RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 SPRR1AP35321 89 aa13.08□□□□□ -0.32
NEK3-202ENST00000550841 LINC00337Q8N6G1 96 aa13.08□□□□□ -0.32
NEK3-202ENST00000550841 TRAV23DV6A0A075B6W5 121 aa13.07□□□□□ -0.32
NEK3-202ENST00000550841 A4D1N5 150 aa13.07□□□□□ -0.32
NEK3-202ENST00000550841 ETDCA0A1B0GVM5 59 aa13.06□□□□□ -0.32
NEK3-202ENST00000550841 A6NDN8 102 aa13.06□□□□□ -0.32
NEK3-202ENST00000550841 H0Y9J4 135 aa13.05□□□□□ -0.32
NEK3-202ENST00000550841 HINT1P49773 126 aaPredicted RBP13.05□□□□□ -0.32
NEK3-202ENST00000550841 KRTAP13-1Q8IUC0 172 aa13.03□□□□□ -0.32
NEK3-202ENST00000550841 ZNF73O43830 326 aaPredicted RBP13.02□□□□□ -0.33
NEK3-202ENST00000550841 CEND1Q8N111 149 aa13.02□□□□□ -0.33
NEK3-202ENST00000550841 FLG2Q5D862 2391 aaPredicted RBP13.02□□□□□ -0.33
NEK3-202ENST00000550841 KRTAP4-16G5E9R7 235 aaPredicted RBP13.01□□□□□ -0.33
NEK3-202ENST00000550841 PRLHP81277 87 aa13.01□□□□□ -0.33
NEK3-202ENST00000550841 TMEM238LA0A1B0GVL6 79 aa13□□□□□ -0.33
NEK3-202ENST00000550841 A6NJY4 79 aa13□□□□□ -0.33
NEK3-202ENST00000550841 OXTP01178 125 aa13□□□□□ -0.33
NEK3-202ENST00000550841 HSD52Q0P140 79 aa12.99□□□□□ -0.33
NEK3-202ENST00000550841 MYCBP2O75592 4640 aa12.99□□□□□ -0.33
NEK3-202ENST00000550841 B5MCH6 92 aa12.98□□□□□ -0.33
NEK3-202ENST00000550841 C12orf57Q99622 126 aa12.98□□□□□ -0.33
NEK3-202ENST00000550841 PRO1933Q9H354 126 aa12.98□□□□□ -0.33
NEK3-202ENST00000550841 PKHD1L1Q86WI1 4243 aa12.97□□□□□ -0.33
NEK3-202ENST00000550841 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
NEK3-202ENST00000550841 HIGD2AQ9BW72 106 aa12.96□□□□□ -0.33
NEK3-202ENST00000550841 Q6ZRX8 168 aa12.95□□□□□ -0.34
NEK3-202ENST00000550841 RAB37Q96AX2 223 aa12.95□□□□□ -0.34
NEK3-202ENST00000550841 CFC1BP0CG36 223 aa12.94□□□□□ -0.34
NEK3-202ENST00000550841 CFC1P0CG37 223 aa12.94□□□□□ -0.34
NEK3-202ENST00000550841 A0A0B4J2C4 111 aa12.93□□□□□ -0.34
NEK3-202ENST00000550841 TRBV7-6A0A0J9YX20 115 aa12.93□□□□□ -0.34
NEK3-202ENST00000550841 C6orf99Q4VX62 202 aa12.93□□□□□ -0.34
NEK3-202ENST00000550841 TSTD3H0UI37 97 aa12.92□□□□□ -0.34
NEK3-202ENST00000550841 SMIM11BQ8TCY0 68 aa12.92□□□□□ -0.34
NEK3-202ENST00000550841 COX7BP24311 80 aa12.91□□□□□ -0.34
NEK3-202ENST00000550841 RPL13AP40429 203 aaKnown RBP12.91□□□□□ -0.34
NEK3-202ENST00000550841 SMCR5Q8TEV8 140 aa12.91□□□□□ -0.34
NEK3-202ENST00000550841 LINC01600Q96MT4 127 aa12.91□□□□□ -0.34
NEK3-202ENST00000550841 FXYD2P54710 66 aa12.9□□□□□ -0.34
NEK3-202ENST00000550841 VAMP3Q15836 100 aa12.9□□□□□ -0.34
NEK3-202ENST00000550841 A0A1B0GWB2 263 aa12.89□□□□□ -0.35
NEK3-202ENST00000550841 ZNF706Q9Y5V0 76 aaPredicted RBP12.89□□□□□ -0.35
NEK3-202ENST00000550841 ELOF1P60002 83 aaKnown RBP12.88□□□□□ -0.35
NEK3-202ENST00000550841 DHRS4-AS1Q9P1J3 65 aa12.88□□□□□ -0.35
NEK3-202ENST00000550841 PRO1854Q9UHT4 67 aa12.87□□□□□ -0.35
NEK3-202ENST00000550841 Q9BRP9 147 aa12.86□□□□□ -0.35
NEK3-202ENST00000550841 KRTAP1-4P0C5Y4 121 aa12.85□□□□□ -0.35
NEK3-202ENST00000550841 NHP2Q9NX24 153 aaKnown RBP12.84□□□□□ -0.35
NEK3-202ENST00000550841 H7C2G1 150 aa12.83□□□□□ -0.36
NEK3-202ENST00000550841 CTAG1AP78358 180 aa12.83□□□□□ -0.36
NEK3-202ENST00000550841 M0R143 59 aa12.82□□□□□ -0.36
NEK3-202ENST00000550841 BVES-AS1Q5T3Y7 98 aa12.82□□□□□ -0.36
NEK3-202ENST00000550841 SPRR4Q96PI1 79 aa12.82□□□□□ -0.36
NEK3-202ENST00000550841 ERC2-IT1O76042 136 aa12.81□□□□□ -0.36
NEK3-202ENST00000550841 FAM229BQ4G0N7 80 aa12.81□□□□□ -0.36
NEK3-202ENST00000550841 CRYGAP11844 174 aa12.8□□□□□ -0.36
NEK3-202ENST00000550841 Q1RN00 199 aa12.8□□□□□ -0.36
NEK3-202ENST00000550841 SLC25A20O43772 301 aa12.79□□□□□ -0.36
NEK3-202ENST00000550841 KRTAP10-8P60410 259 aa12.78□□□□□ -0.36
NEK3-202ENST00000550841 PRR26Q8N8Z3 221 aa12.78□□□□□ -0.36
NEK3-202ENST00000550841 ANAPC11Q9NYG5 84 aa12.76□□□□□ -0.37
NEK3-202ENST00000550841 FAT3Q8TDW7 4589 aa12.76□□□□□ -0.37
NEK3-202ENST00000550841 H0YGX0 51 aa12.75□□□□□ -0.37
NEK3-202ENST00000550841 MT1HL1P0DM35 61 aa12.75□□□□□ -0.37
NEK3-202ENST00000550841 LRP1Q07954 4544 aaKnown RBP12.75□□□□□ -0.37
NEK3-202ENST00000550841 GAGE2AQ6NT46 116 aa12.75□□□□□ -0.37
NEK3-202ENST00000550841 SNCGO76070 127 aa12.74□□□□□ -0.37
NEK3-202ENST00000550841 LINC00575Q6W349 94 aa12.74□□□□□ -0.37
NEK3-202ENST00000550841 LINC00483Q53H64 154 aa12.73□□□□□ -0.37
NEK3-202ENST00000550841 K7ERJ3 54 aa12.72□□□□□ -0.37
NEK3-202ENST00000550841 A0A087X002 238 aa12.71□□□□□ -0.37
NEK3-202ENST00000550841 hADV29S1A0JD25 119 aa12.71□□□□□ -0.37
NEK3-202ENST00000550841 ST20-AS1Q8NBB2 130 aa12.71□□□□□ -0.37
NEK3-202ENST00000550841 TYMSOSQ8TAI1 123 aa12.7□□□□□ -0.38
NEK3-202ENST00000550841 COX6CP09669 75 aa12.69□□□□□ -0.38
NEK3-202ENST00000550841 PSMB2P49721 201 aa12.69□□□□□ -0.38
NEK3-202ENST00000550841 SPRR1BP22528 89 aa12.67□□□□□ -0.38
NEK3-202ENST00000550841 TEX49A0A1B0GTD5 131 aa12.66□□□□□ -0.38
NEK3-202ENST00000550841 TRIAP1O43715 76 aa12.66□□□□□ -0.38
NEK3-202ENST00000550841 TSPAN13O95857 204 aa12.66□□□□□ -0.38
NEK3-202ENST00000550841 KRTAP13-2Q52LG2 175 aa12.65□□□□□ -0.38
NEK3-202ENST00000550841 DEFB105AQ8NG35 78 aa12.65□□□□□ -0.38
NEK3-202ENST00000550841 A0A1B0GX51 115 aa12.64□□□□□ -0.39
NEK3-202ENST00000550841 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.63□□□□□ -0.39
NEK3-202ENST00000550841 LAMTOR3Q9UHA4 124 aa12.63□□□□□ -0.39
NEK3-202ENST00000550841 IGLV5-48A0A075B6I7 105 aa12.62□□□□□ -0.39
NEK3-202ENST00000550841 BATFQ16520 125 aa12.61□□□□□ -0.39
NEK3-202ENST00000550841 Q6ZQY7 126 aa12.61□□□□□ -0.39
NEK3-202ENST00000550841 C3orf22Q8N5N4 141 aa12.61□□□□□ -0.39
NEK3-202ENST00000550841 SCGB1C2P0DMR2 95 aa12.6□□□□□ -0.39
NEK3-202ENST00000550841 HMCN2Q8NDA2 5059 aa12.59□□□□□ -0.39
NEK3-202ENST00000550841 TNXBP22105 4242 aa12.59□□□□□ -0.39
NEK3-202ENST00000550841 OCIAD2Q56VL3 154 aa12.59□□□□□ -0.39
NEK3-202ENST00000550841 SSBP3-AS1Q7Z2R9 100 aa12.59□□□□□ -0.39
NEK3-202ENST00000550841 IGLV9-49A0A0B4J1Y8 123 aa12.58□□□□□ -0.4
NEK3-202ENST00000550841 GHRHP01286 108 aa12.58□□□□□ -0.4
NEK3-202ENST00000550841 LINC01547P58512 204 aaPredicted RBP12.58□□□□□ -0.4
NEK3-202ENST00000550841 PPDPFLQ8WWR9 84 aa12.57□□□□□ -0.4
NEK3-202ENST00000550841 FAM218AQ96MZ4 157 aa12.57□□□□□ -0.4
NEK3-202ENST00000550841 Q8N377 158 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms