RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 IGLV6-57P01721 117 aa11.3□□□□□ -0.6
SSH1-207ENST00000547862 JOSD1Q15040 202 aaPredicted RBP11.3□□□□□ -0.6
SSH1-207ENST00000547862 ST20-AS1Q8NBB2 130 aa11.3□□□□□ -0.6
SSH1-207ENST00000547862 IGKCP01834 107 aa11.29□□□□□ -0.6
SSH1-207ENST00000547862 NMUP48645 174 aa11.29□□□□□ -0.6
SSH1-207ENST00000547862 SOSTDC1Q6X4U4 206 aa11.29□□□□□ -0.6
SSH1-207ENST00000547862 NDUFC2O95298 119 aa11.28□□□□□ -0.6
SSH1-207ENST00000547862 XP32Q5T750 250 aa11.28□□□□□ -0.6
SSH1-207ENST00000547862 HSPB8Q9UJY1 196 aa11.28□□□□□ -0.6
SSH1-207ENST00000547862 ZNF73O43830 326 aaPredicted RBP11.27□□□□□ -0.61
SSH1-207ENST00000547862 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.61
SSH1-207ENST00000547862 HRCT1Q6UXD1 115 aa11.25□□□□□ -0.61
SSH1-207ENST00000547862 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
SSH1-207ENST00000547862 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
SSH1-207ENST00000547862 OR13C6PQ8NH95 151 aa11.22□□□□□ -0.61
SSH1-207ENST00000547862 HINT1P49773 126 aaPredicted RBP11.21□□□□□ -0.61
SSH1-207ENST00000547862 C9orf92A6NGG3 77 aa11.19□□□□□ -0.62
SSH1-207ENST00000547862 LIMD2Q9BT23 127 aa11.18□□□□□ -0.62
SSH1-207ENST00000547862 E9PLD3 99 aa11.17□□□□□ -0.62
SSH1-207ENST00000547862 CBY1Q9Y3M2 126 aa11.16□□□□□ -0.62
SSH1-207ENST00000547862 PCOTHQ58A44 107 aa11.15□□□□□ -0.62
SSH1-207ENST00000547862 LCE2DQ5TA82 110 aaPredicted RBP11.14□□□□□ -0.63
SSH1-207ENST00000547862 LINC00308Q8TCZ7 52 aa11.14□□□□□ -0.63
SSH1-207ENST00000547862 SPANXCQ9NY87 97 aa11.14□□□□□ -0.63
SSH1-207ENST00000547862 SLC25A34Q6PIV7 304 aa11.13□□□□□ -0.63
SSH1-207ENST00000547862 Q1RN00 199 aa11.12□□□□□ -0.63
SSH1-207ENST00000547862 LITAFQ99732 161 aa11.12□□□□□ -0.63
SSH1-207ENST00000547862 DHRS4-AS1Q9P1J3 65 aa11.12□□□□□ -0.63
SSH1-207ENST00000547862 LAMTOR3Q9UHA4 124 aa11.12□□□□□ -0.63
SSH1-207ENST00000547862 IGLV8-61A0A075B6I0 122 aa11.11□□□□□ -0.63
SSH1-207ENST00000547862 C5orf52A6NGY3 159 aa11.11□□□□□ -0.63
SSH1-207ENST00000547862 LCE2CQ5TA81 110 aa11.11□□□□□ -0.63
SSH1-207ENST00000547862 DEFB105AQ8NG35 78 aa11.11□□□□□ -0.63
SSH1-207ENST00000547862 SPRR1BP22528 89 aa11.1□□□□□ -0.63
SSH1-207ENST00000547862 H7C2G1 150 aa11.09□□□□□ -0.63
SSH1-207ENST00000547862 COX7BP24311 80 aa11.09□□□□□ -0.63
SSH1-207ENST00000547862 SPANXDQ9BXN6 97 aa11.09□□□□□ -0.63
SSH1-207ENST00000547862 ZNF815PA8K554 130 aa11.08□□□□□ -0.64
SSH1-207ENST00000547862 C6orf99Q4VX62 202 aa11.08□□□□□ -0.64
SSH1-207ENST00000547862 TTTY13Q9BZ97 58 aa11.08□□□□□ -0.64
SSH1-207ENST00000547862 SYS1-DBNDD2H3BUS1 97 aa11.07□□□□□ -0.64
SSH1-207ENST00000547862 ELOF1P60002 83 aaKnown RBP11.07□□□□□ -0.64
SSH1-207ENST00000547862 TAL2Q16559 108 aa11.07□□□□□ -0.64
SSH1-207ENST00000547862 TIMM17BO60830 172 aa11.06□□□□□ -0.64
SSH1-207ENST00000547862 COLCA2A8K830 154 aa11.05□□□□□ -0.64
SSH1-207ENST00000547862 KRTAP19-2Q3LHN2 52 aa11.05□□□□□ -0.64
SSH1-207ENST00000547862 MT1HP80294 61 aa11.04□□□□□ -0.64
SSH1-207ENST00000547862 CRCT1Q9UGL9 99 aa11.04□□□□□ -0.64
SSH1-207ENST00000547862 PRO1933Q9H354 126 aa11.02□□□□□ -0.65
SSH1-207ENST00000547862 LINC01545Q5VT33 79 aa11.01□□□□□ -0.65
SSH1-207ENST00000547862 A0A0G2JQZ4 141 aa11□□□□□ -0.65
SSH1-207ENST00000547862 SLC7A5P1Q8MH63 180 aa11□□□□□ -0.65
SSH1-207ENST00000547862 FSIP2Q5CZC0 6907 aa11□□□□□ -0.65
SSH1-207ENST00000547862 LINC00518Q8N0U6 118 aa10.99□□□□□ -0.65
SSH1-207ENST00000547862 TEX49A0A1B0GTD5 131 aa10.98□□□□□ -0.65
SSH1-207ENST00000547862 CD164Q04900 197 aa10.98□□□□□ -0.65
SSH1-207ENST00000547862 SCGB1D4Q6XE38 83 aa10.97□□□□□ -0.65
SSH1-207ENST00000547862 HIST1H2BKO60814 126 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 HIST1H2BJP06899 126 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 HIST1H2BOP23527 126 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 HIST1H2BBP33778 126 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 HIST1H2BDP58876 126 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 HIST1H2BCP62807 126 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 HIST2H2BEQ16778 126 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.96□□□□□ -0.65
SSH1-207ENST00000547862 PET117Q6UWS5 81 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 HIST1H2BHQ93079 126 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 HIST1H2BNQ99877 126 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 HIST1H2BMQ99879 126 aa10.96□□□□□ -0.65
SSH1-207ENST00000547862 CFC1BP0CG36 223 aa10.95□□□□□ -0.66
SSH1-207ENST00000547862 AKR1D1P51857 326 aa10.94□□□□□ -0.66
SSH1-207ENST00000547862 SMIM29Q86T20 159 aa10.94□□□□□ -0.66
SSH1-207ENST00000547862 A0A1B0GWB2 263 aa10.93□□□□□ -0.66
SSH1-207ENST00000547862 A6NDN8 102 aa10.93□□□□□ -0.66
SSH1-207ENST00000547862 C3orf79P0CE67 100 aa10.93□□□□□ -0.66
SSH1-207ENST00000547862 C1orf195Q5TG92 126 aa10.93□□□□□ -0.66
SSH1-207ENST00000547862 KRTDAPP60985 99 aa10.92□□□□□ -0.66
SSH1-207ENST00000547862 TRBV7-6A0A0J9YX20 115 aa10.9□□□□□ -0.66
SSH1-207ENST00000547862 M0R2T5 61 aa10.89□□□□□ -0.67
SSH1-207ENST00000547862 RPL37P61927 97 aaKnown RBP10.89□□□□□ -0.67
SSH1-207ENST00000547862 COX6B2Q6YFQ2 88 aa10.89□□□□□ -0.67
SSH1-207ENST00000547862 IGLV5-48A0A075B6I7 105 aa10.88□□□□□ -0.67
SSH1-207ENST00000547862 ANKRD39Q53RE8 183 aa10.88□□□□□ -0.67
SSH1-207ENST00000547862 KRTAP10-6P60371 365 aaPredicted RBP10.87□□□□□ -0.67
SSH1-207ENST00000547862 Q5XG85 94 aa10.87□□□□□ -0.67
SSH1-207ENST00000547862 ATOH7Q8N100 152 aa10.87□□□□□ -0.67
SSH1-207ENST00000547862 COPS9Q8WXC6 57 aa10.87□□□□□ -0.67
SSH1-207ENST00000547862 LORP23490 312 aaPredicted RBP10.85□□□□□ -0.67
SSH1-207ENST00000547862 MUSTN1Q8IVN3 82 aa10.85□□□□□ -0.67
SSH1-207ENST00000547862 IFITM1P13164 125 aa10.84□□□□□ -0.67
SSH1-207ENST00000547862 C20orf202A1L168 122 aa10.83□□□□□ -0.68
SSH1-207ENST00000547862 F8WEM9 126 aa10.82□□□□□ -0.68
SSH1-207ENST00000547862 PCP2Q8IVA1 136 aa10.82□□□□□ -0.68
SSH1-207ENST00000547862 SMIM11BQ8TCY0 68 aa10.82□□□□□ -0.68
SSH1-207ENST00000547862 NHP2Q9NX24 153 aaKnown RBP10.82□□□□□ -0.68
SSH1-207ENST00000547862 TCL1BO95988 128 aa10.81□□□□□ -0.68
SSH1-207ENST00000547862 A4D1N5 150 aa10.8□□□□□ -0.68
SSH1-207ENST00000547862 FLGP20930 4061 aaPredicted RBP10.79□□□□□ -0.68
SSH1-207ENST00000547862 TRAV13-2A0A0B4J235 113 aa10.78□□□□□ -0.68
SSH1-207ENST00000547862 Q6ZVH6 145 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms