RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 HRCT1Q6UXD1 115 aa7.67□□□□□ -1.18
CHMP1A-210ENST00000551981 LEPROTO15243 131 aa7.66□□□□□ -1.18
CHMP1A-210ENST00000551981 HINT1P49773 126 aaPredicted RBP7.66□□□□□ -1.18
CHMP1A-210ENST00000551981 CBY1Q9Y3M2 126 aa7.66□□□□□ -1.18
CHMP1A-210ENST00000551981 TSPEAR-AS2P59090 65 aa7.65□□□□□ -1.18
CHMP1A-210ENST00000551981 C10orf91Q5T1B1 145 aa7.64□□□□□ -1.19
CHMP1A-210ENST00000551981 COX6B2Q6YFQ2 88 aa7.64□□□□□ -1.19
CHMP1A-210ENST00000551981 H0Y8G0 127 aa7.63□□□□□ -1.19
CHMP1A-210ENST00000551981 SPRR1BP22528 89 aa7.63□□□□□ -1.19
CHMP1A-210ENST00000551981 NMUP48645 174 aa7.63□□□□□ -1.19
CHMP1A-210ENST00000551981 LAMTOR3Q9UHA4 124 aa7.63□□□□□ -1.19
CHMP1A-210ENST00000551981 FLGP20930 4061 aaPredicted RBP7.63□□□□□ -1.19
CHMP1A-210ENST00000551981 J3QQQ9 107 aa7.62□□□□□ -1.19
CHMP1A-210ENST00000551981 HSBP1O75506 76 aa7.61□□□□□ -1.19
CHMP1A-210ENST00000551981 PLNP26678 52 aa7.61□□□□□ -1.19
CHMP1A-210ENST00000551981 HERVK_113P61574 105 aa7.61□□□□□ -1.19
CHMP1A-210ENST00000551981 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
CHMP1A-210ENST00000551981 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
CHMP1A-210ENST00000551981 CD164Q04900 197 aa7.6□□□□□ -1.19
CHMP1A-210ENST00000551981 NPC2P61916 151 aa7.59□□□□□ -1.19
CHMP1A-210ENST00000551981 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
CHMP1A-210ENST00000551981 SOSTDC1Q6X4U4 206 aa7.57□□□□□ -1.2
CHMP1A-210ENST00000551981 PRO1933Q9H354 126 aa7.57□□□□□ -1.2
CHMP1A-210ENST00000551981 H7C2G1 150 aa7.56□□□□□ -1.2
CHMP1A-210ENST00000551981 DPM2O94777 84 aa7.56□□□□□ -1.2
CHMP1A-210ENST00000551981 LEPROTL1O95214 131 aa7.56□□□□□ -1.2
CHMP1A-210ENST00000551981 OR13C6PQ8NH95 151 aa7.56□□□□□ -1.2
CHMP1A-210ENST00000551981 ADAMTSL4-AS1Q5T5F5 129 aa7.55□□□□□ -1.2
CHMP1A-210ENST00000551981 Q5XG85 94 aa7.55□□□□□ -1.2
CHMP1A-210ENST00000551981 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
CHMP1A-210ENST00000551981 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
CHMP1A-210ENST00000551981 TAL2Q16559 108 aa7.54□□□□□ -1.2
CHMP1A-210ENST00000551981 Q1RN00 199 aa7.54□□□□□ -1.2
CHMP1A-210ENST00000551981 SPANXCQ9NY87 97 aa7.54□□□□□ -1.2
CHMP1A-210ENST00000551981 SNAPINO95295 136 aa7.53□□□□□ -1.2
CHMP1A-210ENST00000551981 IGKCP01834 107 aa7.53□□□□□ -1.2
CHMP1A-210ENST00000551981 APOC3P02656 99 aa7.53□□□□□ -1.2
CHMP1A-210ENST00000551981 C1orf195Q5TG92 126 aa7.53□□□□□ -1.2
CHMP1A-210ENST00000551981 COX7BP24311 80 aa7.52□□□□□ -1.21
CHMP1A-210ENST00000551981 AKR1D1P51857 326 aa7.52□□□□□ -1.21
CHMP1A-210ENST00000551981 SVBPQ8N300 66 aa7.52□□□□□ -1.21
CHMP1A-210ENST00000551981 DEFB105AQ8NG35 78 aa7.52□□□□□ -1.21
CHMP1A-210ENST00000551981 HSPB8Q9UJY1 196 aa7.52□□□□□ -1.21
CHMP1A-210ENST00000551981 TEX49A0A1B0GTD5 131 aa7.51□□□□□ -1.21
CHMP1A-210ENST00000551981 ELOF1P60002 83 aaKnown RBP7.51□□□□□ -1.21
CHMP1A-210ENST00000551981 NDUFA5Q16718 116 aa7.51□□□□□ -1.21
CHMP1A-210ENST00000551981 PMCHL2Q9BQD1 86 aa7.51□□□□□ -1.21
CHMP1A-210ENST00000551981 SPANXDQ9BXN6 97 aa7.51□□□□□ -1.21
CHMP1A-210ENST00000551981 LINC00308Q8TCZ7 52 aa7.5□□□□□ -1.21
CHMP1A-210ENST00000551981 KRTAP9-7A8MTY7 169 aa7.49□□□□□ -1.21
CHMP1A-210ENST00000551981 C6orf99Q4VX62 202 aa7.48□□□□□ -1.21
CHMP1A-210ENST00000551981 SMIM29Q86T20 159 aa7.48□□□□□ -1.21
CHMP1A-210ENST00000551981 YPEL4Q96NS1 127 aa7.48□□□□□ -1.21
CHMP1A-210ENST00000551981 SSPOA2VEC9 5147 aa7.47□□□□□ -1.21
CHMP1A-210ENST00000551981 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
CHMP1A-210ENST00000551981 E9PLD3 99 aa7.47□□□□□ -1.21
CHMP1A-210ENST00000551981 SERF1AO75920 110 aa7.47□□□□□ -1.21
CHMP1A-210ENST00000551981 FABP4P15090 132 aa7.47□□□□□ -1.21
CHMP1A-210ENST00000551981 USH2AO75445 5202 aa7.47□□□□□ -1.21
CHMP1A-210ENST00000551981 TCL1BO95988 128 aa7.46□□□□□ -1.22
CHMP1A-210ENST00000551981 LINC00518Q8N0U6 118 aa7.46□□□□□ -1.22
CHMP1A-210ENST00000551981 TIMM17BO60830 172 aa7.45□□□□□ -1.22
CHMP1A-210ENST00000551981 Q6Q795 121 aa7.45□□□□□ -1.22
CHMP1A-210ENST00000551981 LITAFQ99732 161 aa7.45□□□□□ -1.22
CHMP1A-210ENST00000551981 TRBV7-6A0A0J9YX20 115 aa7.44□□□□□ -1.22
CHMP1A-210ENST00000551981 LINC00310P59036 64 aa7.44□□□□□ -1.22
CHMP1A-210ENST00000551981 IGLV5-48A0A075B6I7 105 aa7.42□□□□□ -1.22
CHMP1A-210ENST00000551981 A0A0G2JQZ4 141 aa7.42□□□□□ -1.22
CHMP1A-210ENST00000551981 TRGC2P03986 189 aa7.42□□□□□ -1.22
CHMP1A-210ENST00000551981 CFC1P0CG37 223 aa7.42□□□□□ -1.22
CHMP1A-210ENST00000551981 A0A1B0GWB2 263 aa7.41□□□□□ -1.22
CHMP1A-210ENST00000551981 ATP11AUNQ6ZP68 121 aa7.4□□□□□ -1.22
CHMP1A-210ENST00000551981 ZNF815PA8K554 130 aa7.38□□□□□ -1.23
CHMP1A-210ENST00000551981 A4D1N5 150 aa7.37□□□□□ -1.23
CHMP1A-210ENST00000551981 PCP2Q8IVA1 136 aa7.37□□□□□ -1.23
CHMP1A-210ENST00000551981 NHP2Q9NX24 153 aaKnown RBP7.37□□□□□ -1.23
CHMP1A-210ENST00000551981 F8WEM9 126 aa7.36□□□□□ -1.23
CHMP1A-210ENST00000551981 COPS9Q8WXC6 57 aa7.36□□□□□ -1.23
CHMP1A-210ENST00000551981 A6NDN8 102 aa7.35□□□□□ -1.23
CHMP1A-210ENST00000551981 Q75L30 129 aa7.35□□□□□ -1.23
CHMP1A-210ENST00000551981 SYS1-DBNDD2H3BUS1 97 aa7.34□□□□□ -1.23
CHMP1A-210ENST00000551981 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
CHMP1A-210ENST00000551981 FCGBPQ9Y6R7 5405 aaPredicted RBP7.34□□□□□ -1.24
CHMP1A-210ENST00000551981 C20orf202A1L168 122 aa7.32□□□□□ -1.24
CHMP1A-210ENST00000551981 SCGB1D4Q6XE38 83 aa7.31□□□□□ -1.24
CHMP1A-210ENST00000551981 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
CHMP1A-210ENST00000551981 TTTY13Q9BZ97 58 aa7.31□□□□□ -1.24
CHMP1A-210ENST00000551981 IFITM1P13164 125 aa7.3□□□□□ -1.24
CHMP1A-210ENST00000551981 LINC01545Q5VT33 79 aa7.3□□□□□ -1.24
CHMP1A-210ENST00000551981 Q6JHZ5 121 aa7.3□□□□□ -1.24
CHMP1A-210ENST00000551981 TRBV7-7A0A0K0K1E9 115 aa7.29□□□□□ -1.24
CHMP1A-210ENST00000551981 PET117Q6UWS5 81 aa7.28□□□□□ -1.24
CHMP1A-210ENST00000551981 CLEC2BQ92478 149 aa7.28□□□□□ -1.24
CHMP1A-210ENST00000551981 TRBV20-1A0A075B6N2 111 aa7.27□□□□□ -1.25
CHMP1A-210ENST00000551981 Q6ZVH6 145 aa7.27□□□□□ -1.25
CHMP1A-210ENST00000551981 TRAV13-2A0A0B4J235 113 aa7.26□□□□□ -1.25
CHMP1A-210ENST00000551981 SLC7A5P1Q8MH63 180 aa7.26□□□□□ -1.25
CHMP1A-210ENST00000551981 Q96NJ1 140 aa7.26□□□□□ -1.25
CHMP1A-210ENST00000551981 VAMP3Q15836 100 aa7.25□□□□□ -1.25
CHMP1A-210ENST00000551981 SMIM11BQ8TCY0 68 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms