RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 C9orf163Q8N9P6 203 aa7.16□□□□□ -1.26
ACTN1-216ENST00000556083 PRR15Q8IV56 129 aa7.14□□□□□ -1.27
ACTN1-216ENST00000556083 UQCR11O14957 56 aa7.13□□□□□ -1.27
ACTN1-216ENST00000556083 Q96NJ1 140 aa7.13□□□□□ -1.27
ACTN1-216ENST00000556083 PRRC2CQ9Y520 2896 aaKnown RBP7.13□□□□□ -1.27
ACTN1-216ENST00000556083 CNBPP62633 177 aaKnown RBP7.13□□□□□ -1.27
ACTN1-216ENST00000556083 LINC00304Q8N9R0 145 aa7.13□□□□□ -1.27
ACTN1-216ENST00000556083 A0A096LNT2 108 aa7.12□□□□□ -1.27
ACTN1-216ENST00000556083 J3QL48 77 aa7.12□□□□□ -1.27
ACTN1-216ENST00000556083 TM2D3Q9BRN9 247 aa7.12□□□□□ -1.27
ACTN1-216ENST00000556083 COL27A1Q8IZC6 1860 aaPredicted RBP7.12□□□□□ -1.27
ACTN1-216ENST00000556083 HECTD1Q9ULT8 2610 aa7.11□□□□□ -1.27
ACTN1-216ENST00000556083 CHD7Q9P2D1 2997 aa7.11□□□□□ -1.27
ACTN1-216ENST00000556083 C8orf17Q9NRJ1 99 aa7.11□□□□□ -1.27
ACTN1-216ENST00000556083 A0A1B0GVX0 72 aa7.11□□□□□ -1.27
ACTN1-216ENST00000556083 KLKP1Q107X0 134 aa7.11□□□□□ -1.27
ACTN1-216ENST00000556083 IGLV5-37A0A075B6J1 123 aa7.09□□□□□ -1.27
ACTN1-216ENST00000556083 K7EIL1 84 aa7.09□□□□□ -1.27
ACTN1-216ENST00000556083 PRUNE2Q8WUY3 3088 aa7.09□□□□□ -1.27
ACTN1-216ENST00000556083 A0A087WTM6 91 aa7.09□□□□□ -1.27
ACTN1-216ENST00000556083 CD164Q04900 197 aa7.08□□□□□ -1.28
ACTN1-216ENST00000556083 IGFL1Q6UW32 110 aa7.07□□□□□ -1.28
ACTN1-216ENST00000556083 C15orf56Q8N910 161 aa7.07□□□□□ -1.28
ACTN1-216ENST00000556083 Q9UF83 564 aa7.07□□□□□ -1.28
ACTN1-216ENST00000556083 SPANXA2-OT1Q8N9U9 137 aa7.07□□□□□ -1.28
ACTN1-216ENST00000556083 ZNF575Q86XF7 245 aa7.06□□□□□ -1.28
ACTN1-216ENST00000556083 MTORP42345 2549 aa7.06□□□□□ -1.28
ACTN1-216ENST00000556083 LINC01600Q96MT4 127 aa7.05□□□□□ -1.28
ACTN1-216ENST00000556083 CHD9Q3L8U1 2897 aa7.05□□□□□ -1.28
ACTN1-216ENST00000556083 K7EQZ3 153 aa7.05□□□□□ -1.28
ACTN1-216ENST00000556083 COA5Q86WW8 74 aa7.05□□□□□ -1.28
ACTN1-216ENST00000556083 CHTF8P0CG12 524 aa7.04□□□□□ -1.28
ACTN1-216ENST00000556083 RBM12B-AS1Q9P1G2 102 aa7.04□□□□□ -1.28
ACTN1-216ENST00000556083 IGLV7-43P04211 117 aa7.04□□□□□ -1.28
ACTN1-216ENST00000556083 H3BS24 57 aa7.03□□□□□ -1.28
ACTN1-216ENST00000556083 C4orf26Q17RF5 130 aa7.03□□□□□ -1.28
ACTN1-216ENST00000556083 Q8N377 158 aa7.02□□□□□ -1.29
ACTN1-216ENST00000556083 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
ACTN1-216ENST00000556083 GIG44P09565 113 aaPredicted RBP7.01□□□□□ -1.29
ACTN1-216ENST00000556083 ANKRD17O75179 2603 aaKnown RBP7.01□□□□□ -1.29
ACTN1-216ENST00000556083 SPRR4Q96PI1 79 aa7.01□□□□□ -1.29
ACTN1-216ENST00000556083 CRIPTQ9P021 101 aa7.01□□□□□ -1.29
ACTN1-216ENST00000556083 APLNQ9ULZ1 77 aa7□□□□□ -1.29
ACTN1-216ENST00000556083 KRTAP10-11P60412 298 aa7□□□□□ -1.29
ACTN1-216ENST00000556083 IGLV5-48A0A075B6I7 105 aa6.99□□□□□ -1.29
ACTN1-216ENST00000556083 WIPF1O43516 503 aa6.99□□□□□ -1.29
ACTN1-216ENST00000556083 C9orf129Q5T035 196 aaKnown RBP6.99□□□□□ -1.29
ACTN1-216ENST00000556083 A8MUN3 132 aa6.98□□□□□ -1.29
ACTN1-216ENST00000556083 PCSK5Q92824 1860 aa6.98□□□□□ -1.29
ACTN1-216ENST00000556083 C5orf42Q9H799 3197 aa6.98□□□□□ -1.29
ACTN1-216ENST00000556083 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
ACTN1-216ENST00000556083 FAM229BQ4G0N7 80 aa6.97□□□□□ -1.29
ACTN1-216ENST00000556083 HELZ2Q9BYK8 2649 aaKnown RBP6.97□□□□□ -1.29
ACTN1-216ENST00000556083 MIR22HGQ0VDD5 57 aa6.96□□□□□ -1.3
ACTN1-216ENST00000556083 LAMA2P24043 3122 aaKnown RBP6.95□□□□□ -1.3
ACTN1-216ENST00000556083 ZNF292O60281 2723 aa6.95□□□□□ -1.3
ACTN1-216ENST00000556083 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
ACTN1-216ENST00000556083 SZT2Q5T011 3432 aa6.94□□□□□ -1.3
ACTN1-216ENST00000556083 SPENQ96T58 3664 aaKnown RBP6.94□□□□□ -1.3
ACTN1-216ENST00000556083 DSCR10P59022 87 aa6.93□□□□□ -1.3
ACTN1-216ENST00000556083 FAM104AQ969W3 186 aa6.93□□□□□ -1.3
ACTN1-216ENST00000556083 TRANK1O15050 2925 aa6.93□□□□□ -1.3
ACTN1-216ENST00000556083 TNRC18O15417 2968 aaPredicted RBP6.91□□□□□ -1.3
ACTN1-216ENST00000556083 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
ACTN1-216ENST00000556083 OBSCN-AS1Q96MR7 158 aa6.91□□□□□ -1.3
ACTN1-216ENST00000556083 BAHCC1Q9P281 2608 aa6.9□□□□□ -1.31
ACTN1-216ENST00000556083 ACANP16112 2415 aa6.9□□□□□ -1.31
ACTN1-216ENST00000556083 USP24Q9UPU5 2620 aa6.89□□□□□ -1.31
ACTN1-216ENST00000556083 KRTAP1-3Q8IUG1 177 aa6.88□□□□□ -1.31
ACTN1-216ENST00000556083 A0A1W2PNM2 257 aa6.88□□□□□ -1.31
ACTN1-216ENST00000556083 H7BZZ5 65 aa6.88□□□□□ -1.31
ACTN1-216ENST00000556083 KRTAP10-3P60369 221 aa6.88□□□□□ -1.31
ACTN1-216ENST00000556083 COL6A3P12111 3177 aa6.88□□□□□ -1.31
ACTN1-216ENST00000556083 DMDP11532 3685 aa6.88□□□□□ -1.31
ACTN1-216ENST00000556083 CDC42SE1Q9NRR8 79 aa6.87□□□□□ -1.31
ACTN1-216ENST00000556083 A0A1W2PNN7 141 aa6.86□□□□□ -1.31
ACTN1-216ENST00000556083 KRTAP1-1Q07627 177 aa6.86□□□□□ -1.31
ACTN1-216ENST00000556083 CHD6Q8TD26 2715 aa6.84□□□□□ -1.31
ACTN1-216ENST00000556083 IGLV8-61A0A075B6I0 122 aa6.83□□□□□ -1.32
ACTN1-216ENST00000556083 CDH23Q9H251 3354 aa6.83□□□□□ -1.32
ACTN1-216ENST00000556083 CENPEQ02224 2701 aa6.83□□□□□ -1.32
ACTN1-216ENST00000556083 EIF4EBP3O60516 100 aaPredicted RBP6.82□□□□□ -1.32
ACTN1-216ENST00000556083 CFAP46Q8IYW2 2715 aa6.82□□□□□ -1.32
ACTN1-216ENST00000556083 UNC80Q8N2C7 3258 aa6.82□□□□□ -1.32
ACTN1-216ENST00000556083 MYO15AQ9UKN7 3530 aa6.81□□□□□ -1.32
ACTN1-216ENST00000556083 LCA10Q71F78 164 aa6.81□□□□□ -1.32
ACTN1-216ENST00000556083 SETXQ7Z333 2677 aaKnown RBP6.81□□□□□ -1.32
ACTN1-216ENST00000556083 TRIOO75962 3097 aa6.79□□□□□ -1.32
ACTN1-216ENST00000556083 SPRR1BP22528 89 aa6.79□□□□□ -1.32
ACTN1-216ENST00000556083 Q6ZSA8 131 aa6.79□□□□□ -1.32
ACTN1-216ENST00000556083 PLAC8Q9NZF1 115 aa6.79□□□□□ -1.32
ACTN1-216ENST00000556083 KTN1-AS1Q86SY8 53 aa6.79□□□□□ -1.32
ACTN1-216ENST00000556083 IGLV7-46A0A075B6I9 117 aa6.78□□□□□ -1.32
ACTN1-216ENST00000556083 C9orf92A6NGG3 77 aa6.78□□□□□ -1.32
ACTN1-216ENST00000556083 OCR1Q9BZK8 76 aa6.77□□□□□ -1.32
ACTN1-216ENST00000556083 DSPP15924 2871 aaKnown RBP6.77□□□□□ -1.33
ACTN1-216ENST00000556083 SPRR1AP35321 89 aa6.77□□□□□ -1.33
ACTN1-216ENST00000556083 Q1T7F1 81 aa6.77□□□□□ -1.33
ACTN1-216ENST00000556083 VCANP13611 3396 aa6.77□□□□□ -1.33
ACTN1-216ENST00000556083 CFAP54Q96N23 3096 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 292.4 ms