RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 I3L2K1 104 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 MIFP14174 115 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 PLNP26678 52 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 FCER1GP30273 86 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 LINC00313P59037 77 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 MIC13Q5XKP0 118 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 C2orf82Q6UX34 121 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 ZNF818PQ6ZRF7 136 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 DAND5Q8N907 189 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 SLC50A1Q9BRV3 221 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 CYSTM1Q9H1C7 97 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 NDUFA4L2Q9NRX3 87 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 PRO1854Q9UHT4 67 aa3.58□□□□□ -1.84
TGFBR1-208ENST00000550253 IGKV1OR2-108A0A075B7D4 117 aa3.57□□□□□ -1.84
TGFBR1-208ENST00000550253 LINC01546A6NGU7 62 aa3.57□□□□□ -1.84
TGFBR1-208ENST00000550253 IBA57-AS1B1ANH7 110 aa3.57□□□□□ -1.84
TGFBR1-208ENST00000550253 CCKP06307 115 aa3.57□□□□□ -1.84
TGFBR1-208ENST00000550253 ARL14EPLP0DKL9 152 aa3.57□□□□□ -1.84
TGFBR1-208ENST00000550253 Q6JHZ5 121 aa3.57□□□□□ -1.84
TGFBR1-208ENST00000550253 IGKV2D-26A0A0A0MRZ7 120 aa3.56□□□□□ -1.84
TGFBR1-208ENST00000550253 TRBV30A0A0K0K1B3 111 aa3.56□□□□□ -1.84
TGFBR1-208ENST00000550253 RNASE2P10153 161 aaKnown RBP3.56□□□□□ -1.84
TGFBR1-208ENST00000550253 Q8N8P6 123 aa3.56□□□□□ -1.84
TGFBR1-208ENST00000550253 DCANP1Q8TF63 244 aa3.56□□□□□ -1.84
TGFBR1-208ENST00000550253 MRPL36Q9P0J6 103 aaKnown RBP3.56□□□□□ -1.84
TGFBR1-208ENST00000550253 VPS13BQ7Z7G8 4022 aa3.56□□□□□ -1.84
TGFBR1-208ENST00000550253 HMCN2Q8NDA2 5059 aa3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 IGLV4-60A0A075B6I1 120 aa3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 H7BZZ5 65 aa3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 M0R378 163 aa3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 INAFM2P0DMQ5 153 aa3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 CKS2P33552 79 aa3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 DEFB1P60022 68 aa3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 KLKP1Q107X0 134 aa3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 C1orf134Q5TEV5 83 aa3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 PHF5AQ7RTV0 110 aaKnown RBP3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 TMEM14BQ9NUH8 114 aa3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 SRRM2Q9UQ35 2752 aaKnown RBP3.55□□□□□ -1.84
TGFBR1-208ENST00000550253 COX6CP09669 75 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 XCL1P47992 114 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 FXYD4P59646 89 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 UBE2BP63146 152 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 SPINK9Q5DT21 86 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 SPANXN5Q5MJ07 72 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 PHLDA3Q9Y5J5 127 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 ICOSQ9Y6W8 199 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 TRAV12-1A0A0B4J245 112 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 ZNF22P17026 224 aaPredicted RBP3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 RBM3P98179 157 aaKnown RBP3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 MOBPQ13875 183 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 SS18Q15532 418 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 LCA10Q71F78 164 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 UBE2DNLQ8IWF7 75 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 TOMM6Q96B49 74 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 LINC00588Q9Y4M8 146 aa3.54□□□□□ -1.84
TGFBR1-208ENST00000550253 TRAV13-2A0A0B4J235 113 aa3.53□□□□□ -1.84
TGFBR1-208ENST00000550253 ZNF73O43830 326 aaPredicted RBP3.53□□□□□ -1.84
TGFBR1-208ENST00000550253 IGHV3-33P01772 117 aa3.53□□□□□ -1.84
TGFBR1-208ENST00000550253 PRM2P04554 102 aa3.53□□□□□ -1.84
TGFBR1-208ENST00000550253 IAPPP10997 89 aa3.53□□□□□ -1.84
TGFBR1-208ENST00000550253 HTN3P15516 51 aa3.53□□□□□ -1.84
TGFBR1-208ENST00000550253 FUSP35637 526 aaKnown RBP eCLIP3.53□□□□□ -1.84
TGFBR1-208ENST00000550253 FXYD7P58549 80 aa3.53□□□□□ -1.84
TGFBR1-208ENST00000550253 S100A7L2Q5SY68 101 aa3.53□□□□□ -1.84
TGFBR1-208ENST00000550253 DMBT1Q9UGM3 2413 aaPredicted RBP3.53□□□□□ -1.85
TGFBR1-208ENST00000550253 TRBV10-3A0A0K0K1G6 114 aa3.52□□□□□ -1.85
TGFBR1-208ENST00000550253 NBDYA0A0U1RRE5 68 aa3.52□□□□□ -1.85
TGFBR1-208ENST00000550253 IGKV1-17P01599 117 aa3.52□□□□□ -1.85
TGFBR1-208ENST00000550253 PRCDQ00LT1 54 aa3.52□□□□□ -1.85
TGFBR1-208ENST00000550253 Q1T7F1 81 aa3.52□□□□□ -1.85
TGFBR1-208ENST00000550253 LYPD5Q6UWN5 251 aa3.52□□□□□ -1.85
TGFBR1-208ENST00000550253 SMCR5Q8TEV8 140 aa3.52□□□□□ -1.85
TGFBR1-208ENST00000550253 MRPL35Q9NZE8 188 aaKnown RBP3.52□□□□□ -1.85
TGFBR1-208ENST00000550253 TIMM8BQ9Y5J9 83 aaPredicted RBP3.52□□□□□ -1.85
TGFBR1-208ENST00000550253 LRP1Q07954 4544 aaKnown RBP3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 TRAV7A0A075B6U4 112 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 A0A1B0GUT8 65 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 A6NED7 52 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 H3BQ85 93 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 TMEM256-PLSCR3K7ERE1 68 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 M0R381 172 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 LST1O00453 97 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 IGHV3-30P01768 117 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 SPART-AS1P0CW21 52 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 IGHV3-30-5P0DP03 117 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 TIMM21Q9BVV7 248 aa3.51□□□□□ -1.85
TGFBR1-208ENST00000550253 LRCOL1A6NCL2 159 aa3.5□□□□□ -1.85
TGFBR1-208ENST00000550253 F8VRH5 84 aa3.5□□□□□ -1.85
TGFBR1-208ENST00000550253 K7EMI3 77 aa3.5□□□□□ -1.85
TGFBR1-208ENST00000550253 IGKV1-5P01602 117 aa3.5□□□□□ -1.85
TGFBR1-208ENST00000550253 RHOHQ15669 191 aa3.5□□□□□ -1.85
TGFBR1-208ENST00000550253 ESRGQ1W209 222 aa3.5□□□□□ -1.85
TGFBR1-208ENST00000550253 TMEM263Q8WUH6 116 aaKnown RBP3.5□□□□□ -1.85
TGFBR1-208ENST00000550253 TTTY13Q9BZ97 58 aa3.5□□□□□ -1.85
TGFBR1-208ENST00000550253 UBE2D4Q9Y2X8 147 aa3.5□□□□□ -1.85
TGFBR1-208ENST00000550253 ZNF815PA8K554 130 aa3.49□□□□□ -1.85
TGFBR1-208ENST00000550253 A8MUN3 132 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms