Q7Z7F7 128 aaKnown RBP7.28□□□□□ -1.24
SRP54-213ENST00000556994 LINC00588Q9Y4M8 146 aa7.28□□□□□ -1.24
SRP54-213ENST00000556994 PRO0628Q9UI54 55 aa7.28□□□□□ -1.24
SRP54-213ENST00000556994 DNAH1Q9P2D7 4330 aa7.27□□□□□ -1.25
SRP54-213ENST00000556994 LRCOL1A6NCL2 159 aa7.27□□□□□ -1.25
SRP54-213ENST00000556994 SPRR4Q96PI1 79 aa7.27□□□□□ -1.25
SRP54-213ENST00000556994 IGLV5-37A0A075B6J1 123 aa7.26□□□□□ -1.25
SRP54-213ENST00000556994 BRK1Q8WUW1 75 aa7.25□□□□□ -1.25
SRP54-213ENST00000556994 LINC00476Q8WZB0 136 aa7.25□□□□□ -1.25
SRP54-213ENST00000556994 LYSTQ99698 3801 aa7.25□□□□□ -1.25
SRP54-213ENST00000556994 A0A1B0GW54 56 aa7.24□□□□□ -1.25
SRP54-213ENST00000556994 SRRM2Q9UQ35 2752 aaKnown RBP7.24□□□□□ -1.25
SRP54-213ENST00000556994 PRB2P02812 416 aaPredicted RBP7.24□□□□□ -1.25
SRP54-213ENST00000556994 REG3GQ6UW15 175 aa7.24□□□□□ -1.25
SRP54-213ENST00000556994 DNAH10Q8IVF4 4471 aa7.24□□□□□ -1.25
SRP54-213ENST00000556994 CSMD3Q7Z407 3707 aa7.23□□□□□ -1.25
SRP54-213ENST00000556994 PRLHP81277 87 aa7.22□□□□□ -1.25
SRP54-213ENST00000556994 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.22□□□□□ -1.25
SRP54-213ENST00000556994 LCE6AA0A183 80 aa7.22□□□□□ -1.25
SRP54-213ENST00000556994 PSCAO43653 123 aa7.22□□□□□ -1.25
SRP54-213ENST00000556994 PRR4Q16378 134 aa7.22□□□□□ -1.25
SRP54-213ENST00000556994 IGFL1Q6UW32 110 aa7.22□□□□□ -1.25
SRP54-213ENST00000556994 PKIGQ9Y2B9 76 aa7.22□□□□□ -1.25
SRP54-213ENST00000556994 COL6A5A8TX70 2615 aa7.21□□□□□ -1.25
SRP54-213ENST00000556994 IGKV2-24A0A0C4DH68 120 aa7.21□□□□□ -1.26
SRP54-213ENST00000556994 HCG22E2RYF7 251 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms