RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TRAV23DV6A0A075B6W5 121 aa10.1□□□□□ -0.79
SPTLC2-203ENST00000554901 IGLV7-43P04211 117 aa10.1□□□□□ -0.79
SPTLC2-203ENST00000554901 VPS13BQ7Z7G8 4022 aa10.1□□□□□ -0.79
SPTLC2-203ENST00000554901 SRRM2Q9UQ35 2752 aaKnown RBP10.1□□□□□ -0.79
SPTLC2-203ENST00000554901 A0A0B4J2C4 111 aa10.08□□□□□ -0.8
SPTLC2-203ENST00000554901 FXYD2P54710 66 aa10.08□□□□□ -0.8
SPTLC2-203ENST00000554901 CFC1BP0CG36 223 aa10.07□□□□□ -0.8
SPTLC2-203ENST00000554901 CFC1P0CG37 223 aa10.07□□□□□ -0.8
SPTLC2-203ENST00000554901 KRTAP4-16G5E9R7 235 aaPredicted RBP10.07□□□□□ -0.8
SPTLC2-203ENST00000554901 H0Y9J4 135 aa10.07□□□□□ -0.8
SPTLC2-203ENST00000554901 ZNF73O43830 326 aaPredicted RBP10.07□□□□□ -0.8
SPTLC2-203ENST00000554901 RPL28P46779 137 aaKnown RBP10.07□□□□□ -0.8
SPTLC2-203ENST00000554901 ETDCA0A1B0GVM5 59 aa10.06□□□□□ -0.8
SPTLC2-203ENST00000554901 ZNF861PO60384 105 aa10.06□□□□□ -0.8
SPTLC2-203ENST00000554901 COL5A1-AS1Q5SY13 56 aa10.06□□□□□ -0.8
SPTLC2-203ENST00000554901 RAB37Q96AX2 223 aa10.06□□□□□ -0.8
SPTLC2-203ENST00000554901 UBE2AP49459 152 aa10.05□□□□□ -0.8
SPTLC2-203ENST00000554901 HINT1P49773 126 aaPredicted RBP10.05□□□□□ -0.8
SPTLC2-203ENST00000554901 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
SPTLC2-203ENST00000554901 FAM19A1Q7Z5A9 133 aa10.05□□□□□ -0.8
SPTLC2-203ENST00000554901 KRTAP13-1Q8IUC0 172 aa10.05□□□□□ -0.8
SPTLC2-203ENST00000554901 DIRC1Q969H9 104 aa10.04□□□□□ -0.8
SPTLC2-203ENST00000554901 TRBV7-6A0A0J9YX20 115 aa10.03□□□□□ -0.8
SPTLC2-203ENST00000554901 RPL13AP40429 203 aaKnown RBP10.03□□□□□ -0.8
SPTLC2-203ENST00000554901 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
SPTLC2-203ENST00000554901 A0A1B0GWB2 263 aa10.02□□□□□ -0.8
SPTLC2-203ENST00000554901 PRO1854Q9UHT4 67 aa10.02□□□□□ -0.8
SPTLC2-203ENST00000554901 B5MCH6 92 aa10.02□□□□□ -0.81
SPTLC2-203ENST00000554901 Q6ZRX8 168 aa10.02□□□□□ -0.81
SPTLC2-203ENST00000554901 SMIM11BQ8TCY0 68 aa10.02□□□□□ -0.81
SPTLC2-203ENST00000554901 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.81
SPTLC2-203ENST00000554901 NHP2Q9NX24 153 aaKnown RBP10.02□□□□□ -0.81
SPTLC2-203ENST00000554901 C6orf99Q4VX62 202 aa10.01□□□□□ -0.81
SPTLC2-203ENST00000554901 PRLHP81277 87 aa10□□□□□ -0.81
SPTLC2-203ENST00000554901 INAFM2P0DMQ5 153 aa9.98□□□□□ -0.81
SPTLC2-203ENST00000554901 ELOF1P60002 83 aaKnown RBP9.98□□□□□ -0.81
SPTLC2-203ENST00000554901 VAMP3Q15836 100 aa9.97□□□□□ -0.81
SPTLC2-203ENST00000554901 COX7BP24311 80 aa9.97□□□□□ -0.81
SPTLC2-203ENST00000554901 BATFQ16520 125 aa9.96□□□□□ -0.82
SPTLC2-203ENST00000554901 HIGD2AQ9BW72 106 aa9.96□□□□□ -0.82
SPTLC2-203ENST00000554901 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
SPTLC2-203ENST00000554901 H7C2G1 150 aa9.94□□□□□ -0.82
SPTLC2-203ENST00000554901 Q1RN00 199 aa9.94□□□□□ -0.82
SPTLC2-203ENST00000554901 Q9BRP9 147 aa9.94□□□□□ -0.82
SPTLC2-203ENST00000554901 K7ERJ3 54 aa9.93□□□□□ -0.82
SPTLC2-203ENST00000554901 SMCR5Q8TEV8 140 aa9.93□□□□□ -0.82
SPTLC2-203ENST00000554901 ZNF706Q9Y5V0 76 aaPredicted RBP9.92□□□□□ -0.82
SPTLC2-203ENST00000554901 H0YGX0 51 aa9.9□□□□□ -0.82
SPTLC2-203ENST00000554901 SLC25A20O43772 301 aa9.89□□□□□ -0.83
SPTLC2-203ENST00000554901 TSPAN13O95857 204 aa9.89□□□□□ -0.83
SPTLC2-203ENST00000554901 FLG2Q5D862 2391 aaPredicted RBP9.88□□□□□ -0.83
SPTLC2-203ENST00000554901 COX6CP09669 75 aa9.87□□□□□ -0.83
SPTLC2-203ENST00000554901 LINC00575Q6W349 94 aa9.87□□□□□ -0.83
SPTLC2-203ENST00000554901 PKHD1L1Q86WI1 4243 aa9.87□□□□□ -0.83
SPTLC2-203ENST00000554901 ERC2-IT1O76042 136 aa9.87□□□□□ -0.83
SPTLC2-203ENST00000554901 OXTP01178 125 aa9.87□□□□□ -0.83
SPTLC2-203ENST00000554901 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
SPTLC2-203ENST00000554901 ABCA13Q86UQ4 5058 aa9.86□□□□□ -0.83
SPTLC2-203ENST00000554901 TRIAP1O43715 76 aa9.86□□□□□ -0.83
SPTLC2-203ENST00000554901 SNCGO76070 127 aa9.86□□□□□ -0.83
SPTLC2-203ENST00000554901 PSMB2P49721 201 aa9.86□□□□□ -0.83
SPTLC2-203ENST00000554901 SPRR4Q96PI1 79 aa9.86□□□□□ -0.83
SPTLC2-203ENST00000554901 FAM229BQ4G0N7 80 aa9.84□□□□□ -0.83
SPTLC2-203ENST00000554901 LINC01600Q96MT4 127 aa9.84□□□□□ -0.83
SPTLC2-203ENST00000554901 A0A1B0GX51 115 aa9.83□□□□□ -0.84
SPTLC2-203ENST00000554901 hADV29S1A0JD25 119 aa9.83□□□□□ -0.84
SPTLC2-203ENST00000554901 UBE2V1Q13404 147 aa9.83□□□□□ -0.84
SPTLC2-203ENST00000554901 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
SPTLC2-203ENST00000554901 KRTAP29-1A8MX34 341 aaPredicted RBP9.82□□□□□ -0.84
SPTLC2-203ENST00000554901 MYCBP2O75592 4640 aa9.8□□□□□ -0.84
SPTLC2-203ENST00000554901 CRYGAP11844 174 aa9.79□□□□□ -0.84
SPTLC2-203ENST00000554901 SPRR1BP22528 89 aa9.79□□□□□ -0.84
SPTLC2-203ENST00000554901 GAGE2AQ6NT46 116 aa9.79□□□□□ -0.84
SPTLC2-203ENST00000554901 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.79□□□□□ -0.84
SPTLC2-203ENST00000554901 ST20-AS1Q8NBB2 130 aa9.79□□□□□ -0.84
SPTLC2-203ENST00000554901 IGLV5-48A0A075B6I7 105 aa9.78□□□□□ -0.84
SPTLC2-203ENST00000554901 SCGB1C2P0DMR2 95 aa9.78□□□□□ -0.84
SPTLC2-203ENST00000554901 TEX49A0A1B0GTD5 131 aa9.77□□□□□ -0.84
SPTLC2-203ENST00000554901 LYRM7Q5U5X0 104 aa9.77□□□□□ -0.84
SPTLC2-203ENST00000554901 FAM218AQ96MZ4 157 aa9.77□□□□□ -0.84
SPTLC2-203ENST00000554901 OCIAD2Q56VL3 154 aa9.77□□□□□ -0.85
SPTLC2-203ENST00000554901 Q6ZQY7 126 aa9.77□□□□□ -0.85
SPTLC2-203ENST00000554901 TAX1BP3O14907 124 aa9.76□□□□□ -0.85
SPTLC2-203ENST00000554901 GHRHP01286 108 aa9.76□□□□□ -0.85
SPTLC2-203ENST00000554901 PPDPFLQ8WWR9 84 aa9.76□□□□□ -0.85
SPTLC2-203ENST00000554901 CLEC2BQ92478 149 aa9.76□□□□□ -0.85
SPTLC2-203ENST00000554901 LRP1Q07954 4544 aaKnown RBP9.76□□□□□ -0.85
SPTLC2-203ENST00000554901 C9orf118A6NHY6 69 aa9.75□□□□□ -0.85
SPTLC2-203ENST00000554901 LINC01547P58512 204 aaPredicted RBP9.75□□□□□ -0.85
SPTLC2-203ENST00000554901 PRR26Q8N8Z3 221 aa9.75□□□□□ -0.85
SPTLC2-203ENST00000554901 ANAPC11Q9NYG5 84 aa9.75□□□□□ -0.85
SPTLC2-203ENST00000554901 A0A087X002 238 aa9.74□□□□□ -0.85
SPTLC2-203ENST00000554901 KRTAP10-8P60410 259 aa9.74□□□□□ -0.85
SPTLC2-203ENST00000554901 FAT3Q8TDW7 4589 aa9.74□□□□□ -0.85
SPTLC2-203ENST00000554901 H3BUT2 72 aa9.72□□□□□ -0.85
SPTLC2-203ENST00000554901 LST1O00453 97 aa9.72□□□□□ -0.85
SPTLC2-203ENST00000554901 DNAL4O96015 105 aa9.72□□□□□ -0.85
SPTLC2-203ENST00000554901 TRACP01848 142 aa9.72□□□□□ -0.85
SPTLC2-203ENST00000554901 DEFB105AQ8NG35 78 aa9.72□□□□□ -0.85
SPTLC2-203ENST00000554901 PCLOQ9Y6V0 5065 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms