RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 SPRR4Q96PI1 79 aa13.66□□□□□ -0.22
CTDSP2-203ENST00000547701 S100A7L2Q5SY68 101 aa13.65□□□□□ -0.22
CTDSP2-203ENST00000547701 SMCR5Q8TEV8 140 aa13.65□□□□□ -0.22
CTDSP2-203ENST00000547701 ANAPC11Q9NYG5 84 aa13.65□□□□□ -0.22
CTDSP2-203ENST00000547701 NPC2P61916 151 aa13.63□□□□□ -0.23
CTDSP2-203ENST00000547701 Q6ZRX8 168 aa13.63□□□□□ -0.23
CTDSP2-203ENST00000547701 LINC00518Q8N0U6 118 aa13.63□□□□□ -0.23
CTDSP2-203ENST00000547701 IFITM1P13164 125 aa13.62□□□□□ -0.23
CTDSP2-203ENST00000547701 ATOH7Q8N100 152 aa13.62□□□□□ -0.23
CTDSP2-203ENST00000547701 COPS9Q8WXC6 57 aa13.62□□□□□ -0.23
CTDSP2-203ENST00000547701 TRAV23DV6A0A075B6W5 121 aa13.61□□□□□ -0.23
CTDSP2-203ENST00000547701 C5orf52A6NGY3 159 aa13.6□□□□□ -0.23
CTDSP2-203ENST00000547701 LINC00483Q53H64 154 aa13.6□□□□□ -0.23
CTDSP2-203ENST00000547701 SCGB1D4Q6XE38 83 aa13.6□□□□□ -0.23
CTDSP2-203ENST00000547701 ZNF73O43830 326 aaPredicted RBP13.59□□□□□ -0.23
CTDSP2-203ENST00000547701 PCP2Q8IVA1 136 aa13.59□□□□□ -0.23
CTDSP2-203ENST00000547701 JOSD1Q15040 202 aaPredicted RBP13.58□□□□□ -0.24
CTDSP2-203ENST00000547701 Q9BRP9 147 aa13.58□□□□□ -0.24
CTDSP2-203ENST00000547701 LINC00304Q8N9R0 145 aa13.54□□□□□ -0.24
CTDSP2-203ENST00000547701 UBR4Q5T4S7 5183 aa13.54□□□□□ -0.24
CTDSP2-203ENST00000547701 HSBP1L1C9JCN9 74 aa13.52□□□□□ -0.25
CTDSP2-203ENST00000547701 ERC2-IT1O76042 136 aa13.52□□□□□ -0.25
CTDSP2-203ENST00000547701 HINT1P49773 126 aaPredicted RBP13.52□□□□□ -0.25
CTDSP2-203ENST00000547701 C3orf22Q8N5N4 141 aa13.51□□□□□ -0.25
CTDSP2-203ENST00000547701 SPAG11AQ6PDA7 123 aa13.5□□□□□ -0.25
CTDSP2-203ENST00000547701 OR13C6PQ8NH95 151 aa13.49□□□□□ -0.25
CTDSP2-203ENST00000547701 TRBV7-6A0A0J9YX20 115 aa13.48□□□□□ -0.25
CTDSP2-203ENST00000547701 MUSTN1Q8IVN3 82 aa13.48□□□□□ -0.25
CTDSP2-203ENST00000547701 TSPAN13O95857 204 aa13.46□□□□□ -0.25
CTDSP2-203ENST00000547701 DHRS4-AS1Q9P1J3 65 aa13.45□□□□□ -0.26
CTDSP2-203ENST00000547701 ELOF1P60002 83 aaKnown RBP13.44□□□□□ -0.26
CTDSP2-203ENST00000547701 GAGE2AQ6NT46 116 aa13.44□□□□□ -0.26
CTDSP2-203ENST00000547701 LPAP08519 4548 aa13.43□□□□□ -0.26
CTDSP2-203ENST00000547701 SCGB1D1O95968 90 aa13.43□□□□□ -0.26
CTDSP2-203ENST00000547701 SSBP3-AS1Q7Z2R9 100 aa13.43□□□□□ -0.26
CTDSP2-203ENST00000547701 SPRR1BP22528 89 aa13.41□□□□□ -0.26
CTDSP2-203ENST00000547701 C6orf99Q4VX62 202 aa13.41□□□□□ -0.26
CTDSP2-203ENST00000547701 TRAV13-2A0A0B4J235 113 aa13.4□□□□□ -0.26
CTDSP2-203ENST00000547701 DLEU1O43261 78 aa13.4□□□□□ -0.26
CTDSP2-203ENST00000547701 PRR4Q16378 134 aa13.4□□□□□ -0.26
CTDSP2-203ENST00000547701 COX8AP10176 69 aa13.38□□□□□ -0.27
CTDSP2-203ENST00000547701 COX7BP24311 80 aa13.38□□□□□ -0.27
CTDSP2-203ENST00000547701 A0A1B0GWB2 263 aa13.37□□□□□ -0.27
CTDSP2-203ENST00000547701 RPS29P62273 56 aaKnown RBP13.37□□□□□ -0.27
CTDSP2-203ENST00000547701 Q8NBF4 154 aa13.37□□□□□ -0.27
CTDSP2-203ENST00000547701 A4D1N5 150 aa13.36□□□□□ -0.27
CTDSP2-203ENST00000547701 SPINK1P00995 79 aa13.36□□□□□ -0.27
CTDSP2-203ENST00000547701 A6NDN8 102 aa13.35□□□□□ -0.27
CTDSP2-203ENST00000547701 C4orf48Q5BLP8 95 aa13.35□□□□□ -0.27
CTDSP2-203ENST00000547701 ST20-AS1Q8NBB2 130 aa13.33□□□□□ -0.28
CTDSP2-203ENST00000547701 SLC25A34Q6PIV7 304 aa13.32□□□□□ -0.28
CTDSP2-203ENST00000547701 MOBPQ13875 183 aa13.3□□□□□ -0.28
CTDSP2-203ENST00000547701 IGLV9-49A0A0B4J1Y8 123 aa13.29□□□□□ -0.28
CTDSP2-203ENST00000547701 SMIM11BQ8TCY0 68 aa13.29□□□□□ -0.28
CTDSP2-203ENST00000547701 HIGD1BQ9P298 99 aa13.29□□□□□ -0.28
CTDSP2-203ENST00000547701 FP248Q71RG6 208 aaPredicted RBP13.28□□□□□ -0.28
CTDSP2-203ENST00000547701 TPRXLQ17RH7 258 aa13.27□□□□□ -0.29
CTDSP2-203ENST00000547701 IGLV5-48A0A075B6I7 105 aa13.25□□□□□ -0.29
CTDSP2-203ENST00000547701 NHP2Q9NX24 153 aaKnown RBP13.25□□□□□ -0.29
CTDSP2-203ENST00000547701 TEX49A0A1B0GTD5 131 aa13.24□□□□□ -0.29
CTDSP2-203ENST00000547701 HIST1H4GQ99525 98 aa13.24□□□□□ -0.29
CTDSP2-203ENST00000547701 RETNLBQ9BQ08 111 aa13.24□□□□□ -0.29
CTDSP2-203ENST00000547701 SPATA45Q537H7 98 aa13.23□□□□□ -0.29
CTDSP2-203ENST00000547701 VAMP8Q9BV40 100 aa13.23□□□□□ -0.29
CTDSP2-203ENST00000547701 LAMTOR3Q9UHA4 124 aa13.23□□□□□ -0.29
CTDSP2-203ENST00000547701 IGLV7-46A0A075B6I9 117 aa13.22□□□□□ -0.29
CTDSP2-203ENST00000547701 LINC01547P58512 204 aaPredicted RBP13.22□□□□□ -0.29
CTDSP2-203ENST00000547701 PAM16Q9Y3D7 125 aa13.22□□□□□ -0.29
CTDSP2-203ENST00000547701 VAMP3Q15836 100 aa13.21□□□□□ -0.29
CTDSP2-203ENST00000547701 C14orf144Q96I85 54 aa13.21□□□□□ -0.29
CTDSP2-203ENST00000547701 TAL2Q16559 108 aa13.2□□□□□ -0.3
CTDSP2-203ENST00000547701 C9orf153Q5TBE3 101 aa13.2□□□□□ -0.3
CTDSP2-203ENST00000547701 Q8N377 158 aa13.19□□□□□ -0.3
CTDSP2-203ENST00000547701 SMIM29Q86T20 159 aa13.18□□□□□ -0.3
CTDSP2-203ENST00000547701 RNF213Q63HN8 5207 aa13.16□□□□□ -0.3
CTDSP2-203ENST00000547701 SLC25A20O43772 301 aa13.16□□□□□ -0.3
CTDSP2-203ENST00000547701 LINC00575Q6W349 94 aa13.16□□□□□ -0.3
CTDSP2-203ENST00000547701 C2orf91Q6ZV80 131 aa13.16□□□□□ -0.3
CTDSP2-203ENST00000547701 CD164Q04900 197 aa13.15□□□□□ -0.3
CTDSP2-203ENST00000547701 PYY3Q5JQD4 70 aa13.15□□□□□ -0.3
CTDSP2-203ENST00000547701 CFC1BP0CG36 223 aa13.12□□□□□ -0.31
CTDSP2-203ENST00000547701 CFC1P0CG37 223 aa13.12□□□□□ -0.31
CTDSP2-203ENST00000547701 BVES-AS1Q5T3Y7 98 aa13.12□□□□□ -0.31
CTDSP2-203ENST00000547701 DEFB105AQ8NG35 78 aa13.12□□□□□ -0.31
CTDSP2-203ENST00000547701 A0A0B4J2C4 111 aa13.11□□□□□ -0.31
CTDSP2-203ENST00000547701 PRO1933Q9H354 126 aa13.11□□□□□ -0.31
CTDSP2-203ENST00000547701 hADV29S1A0JD25 119 aa13.09□□□□□ -0.31
CTDSP2-203ENST00000547701 Q1RN00 199 aa13.08□□□□□ -0.32
CTDSP2-203ENST00000547701 KRTAP13-3Q3SY46 172 aa13.08□□□□□ -0.32
CTDSP2-203ENST00000547701 Q5XG85 94 aa13.07□□□□□ -0.32
CTDSP2-203ENST00000547701 CEND1Q8N111 149 aa13.07□□□□□ -0.32
CTDSP2-203ENST00000547701 C12orf57Q99622 126 aa13.07□□□□□ -0.32
CTDSP2-203ENST00000547701 CDIP1Q9H305 208 aa13.07□□□□□ -0.32
CTDSP2-203ENST00000547701 LIMD2Q9BT23 127 aa13.06□□□□□ -0.32
CTDSP2-203ENST00000547701 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.05□□□□□ -0.32
CTDSP2-203ENST00000547701 PPDPFLQ8WWR9 84 aa13.05□□□□□ -0.32
CTDSP2-203ENST00000547701 TMEM238LA0A1B0GVL6 79 aa13.03□□□□□ -0.32
CTDSP2-203ENST00000547701 A6NJY4 79 aa13.03□□□□□ -0.32
CTDSP2-203ENST00000547701 Q6ZQY7 126 aa13.03□□□□□ -0.32
CTDSP2-203ENST00000547701 RAB37Q96AX2 223 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms