RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 NDUFC2O95298 119 aa4.69□□□□□ -1.66
VTI1B-206ENST00000556461 ATOH7Q8N100 152 aa4.69□□□□□ -1.66
VTI1B-206ENST00000556461 LINC00304Q8N9R0 145 aa4.69□□□□□ -1.66
VTI1B-206ENST00000556461 LINC00308Q8TCZ7 52 aa4.69□□□□□ -1.66
VTI1B-206ENST00000556461 RETNLBQ9BQ08 111 aa4.69□□□□□ -1.66
VTI1B-206ENST00000556461 Q9BRP9 147 aa4.69□□□□□ -1.66
VTI1B-206ENST00000556461 MIEN1Q9BRT3 115 aa4.69□□□□□ -1.66
VTI1B-206ENST00000556461 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
VTI1B-206ENST00000556461 MUC2Q02817 5179 aa4.68□□□□□ -1.66
VTI1B-206ENST00000556461 TRAV23DV6A0A075B6W5 121 aa4.67□□□□□ -1.66
VTI1B-206ENST00000556461 TIMM17BO60830 172 aa4.67□□□□□ -1.66
VTI1B-206ENST00000556461 LINC00483Q53H64 154 aa4.67□□□□□ -1.66
VTI1B-206ENST00000556461 S100A7L2Q5SY68 101 aa4.67□□□□□ -1.66
VTI1B-206ENST00000556461 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
VTI1B-206ENST00000556461 GAGE2AQ6NT46 116 aa4.66□□□□□ -1.66
VTI1B-206ENST00000556461 Q6ZRX8 168 aa4.66□□□□□ -1.66
VTI1B-206ENST00000556461 PCP2Q8IVA1 136 aa4.66□□□□□ -1.66
VTI1B-206ENST00000556461 HIST3H2BBQ8N257 126 aa4.66□□□□□ -1.66
VTI1B-206ENST00000556461 SPANXCQ9NY87 97 aa4.66□□□□□ -1.66
VTI1B-206ENST00000556461 ZNF706Q9Y5V0 76 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-206ENST00000556461 C20orf202A1L168 122 aa4.65□□□□□ -1.67
VTI1B-206ENST00000556461 ZNF73O43830 326 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-206ENST00000556461 S100A12P80511 92 aa4.65□□□□□ -1.67
VTI1B-206ENST00000556461 HIST1H2BLQ99880 126 aa4.65□□□□□ -1.67
VTI1B-206ENST00000556461 S100A1P23297 94 aa4.64□□□□□ -1.67
VTI1B-206ENST00000556461 ST20-AS1Q8NBB2 130 aa4.64□□□□□ -1.67
VTI1B-206ENST00000556461 Q8NBF4 154 aa4.64□□□□□ -1.67
VTI1B-206ENST00000556461 OR13C6PQ8NH95 151 aa4.64□□□□□ -1.67
VTI1B-206ENST00000556461 SCGB1D4Q6XE38 83 aa4.63□□□□□ -1.67
VTI1B-206ENST00000556461 SPANXDQ9BXN6 97 aa4.63□□□□□ -1.67
VTI1B-206ENST00000556461 IGLV9-49A0A0B4J1Y8 123 aa4.62□□□□□ -1.67
VTI1B-206ENST00000556461 MOBPQ13875 183 aa4.62□□□□□ -1.67
VTI1B-206ENST00000556461 SPAG11AQ6PDA7 123 aa4.61□□□□□ -1.67
VTI1B-206ENST00000556461 MUSTN1Q8IVN3 82 aa4.61□□□□□ -1.67
VTI1B-206ENST00000556461 IGLV7-46A0A075B6I9 117 aa4.6□□□□□ -1.67
VTI1B-206ENST00000556461 S100A2P29034 98 aa4.6□□□□□ -1.67
VTI1B-206ENST00000556461 SNRPEP62304 92 aaKnown RBP4.6□□□□□ -1.67
VTI1B-206ENST00000556461 CTAG1AP78358 180 aa4.6□□□□□ -1.67
VTI1B-206ENST00000556461 JOSD1Q15040 202 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-206ENST00000556461 C6orf99Q4VX62 202 aa4.6□□□□□ -1.67
VTI1B-206ENST00000556461 IFITM1P13164 125 aa4.59□□□□□ -1.67
VTI1B-206ENST00000556461 COX7BP24311 80 aa4.59□□□□□ -1.67
VTI1B-206ENST00000556461 ELOF1P60002 83 aaKnown RBP4.59□□□□□ -1.67
VTI1B-206ENST00000556461 SSBP3-AS1Q7Z2R9 100 aa4.59□□□□□ -1.67
VTI1B-206ENST00000556461 LINC00518Q8N0U6 118 aa4.59□□□□□ -1.67
VTI1B-206ENST00000556461 S100A6P06703 90 aa4.58□□□□□ -1.68
VTI1B-206ENST00000556461 HINT1P49773 126 aaPredicted RBP4.58□□□□□ -1.68
VTI1B-206ENST00000556461 AKR1D1P51857 326 aa4.58□□□□□ -1.68
VTI1B-206ENST00000556461 TPRXLQ17RH7 258 aa4.58□□□□□ -1.68
VTI1B-206ENST00000556461 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
VTI1B-206ENST00000556461 C9orf153Q5TBE3 101 aa4.58□□□□□ -1.68
VTI1B-206ENST00000556461 Q6ZVH6 145 aa4.58□□□□□ -1.68
VTI1B-206ENST00000556461 CBY1Q9Y3M2 126 aa4.58□□□□□ -1.68
VTI1B-206ENST00000556461 FAT4Q6V0I7 4981 aa4.58□□□□□ -1.68
VTI1B-206ENST00000556461 A6NDN8 102 aa4.57□□□□□ -1.68
VTI1B-206ENST00000556461 SPINK1P00995 79 aa4.57□□□□□ -1.68
VTI1B-206ENST00000556461 SPRR1BP22528 89 aa4.57□□□□□ -1.68
VTI1B-206ENST00000556461 DHRS4-AS1Q9P1J3 65 aa4.57□□□□□ -1.68
VTI1B-206ENST00000556461 C5orf52A6NGY3 159 aa4.56□□□□□ -1.68
VTI1B-206ENST00000556461 Q8N377 158 aa4.56□□□□□ -1.68
VTI1B-206ENST00000556461 CDIP1Q9H305 208 aa4.56□□□□□ -1.68
VTI1B-206ENST00000556461 TRBV7-6A0A0J9YX20 115 aa4.55□□□□□ -1.68
VTI1B-206ENST00000556461 HSBP1L1C9JCN9 74 aa4.55□□□□□ -1.68
VTI1B-206ENST00000556461 SCGB1D1O95968 90 aa4.55□□□□□ -1.68
VTI1B-206ENST00000556461 LINC01547P58512 204 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-206ENST00000556461 KRTAP13-3Q3SY46 172 aa4.55□□□□□ -1.68
VTI1B-206ENST00000556461 FP248Q71RG6 208 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-206ENST00000556461 DEFB105AQ8NG35 78 aa4.55□□□□□ -1.68
VTI1B-206ENST00000556461 SMIM11BQ8TCY0 68 aa4.55□□□□□ -1.68
VTI1B-206ENST00000556461 COPS9Q8WXC6 57 aa4.55□□□□□ -1.68
VTI1B-206ENST00000556461 A0A1B0GWB2 263 aa4.54□□□□□ -1.68
VTI1B-206ENST00000556461 A4D1N5 150 aa4.54□□□□□ -1.68
VTI1B-206ENST00000556461 RPS29P62273 56 aaKnown RBP4.54□□□□□ -1.68
VTI1B-206ENST00000556461 Q1RN00 199 aa4.54□□□□□ -1.68
VTI1B-206ENST00000556461 SMIM29Q86T20 159 aa4.54□□□□□ -1.68
VTI1B-206ENST00000556461 TRAV13-2A0A0B4J235 113 aa4.53□□□□□ -1.68
VTI1B-206ENST00000556461 A0A0G2JQZ4 141 aa4.53□□□□□ -1.68
VTI1B-206ENST00000556461 TAL2Q16559 108 aa4.53□□□□□ -1.68
VTI1B-206ENST00000556461 HRCT1Q6UXD1 115 aa4.53□□□□□ -1.68
VTI1B-206ENST00000556461 LAMTOR3Q9UHA4 124 aa4.53□□□□□ -1.68
VTI1B-206ENST00000556461 IGLV5-48A0A075B6I7 105 aa4.52□□□□□ -1.69
VTI1B-206ENST00000556461 TEX49A0A1B0GTD5 131 aa4.52□□□□□ -1.69
VTI1B-206ENST00000556461 SLC25A20O43772 301 aa4.52□□□□□ -1.69
VTI1B-206ENST00000556461 COX8AP10176 69 aa4.52□□□□□ -1.69
VTI1B-206ENST00000556461 C12orf57Q99622 126 aa4.52□□□□□ -1.69
VTI1B-206ENST00000556461 C14orf144Q96I85 54 aa4.51□□□□□ -1.69
VTI1B-206ENST00000556461 SLC25A34Q6PIV7 304 aa4.5□□□□□ -1.69
VTI1B-206ENST00000556461 HIST1H4GQ99525 98 aa4.5□□□□□ -1.69
VTI1B-206ENST00000556461 PAM16Q9Y3D7 125 aa4.5□□□□□ -1.69
VTI1B-206ENST00000556461 H7C2G1 150 aa4.49□□□□□ -1.69
VTI1B-206ENST00000556461 DLEU1O43261 78 aa4.49□□□□□ -1.69
VTI1B-206ENST00000556461 LORP23490 312 aaPredicted RBP4.49□□□□□ -1.69
VTI1B-206ENST00000556461 SPATA45Q537H7 98 aa4.49□□□□□ -1.69
VTI1B-206ENST00000556461 LINC00575Q6W349 94 aa4.49□□□□□ -1.69
VTI1B-206ENST00000556461 C2orf91Q6ZV80 131 aa4.48□□□□□ -1.69
VTI1B-206ENST00000556461 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
VTI1B-206ENST00000556461 PRO1933Q9H354 126 aa4.48□□□□□ -1.69
VTI1B-206ENST00000556461 ASB16-AS1Q495Z4 193 aa4.47□□□□□ -1.69
VTI1B-206ENST00000556461 NHP2Q9NX24 153 aaKnown RBP4.47□□□□□ -1.69
VTI1B-206ENST00000556461 hADV29S1A0JD25 119 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms