RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 CHTOPQ9Y3Y2 248 aaKnown RBP5.69□□□□□ -1.5
ACTN1-208ENST00000553370 S100A6P06703 90 aa5.68□□□□□ -1.5
ACTN1-208ENST00000553370 COA6Q5JTJ3 125 aaKnown RBP5.68□□□□□ -1.5
ACTN1-208ENST00000553370 BOD1L2Q8IYS8 172 aa5.68□□□□□ -1.5
ACTN1-208ENST00000553370 DAND5Q8N907 189 aa5.67□□□□□ -1.5
ACTN1-208ENST00000553370 Q8NDZ9 215 aa5.67□□□□□ -1.5
ACTN1-208ENST00000553370 C18orf32Q8TCD1 76 aa5.67□□□□□ -1.5
ACTN1-208ENST00000553370 SMIM13P0DJ93 91 aa5.66□□□□□ -1.5
ACTN1-208ENST00000553370 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
ACTN1-208ENST00000553370 A0A096LNJ9 63 aa5.65□□□□□ -1.5
ACTN1-208ENST00000553370 IGLV9-49A0A0B4J1Y8 123 aa5.65□□□□□ -1.5
ACTN1-208ENST00000553370 LINC01547P58512 204 aaPredicted RBP5.65□□□□□ -1.5
ACTN1-208ENST00000553370 FAM19A2Q8N3H0 131 aa5.65□□□□□ -1.5
ACTN1-208ENST00000553370 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
ACTN1-208ENST00000553370 LINC00587B1AMM8 73 aa5.64□□□□□ -1.51
ACTN1-208ENST00000553370 SPINK1P00995 79 aa5.64□□□□□ -1.51
ACTN1-208ENST00000553370 MOBPQ13875 183 aa5.64□□□□□ -1.51
ACTN1-208ENST00000553370 MIR7-3HGQ8N6C7 128 aa5.64□□□□□ -1.51
ACTN1-208ENST00000553370 SMCR5Q8TEV8 140 aa5.64□□□□□ -1.51
ACTN1-208ENST00000553370 TMEM223A0PJW6 202 aa5.63□□□□□ -1.51
ACTN1-208ENST00000553370 H0Y8G0 127 aa5.63□□□□□ -1.51
ACTN1-208ENST00000553370 HERV-K104P63124 156 aa5.63□□□□□ -1.51
ACTN1-208ENST00000553370 IFI27L1Q96BM0 104 aa5.63□□□□□ -1.51
ACTN1-208ENST00000553370 CHCHD1Q96BP2 118 aaKnown RBP5.63□□□□□ -1.51
ACTN1-208ENST00000553370 MIEN1Q9BRT3 115 aa5.63□□□□□ -1.51
ACTN1-208ENST00000553370 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
ACTN1-208ENST00000553370 TRBV10-3A0A0K0K1G6 114 aa5.62□□□□□ -1.51
ACTN1-208ENST00000553370 MYMXA0A1B0GTQ4 84 aa5.62□□□□□ -1.51
ACTN1-208ENST00000553370 C9orf153Q5TBE3 101 aa5.62□□□□□ -1.51
ACTN1-208ENST00000553370 MUC17Q685J3 4493 aa5.62□□□□□ -1.51
ACTN1-208ENST00000553370 TRAV12-1A0A0B4J245 112 aa5.61□□□□□ -1.51
ACTN1-208ENST00000553370 KRTAP13-3Q3SY46 172 aa5.61□□□□□ -1.51
ACTN1-208ENST00000553370 KCNQ1DNQ9H478 68 aa5.61□□□□□ -1.51
ACTN1-208ENST00000553370 LOC105371267A0A1B0GV96 52 aa5.6□□□□□ -1.51
ACTN1-208ENST00000553370 SERF1AO75920 110 aa5.6□□□□□ -1.51
ACTN1-208ENST00000553370 DDTP30046 118 aa5.6□□□□□ -1.51
ACTN1-208ENST00000553370 S100A7L2Q5SY68 101 aa5.6□□□□□ -1.51
ACTN1-208ENST00000553370 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
ACTN1-208ENST00000553370 HIST3H2BBQ8N257 126 aa5.6□□□□□ -1.51
ACTN1-208ENST00000553370 SLC25A20O43772 301 aa5.59□□□□□ -1.51
ACTN1-208ENST00000553370 HSBP1O75506 76 aa5.59□□□□□ -1.51
ACTN1-208ENST00000553370 S100A2P29034 98 aa5.59□□□□□ -1.51
ACTN1-208ENST00000553370 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
ACTN1-208ENST00000553370 SPRR1AP35321 89 aa5.58□□□□□ -1.52
ACTN1-208ENST00000553370 HERVK_113P61574 105 aa5.58□□□□□ -1.52
ACTN1-208ENST00000553370 JOSD1Q15040 202 aaPredicted RBP5.58□□□□□ -1.52
ACTN1-208ENST00000553370 LINC00483Q53H64 154 aa5.58□□□□□ -1.52
ACTN1-208ENST00000553370 SSBP3-AS1Q7Z2R9 100 aa5.57□□□□□ -1.52
ACTN1-208ENST00000553370 HIST1H2BLQ99880 126 aa5.57□□□□□ -1.52
ACTN1-208ENST00000553370 SPANXB1Q9NS25 103 aaPredicted RBP5.57□□□□□ -1.52
ACTN1-208ENST00000553370 LGALS3P17931 250 aaKnown RBP5.56□□□□□ -1.52
ACTN1-208ENST00000553370 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
ACTN1-208ENST00000553370 Q6ZRX8 168 aa5.56□□□□□ -1.52
ACTN1-208ENST00000553370 TRAV23DV6A0A075B6W5 121 aa5.55□□□□□ -1.52
ACTN1-208ENST00000553370 TRBV10-2A0A0K0K1G8 114 aa5.55□□□□□ -1.52
ACTN1-208ENST00000553370 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
ACTN1-208ENST00000553370 LEPROTO15243 131 aa5.55□□□□□ -1.52
ACTN1-208ENST00000553370 ERC2-IT1O76042 136 aa5.55□□□□□ -1.52
ACTN1-208ENST00000553370 FABP4P15090 132 aa5.55□□□□□ -1.52
ACTN1-208ENST00000553370 PLNP26678 52 aa5.55□□□□□ -1.52
ACTN1-208ENST00000553370 HINT1P49773 126 aaPredicted RBP5.55□□□□□ -1.52
ACTN1-208ENST00000553370 Q8N377 158 aa5.55□□□□□ -1.52
ACTN1-208ENST00000553370 HSPB8Q9UJY1 196 aa5.55□□□□□ -1.52
ACTN1-208ENST00000553370 LEPROTL1O95214 131 aa5.54□□□□□ -1.52
ACTN1-208ENST00000553370 NPC2P61916 151 aa5.54□□□□□ -1.52
ACTN1-208ENST00000553370 CBY1Q9Y3M2 126 aa5.54□□□□□ -1.52
ACTN1-208ENST00000553370 J3QQQ9 107 aa5.53□□□□□ -1.52
ACTN1-208ENST00000553370 NMUP48645 174 aa5.53□□□□□ -1.52
ACTN1-208ENST00000553370 TSPEAR-AS2P59090 65 aa5.53□□□□□ -1.52
ACTN1-208ENST00000553370 Q9BRP9 147 aa5.53□□□□□ -1.52
ACTN1-208ENST00000553370 LIMD2Q9BT23 127 aa5.53□□□□□ -1.52
ACTN1-208ENST00000553370 DPM2O94777 84 aa5.52□□□□□ -1.53
ACTN1-208ENST00000553370 ZNF73O43830 326 aaPredicted RBP5.51□□□□□ -1.53
ACTN1-208ENST00000553370 AKR1D1P51857 326 aa5.51□□□□□ -1.53
ACTN1-208ENST00000553370 SLC25A34Q6PIV7 304 aa5.51□□□□□ -1.53
ACTN1-208ENST00000553370 HRCT1Q6UXD1 115 aa5.51□□□□□ -1.53
ACTN1-208ENST00000553370 NDUFC2O95298 119 aa5.5□□□□□ -1.53
ACTN1-208ENST00000553370 IGLV6-57P01721 117 aa5.5□□□□□ -1.53
ACTN1-208ENST00000553370 IGKCP01834 107 aa5.5□□□□□ -1.53
ACTN1-208ENST00000553370 C3orf79P0CE67 100 aa5.5□□□□□ -1.53
ACTN1-208ENST00000553370 OR13C6PQ8NH95 151 aa5.5□□□□□ -1.53
ACTN1-208ENST00000553370 PMCHL2Q9BQD1 86 aa5.5□□□□□ -1.53
ACTN1-208ENST00000553370 LOC107984156A0A0G2JMH3 177 aa5.49□□□□□ -1.53
ACTN1-208ENST00000553370 SYS1-DBNDD2H3BUS1 97 aa5.49□□□□□ -1.53
ACTN1-208ENST00000553370 ARL17AQ8IVW1 177 aa5.49□□□□□ -1.53
ACTN1-208ENST00000553370 ST20-AS1Q8NBB2 130 aa5.49□□□□□ -1.53
ACTN1-208ENST00000553370 KRTAP4-1Q9BYQ7 146 aa5.49□□□□□ -1.53
ACTN1-208ENST00000553370 C9orf92A6NGG3 77 aa5.48□□□□□ -1.53
ACTN1-208ENST00000553370 SMIM6P0DI80 62 aa5.48□□□□□ -1.53
ACTN1-208ENST00000553370 KRTDAPP60985 99 aa5.48□□□□□ -1.53
ACTN1-208ENST00000553370 LAMTOR3Q9UHA4 124 aa5.48□□□□□ -1.53
ACTN1-208ENST00000553370 C20orf202A1L168 122 aa5.47□□□□□ -1.53
ACTN1-208ENST00000553370 PYY3Q5JQD4 70 aa5.47□□□□□ -1.53
ACTN1-208ENST00000553370 LINC01545Q5VT33 79 aa5.47□□□□□ -1.53
ACTN1-208ENST00000553370 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
ACTN1-208ENST00000553370 DHRS4-AS1Q9P1J3 65 aa5.47□□□□□ -1.53
ACTN1-208ENST00000553370 IGLV8-61A0A075B6I0 122 aa5.46□□□□□ -1.54
ACTN1-208ENST00000553370 PCOTHQ58A44 107 aa5.46□□□□□ -1.54
ACTN1-208ENST00000553370 LINC00518Q8N0U6 118 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms