RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 SEC61GP60059 68 aa11.31□□□□□ -0.6
ATXN2-219ENST00000550104 MP68P56378 58 aa11.3□□□□□ -0.6
ATXN2-219ENST00000550104 GVQW2A0A096LPI5 108 aaPredicted RBP11.29□□□□□ -0.6
ATXN2-219ENST00000550104 SMCR5Q8TEV8 140 aa11.29□□□□□ -0.6
ATXN2-219ENST00000550104 Q6ZRP5 223 aa11.28□□□□□ -0.6
ATXN2-219ENST00000550104 NDUFC1O43677 76 aa11.28□□□□□ -0.6
ATXN2-219ENST00000550104 TRAV7A0A075B6U4 112 aa11.28□□□□□ -0.6
ATXN2-219ENST00000550104 Q6ZVQ6 151 aa11.28□□□□□ -0.6
ATXN2-219ENST00000550104 C22orf24Q9Y442 160 aa11.28□□□□□ -0.6
ATXN2-219ENST00000550104 REG3GQ6UW15 175 aa11.28□□□□□ -0.6
ATXN2-219ENST00000550104 RPS28P62857 69 aaKnown RBP11.27□□□□□ -0.6
ATXN2-219ENST00000550104 IGLV6-57P01721 117 aa11.27□□□□□ -0.61
ATXN2-219ENST00000550104 BSNQ9UPA5 3926 aa11.26□□□□□ -0.61
ATXN2-219ENST00000550104 C1orf137Q5JT78 98 aa11.26□□□□□ -0.61
ATXN2-219ENST00000550104 HIVEP1P15822 2718 aa11.26□□□□□ -0.61
ATXN2-219ENST00000550104 VPREB1P12018 145 aa11.26□□□□□ -0.61
ATXN2-219ENST00000550104 ELOF1P60002 83 aaKnown RBP11.25□□□□□ -0.61
ATXN2-219ENST00000550104 C9orf129Q5T035 196 aaKnown RBP11.24□□□□□ -0.61
ATXN2-219ENST00000550104 DNAH10OSP0CZ25 163 aa11.24□□□□□ -0.61
ATXN2-219ENST00000550104 LINC00167Q96N53 147 aa11.24□□□□□ -0.61
ATXN2-219ENST00000550104 PRYO14603 147 aa11.23□□□□□ -0.61
ATXN2-219ENST00000550104 PMAIP1Q13794 54 aa11.23□□□□□ -0.61
ATXN2-219ENST00000550104 NSD1Q96L73 2696 aaPredicted RBP11.23□□□□□ -0.61
ATXN2-219ENST00000550104 C15orf56Q8N910 161 aa11.23□□□□□ -0.61
ATXN2-219ENST00000550104 PSPHP1O15172 72 aa11.23□□□□□ -0.61
ATXN2-219ENST00000550104 ATP5EP56381 51 aaPredicted RBP11.23□□□□□ -0.61
ATXN2-219ENST00000550104 LINC01547P58512 204 aaPredicted RBP11.23□□□□□ -0.61
ATXN2-219ENST00000550104 NUPR2A6NF83 97 aa11.22□□□□□ -0.61
ATXN2-219ENST00000550104 K7EIL1 84 aa11.22□□□□□ -0.61
ATXN2-219ENST00000550104 H0Y9J4 135 aa11.22□□□□□ -0.61
ATXN2-219ENST00000550104 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.61
ATXN2-219ENST00000550104 PRLHP81277 87 aa11.21□□□□□ -0.61
ATXN2-219ENST00000550104 NDUFS5O43920 106 aa11.21□□□□□ -0.62
ATXN2-219ENST00000550104 NDUFB1O75438 58 aa11.2□□□□□ -0.62
ATXN2-219ENST00000550104 Q6ZQT0 140 aa11.2□□□□□ -0.62
ATXN2-219ENST00000550104 FAM168BA1KXE4 195 aa11.18□□□□□ -0.62
ATXN2-219ENST00000550104 CHKB-CPT1BH3BT56 60 aa11.18□□□□□ -0.62
ATXN2-219ENST00000550104 SERTAD4-AS1Q5TG53 156 aa11.18□□□□□ -0.62
ATXN2-219ENST00000550104 Q8N9L7 120 aa11.17□□□□□ -0.62
ATXN2-219ENST00000550104 NBEAL1Q6ZS30 2694 aa11.17□□□□□ -0.62
ATXN2-219ENST00000550104 FAM30AQ9NZY2 134 aa11.17□□□□□ -0.62
ATXN2-219ENST00000550104 LY6G6CO95867 125 aa11.16□□□□□ -0.62
ATXN2-219ENST00000550104 A6NED7 52 aa11.15□□□□□ -0.62
ATXN2-219ENST00000550104 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
ATXN2-219ENST00000550104 WFDC13Q8IUB5 93 aa11.14□□□□□ -0.63
ATXN2-219ENST00000550104 WIPF1O43516 503 aa11.14□□□□□ -0.63
ATXN2-219ENST00000550104 MDFIQ99750 246 aa11.13□□□□□ -0.63
ATXN2-219ENST00000550104 LOC110117498A0A087WWA1 95 aa11.13□□□□□ -0.63
ATXN2-219ENST00000550104 IGLV9-49A0A0B4J1Y8 123 aa11.13□□□□□ -0.63
ATXN2-219ENST00000550104 Q6ZRX8 168 aa11.12□□□□□ -0.63
ATXN2-219ENST00000550104 ST20-AS1Q8NBB2 130 aa11.12□□□□□ -0.63
ATXN2-219ENST00000550104 LINC01600Q96MT4 127 aa11.12□□□□□ -0.63
ATXN2-219ENST00000550104 TMEM254Q8TBM7 123 aa11.11□□□□□ -0.63
ATXN2-219ENST00000550104 NIPBLQ6KC79 2804 aaeCLIP11.11□□□□□ -0.63
ATXN2-219ENST00000550104 CASC10Q5T4H9 136 aa11.11□□□□□ -0.63
ATXN2-219ENST00000550104 LINC00336Q6ZUF6 198 aa11.11□□□□□ -0.63
ATXN2-219ENST00000550104 Q9BRP9 147 aa11.1□□□□□ -0.63
ATXN2-219ENST00000550104 DEFB116Q30KQ4 102 aa11.1□□□□□ -0.63
ATXN2-219ENST00000550104 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
ATXN2-219ENST00000550104 A0A087WSZ3 146 aa11.09□□□□□ -0.63
ATXN2-219ENST00000550104 CXCL6P80162 114 aa11.08□□□□□ -0.63
ATXN2-219ENST00000550104 TM2D3Q9BRN9 247 aa11.08□□□□□ -0.64
ATXN2-219ENST00000550104 CHTF8P0CG12 524 aa11.07□□□□□ -0.64
ATXN2-219ENST00000550104 Q8NDZ9 215 aa11.07□□□□□ -0.64
ATXN2-219ENST00000550104 BAHCC1Q9P281 2608 aa11.06□□□□□ -0.64
ATXN2-219ENST00000550104 KCNQ1DNQ9H478 68 aa11.06□□□□□ -0.64
ATXN2-219ENST00000550104 PHF5AQ7RTV0 110 aaKnown RBP11.05□□□□□ -0.64
ATXN2-219ENST00000550104 C16orf90A8MZG2 172 aa11.03□□□□□ -0.64
ATXN2-219ENST00000550104 IGLV1-50A0A075B6I6 118 aa11.02□□□□□ -0.64
ATXN2-219ENST00000550104 NBDYA0A0U1RRE5 68 aa11.02□□□□□ -0.65
ATXN2-219ENST00000550104 PRR15LQ9BU68 103 aa11.01□□□□□ -0.65
ATXN2-219ENST00000550104 IGLV5-52A0A0A0MRZ9 124 aa11□□□□□ -0.65
ATXN2-219ENST00000550104 TENM4Q6N022 2769 aa11□□□□□ -0.65
ATXN2-219ENST00000550104 SPINK6Q6UWN8 80 aa10.99□□□□□ -0.65
ATXN2-219ENST00000550104 OBSCN-AS1Q96MR7 158 aa10.99□□□□□ -0.65
ATXN2-219ENST00000550104 ZNF706Q9Y5V0 76 aaPredicted RBP10.99□□□□□ -0.65
ATXN2-219ENST00000550104 Q8NBF4 154 aa10.97□□□□□ -0.65
ATXN2-219ENST00000550104 LINC00476Q8WZB0 136 aa10.97□□□□□ -0.65
ATXN2-219ENST00000550104 CUBNO60494 3623 aa10.96□□□□□ -0.65
ATXN2-219ENST00000550104 CSMD2Q7Z408 3487 aa10.96□□□□□ -0.65
ATXN2-219ENST00000550104 C1orf134Q5TEV5 83 aa10.96□□□□□ -0.65
ATXN2-219ENST00000550104 Q8N377 158 aa10.96□□□□□ -0.65
ATXN2-219ENST00000550104 TLX1NBP0CAT3 122 aa10.95□□□□□ -0.66
ATXN2-219ENST00000550104 TRBV7-4A0A0J9YYF1 115 aa10.95□□□□□ -0.66
ATXN2-219ENST00000550104 LINC00208Q96KT6 92 aa10.95□□□□□ -0.66
ATXN2-219ENST00000550104 EPM2AB3EWF7 344 aa10.95□□□□□ -0.66
ATXN2-219ENST00000550104 IGKV4-1P06312 121 aa10.94□□□□□ -0.66
ATXN2-219ENST00000550104 SMIM29Q86T20 159 aa10.92□□□□□ -0.66
ATXN2-219ENST00000550104 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
ATXN2-219ENST00000550104 ERC2-IT1O76042 136 aa10.89□□□□□ -0.67
ATXN2-219ENST00000550104 A0A0G2JQZ4 141 aa10.89□□□□□ -0.67
ATXN2-219ENST00000550104 A0A1W2PNN7 141 aa10.89□□□□□ -0.67
ATXN2-219ENST00000550104 PLA2G2DQ9UNK4 145 aa10.89□□□□□ -0.67
ATXN2-219ENST00000550104 HCG22E2RYF7 251 aa10.88□□□□□ -0.67
ATXN2-219ENST00000550104 CASC2Q6XLA1 102 aa10.87□□□□□ -0.67
ATXN2-219ENST00000550104 APLNQ9ULZ1 77 aa10.86□□□□□ -0.67
ATXN2-219ENST00000550104 CIRBP-AS1Q8TBR5 109 aa10.86□□□□□ -0.67
ATXN2-219ENST00000550104 KRTAP26-1Q6PEX3 210 aa10.86□□□□□ -0.67
ATXN2-219ENST00000550104 A0A1B0GW54 56 aa10.85□□□□□ -0.67
ATXN2-219ENST00000550104 RTL8CO15255 209 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms