RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 A0A1W2PPM0 123 aa6.8□□□□□ -1.32
SHMT2-218ENST00000555213 H7C2G1 150 aa6.8□□□□□ -1.32
SHMT2-218ENST00000555213 NCR3O14931 201 aa6.8□□□□□ -1.32
SHMT2-218ENST00000555213 IGLV6-57P01721 117 aa6.8□□□□□ -1.32
SHMT2-218ENST00000555213 MRPL55Q7Z7F7 128 aaKnown RBP6.8□□□□□ -1.32
SHMT2-218ENST00000555213 C22orf24Q9Y442 160 aa6.8□□□□□ -1.32
SHMT2-218ENST00000555213 RPL28P46779 137 aaKnown RBP6.79□□□□□ -1.32
SHMT2-218ENST00000555213 C4orf48Q5BLP8 95 aa6.79□□□□□ -1.32
SHMT2-218ENST00000555213 SMIM11BQ8TCY0 68 aa6.79□□□□□ -1.32
SHMT2-218ENST00000555213 HSPG2P98160 4391 aa6.78□□□□□ -1.32
SHMT2-218ENST00000555213 M0R378 163 aa6.78□□□□□ -1.32
SHMT2-218ENST00000555213 TRIAP1O43715 76 aa6.78□□□□□ -1.32
SHMT2-218ENST00000555213 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.33
SHMT2-218ENST00000555213 GAGE10A6NGK3 116 aa6.77□□□□□ -1.33
SHMT2-218ENST00000555213 OR13C6PQ8NH95 151 aa6.77□□□□□ -1.33
SHMT2-218ENST00000555213 TMEM126AQ9H061 195 aa6.77□□□□□ -1.33
SHMT2-218ENST00000555213 INAFM2P0DMQ5 153 aa6.76□□□□□ -1.33
SHMT2-218ENST00000555213 C1orf137Q5JT78 98 aa6.76□□□□□ -1.33
SHMT2-218ENST00000555213 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
SHMT2-218ENST00000555213 PSORS1C2Q9UIG4 136 aa6.76□□□□□ -1.33
SHMT2-218ENST00000555213 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
SHMT2-218ENST00000555213 KRTAP11-1Q8IUC1 163 aa6.75□□□□□ -1.33
SHMT2-218ENST00000555213 RPL37AP8A6NKH3 93 aa6.74□□□□□ -1.33
SHMT2-218ENST00000555213 TCL1BO95988 128 aa6.74□□□□□ -1.33
SHMT2-218ENST00000555213 FABP2P12104 132 aa6.74□□□□□ -1.33
SHMT2-218ENST00000555213 KRTAP10-4P60372 401 aaPredicted RBP6.74□□□□□ -1.33
SHMT2-218ENST00000555213 Q1RN00 199 aa6.74□□□□□ -1.33
SHMT2-218ENST00000555213 J3QL48 77 aa6.73□□□□□ -1.33
SHMT2-218ENST00000555213 K7EP34 96 aa6.73□□□□□ -1.33
SHMT2-218ENST00000555213 PSMB2P49721 201 aa6.73□□□□□ -1.33
SHMT2-218ENST00000555213 VAMP3Q15836 100 aa6.73□□□□□ -1.33
SHMT2-218ENST00000555213 S100A7L2Q5SY68 101 aa6.73□□□□□ -1.33
SHMT2-218ENST00000555213 FAM218AQ96MZ4 157 aa6.73□□□□□ -1.33
SHMT2-218ENST00000555213 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
SHMT2-218ENST00000555213 SPCS1Q9Y6A9 102 aa6.73□□□□□ -1.33
SHMT2-218ENST00000555213 HERC1Q15751 4861 aa6.72□□□□□ -1.33
SHMT2-218ENST00000555213 SCGB1C2P0DMR2 95 aa6.72□□□□□ -1.33
SHMT2-218ENST00000555213 UBE2V1Q13404 147 aa6.72□□□□□ -1.33
SHMT2-218ENST00000555213 CLEC2BQ92478 149 aa6.72□□□□□ -1.33
SHMT2-218ENST00000555213 KRTAP4-16G5E9R7 235 aaPredicted RBP6.71□□□□□ -1.34
SHMT2-218ENST00000555213 IGLV7-43P04211 117 aa6.71□□□□□ -1.34
SHMT2-218ENST00000555213 SPRR1AP35321 89 aa6.71□□□□□ -1.34
SHMT2-218ENST00000555213 C6orf99Q4VX62 202 aa6.71□□□□□ -1.34
SHMT2-218ENST00000555213 TRAV23DV6A0A075B6W5 121 aa6.7□□□□□ -1.34
SHMT2-218ENST00000555213 BCE1O60756 84 aa6.7□□□□□ -1.34
SHMT2-218ENST00000555213 REG3GQ6UW15 175 aa6.7□□□□□ -1.34
SHMT2-218ENST00000555213 SPINK6Q6UWN8 80 aa6.7□□□□□ -1.34
SHMT2-218ENST00000555213 CBY1Q9Y3M2 126 aa6.7□□□□□ -1.34
SHMT2-218ENST00000555213 TRBV20-1A0A075B6N2 111 aa6.69□□□□□ -1.34
SHMT2-218ENST00000555213 H0YGX0 51 aa6.69□□□□□ -1.34
SHMT2-218ENST00000555213 H3BMG7 143 aa6.69□□□□□ -1.34
SHMT2-218ENST00000555213 LST1O00453 97 aa6.69□□□□□ -1.34
SHMT2-218ENST00000555213 PRYO14603 147 aa6.69□□□□□ -1.34
SHMT2-218ENST00000555213 ZNF73O43830 326 aaPredicted RBP6.69□□□□□ -1.34
SHMT2-218ENST00000555213 PRO0461Q9UI25 63 aa6.69□□□□□ -1.34
SHMT2-218ENST00000555213 TRBV7-6A0A0J9YX20 115 aa6.68□□□□□ -1.34
SHMT2-218ENST00000555213 COX6CP09669 75 aa6.68□□□□□ -1.34
SHMT2-218ENST00000555213 UBE2AP49459 152 aa6.68□□□□□ -1.34
SHMT2-218ENST00000555213 SMCPP49901 116 aaPredicted RBP6.68□□□□□ -1.34
SHMT2-218ENST00000555213 DIRC1Q969H9 104 aa6.68□□□□□ -1.34
SHMT2-218ENST00000555213 SRRM2Q9UQ35 2752 aaKnown RBP6.68□□□□□ -1.34
SHMT2-218ENST00000555213 GTF2H5Q6ZYL4 71 aa6.67□□□□□ -1.34
SHMT2-218ENST00000555213 FAT1Q14517 4588 aa6.66□□□□□ -1.34
SHMT2-218ENST00000555213 ZNF861PO60384 105 aa6.66□□□□□ -1.34
SHMT2-218ENST00000555213 ATXN8Q156A1 80 aa6.66□□□□□ -1.34
SHMT2-218ENST00000555213 LINC00575Q6W349 94 aa6.66□□□□□ -1.34
SHMT2-218ENST00000555213 FAM19A1Q7Z5A9 133 aa6.66□□□□□ -1.34
SHMT2-218ENST00000555213 ETDCA0A1B0GVM5 59 aa6.65□□□□□ -1.34
SHMT2-218ENST00000555213 B5MCH6 92 aa6.65□□□□□ -1.34
SHMT2-218ENST00000555213 ELOF1P60002 83 aaKnown RBP6.65□□□□□ -1.34
SHMT2-218ENST00000555213 LYRM7Q5U5X0 104 aa6.65□□□□□ -1.34
SHMT2-218ENST00000555213 LINC01600Q96MT4 127 aa6.65□□□□□ -1.34
SHMT2-218ENST00000555213 H0Y9J4 135 aa6.64□□□□□ -1.35
SHMT2-218ENST00000555213 TRACP01848 142 aa6.64□□□□□ -1.35
SHMT2-218ENST00000555213 COX7BP24311 80 aa6.64□□□□□ -1.35
SHMT2-218ENST00000555213 FLG2Q5D862 2391 aaPredicted RBP6.64□□□□□ -1.35
SHMT2-218ENST00000555213 OXTP01178 125 aa6.63□□□□□ -1.35
SHMT2-218ENST00000555213 PRLHP81277 87 aa6.63□□□□□ -1.35
SHMT2-218ENST00000555213 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
SHMT2-218ENST00000555213 Q9BRP9 147 aa6.63□□□□□ -1.35
SHMT2-218ENST00000555213 A0A1B0GX51 115 aa6.62□□□□□ -1.35
SHMT2-218ENST00000555213 VPS13BQ7Z7G8 4022 aa6.61□□□□□ -1.35
SHMT2-218ENST00000555213 C9JAW5 83 aa6.61□□□□□ -1.35
SHMT2-218ENST00000555213 F8W1H4 67 aa6.61□□□□□ -1.35
SHMT2-218ENST00000555213 KRTAP13-1Q8IUC0 172 aa6.61□□□□□ -1.35
SHMT2-218ENST00000555213 hADV29S1A0JD25 119 aa6.6□□□□□ -1.35
SHMT2-218ENST00000555213 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
SHMT2-218ENST00000555213 ERC2-IT1O76042 136 aa6.6□□□□□ -1.35
SHMT2-218ENST00000555213 Q6ZRX8 168 aa6.6□□□□□ -1.35
SHMT2-218ENST00000555213 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
SHMT2-218ENST00000555213 SLC25A20O43772 301 aa6.59□□□□□ -1.35
SHMT2-218ENST00000555213 SMCR5Q8TEV8 140 aa6.59□□□□□ -1.35
SHMT2-218ENST00000555213 DMBT1Q9UGM3 2413 aaPredicted RBP6.59□□□□□ -1.35
SHMT2-218ENST00000555213 BAALC-AS2P0C853 105 aa6.58□□□□□ -1.36
SHMT2-218ENST00000555213 LINC01547P58512 204 aaPredicted RBP6.58□□□□□ -1.36
SHMT2-218ENST00000555213 ZNF706Q9Y5V0 76 aaPredicted RBP6.58□□□□□ -1.36
SHMT2-218ENST00000555213 ANKRD29Q8N6D5 301 aa6.57□□□□□ -1.36
SHMT2-218ENST00000555213 UBR4Q5T4S7 5183 aa6.56□□□□□ -1.36
SHMT2-218ENST00000555213 H3BT86 120 aa6.55□□□□□ -1.36
SHMT2-218ENST00000555213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms