RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 ERC2-IT1O76042 136 aa13.61□□□□□ -0.23
SMARCC2-204ENST00000547356 PPDPFQ9H3Y8 114 aa13.61□□□□□ -0.23
SMARCC2-204ENST00000547356 TRAV23DV6A0A075B6W5 121 aa13.6□□□□□ -0.23
SMARCC2-204ENST00000547356 PRR4Q16378 134 aa13.6□□□□□ -0.23
SMARCC2-204ENST00000547356 S100A2P29034 98 aa13.59□□□□□ -0.23
SMARCC2-204ENST00000547356 PCP2Q8IVA1 136 aa13.59□□□□□ -0.23
SMARCC2-204ENST00000547356 LINC00304Q8N9R0 145 aa13.59□□□□□ -0.23
SMARCC2-204ENST00000547356 Q9BRP9 147 aa13.59□□□□□ -0.23
SMARCC2-204ENST00000547356 SPANXCQ9NY87 97 aa13.59□□□□□ -0.23
SMARCC2-204ENST00000547356 ZNF706Q9Y5V0 76 aaPredicted RBP13.59□□□□□ -0.23
SMARCC2-204ENST00000547356 SCGB1D4Q6XE38 83 aa13.58□□□□□ -0.24
SMARCC2-204ENST00000547356 Q6ZRX8 168 aa13.57□□□□□ -0.24
SMARCC2-204ENST00000547356 OR13C6PQ8NH95 151 aa13.56□□□□□ -0.24
SMARCC2-204ENST00000547356 ZNF73O43830 326 aaPredicted RBP13.55□□□□□ -0.24
SMARCC2-204ENST00000547356 S100A6P06703 90 aa13.54□□□□□ -0.24
SMARCC2-204ENST00000547356 GAGE2AQ6NT46 116 aa13.54□□□□□ -0.24
SMARCC2-204ENST00000547356 SPANXDQ9BXN6 97 aa13.54□□□□□ -0.24
SMARCC2-204ENST00000547356 RETNLBQ9BQ08 111 aa13.52□□□□□ -0.25
SMARCC2-204ENST00000547356 SNRPEP62304 92 aaKnown RBP13.51□□□□□ -0.25
SMARCC2-204ENST00000547356 LINC00483Q53H64 154 aa13.51□□□□□ -0.25
SMARCC2-204ENST00000547356 AKR1D1P51857 326 aa13.5□□□□□ -0.25
SMARCC2-204ENST00000547356 JOSD1Q15040 202 aaPredicted RBP13.46□□□□□ -0.25
SMARCC2-204ENST00000547356 MUSTN1Q8IVN3 82 aa13.46□□□□□ -0.25
SMARCC2-204ENST00000547356 ST20-AS1Q8NBB2 130 aa13.46□□□□□ -0.25
SMARCC2-204ENST00000547356 Q8NBF4 154 aa13.45□□□□□ -0.26
SMARCC2-204ENST00000547356 RNF213Q63HN8 5207 aa13.45□□□□□ -0.26
SMARCC2-204ENST00000547356 LINC00518Q8N0U6 118 aa13.44□□□□□ -0.26
SMARCC2-204ENST00000547356 IGLV9-49A0A0B4J1Y8 123 aa13.43□□□□□ -0.26
SMARCC2-204ENST00000547356 IFITM1P13164 125 aa13.43□□□□□ -0.26
SMARCC2-204ENST00000547356 CBY1Q9Y3M2 126 aa13.43□□□□□ -0.26
SMARCC2-204ENST00000547356 C5orf52A6NGY3 159 aa13.42□□□□□ -0.26
SMARCC2-204ENST00000547356 HINT1P49773 126 aaPredicted RBP13.42□□□□□ -0.26
SMARCC2-204ENST00000547356 MOBPQ13875 183 aa13.42□□□□□ -0.26
SMARCC2-204ENST00000547356 HSBP1L1C9JCN9 74 aa13.41□□□□□ -0.26
SMARCC2-204ENST00000547356 C6orf99Q4VX62 202 aa13.41□□□□□ -0.26
SMARCC2-204ENST00000547356 Q6ZVH6 145 aa13.4□□□□□ -0.26
SMARCC2-204ENST00000547356 SCGB1D1O95968 90 aa13.39□□□□□ -0.27
SMARCC2-204ENST00000547356 A6NDN8 102 aa13.38□□□□□ -0.27
SMARCC2-204ENST00000547356 SPAG11AQ6PDA7 123 aa13.38□□□□□ -0.27
SMARCC2-204ENST00000547356 COPS9Q8WXC6 57 aa13.38□□□□□ -0.27
SMARCC2-204ENST00000547356 COX7BP24311 80 aa13.37□□□□□ -0.27
SMARCC2-204ENST00000547356 ELOF1P60002 83 aaKnown RBP13.36□□□□□ -0.27
SMARCC2-204ENST00000547356 C4orf48Q5BLP8 95 aa13.36□□□□□ -0.27
SMARCC2-204ENST00000547356 DHRS4-AS1Q9P1J3 65 aa13.34□□□□□ -0.27
SMARCC2-204ENST00000547356 CTAG1AP78358 180 aa13.33□□□□□ -0.28
SMARCC2-204ENST00000547356 C9orf153Q5TBE3 101 aa13.32□□□□□ -0.28
SMARCC2-204ENST00000547356 IGLV7-46A0A075B6I9 117 aa13.3□□□□□ -0.28
SMARCC2-204ENST00000547356 SSBP3-AS1Q7Z2R9 100 aa13.3□□□□□ -0.28
SMARCC2-204ENST00000547356 SMIM11BQ8TCY0 68 aa13.28□□□□□ -0.28
SMARCC2-204ENST00000547356 TRAV13-2A0A0B4J235 113 aa13.27□□□□□ -0.29
SMARCC2-204ENST00000547356 A4D1N5 150 aa13.27□□□□□ -0.29
SMARCC2-204ENST00000547356 SPINK1P00995 79 aa13.27□□□□□ -0.29
SMARCC2-204ENST00000547356 SPRR1BP22528 89 aa13.27□□□□□ -0.29
SMARCC2-204ENST00000547356 TRBV7-6A0A0J9YX20 115 aa13.26□□□□□ -0.29
SMARCC2-204ENST00000547356 DEFB105AQ8NG35 78 aa13.26□□□□□ -0.29
SMARCC2-204ENST00000547356 A0A1B0GWB2 263 aa13.25□□□□□ -0.29
SMARCC2-204ENST00000547356 COX8AP10176 69 aa13.25□□□□□ -0.29
SMARCC2-204ENST00000547356 TAL2Q16559 108 aa13.22□□□□□ -0.29
SMARCC2-204ENST00000547356 C12orf57Q99622 126 aa13.22□□□□□ -0.29
SMARCC2-204ENST00000547356 TPRXLQ17RH7 258 aa13.21□□□□□ -0.29
SMARCC2-204ENST00000547356 C14orf144Q96I85 54 aa13.21□□□□□ -0.29
SMARCC2-204ENST00000547356 PAM16Q9Y3D7 125 aa13.21□□□□□ -0.29
SMARCC2-204ENST00000547356 Q1RN00 199 aa13.2□□□□□ -0.3
SMARCC2-204ENST00000547356 HIST1H4GQ99525 98 aa13.2□□□□□ -0.3
SMARCC2-204ENST00000547356 SPATA45Q537H7 98 aa13.19□□□□□ -0.3
SMARCC2-204ENST00000547356 Q8N377 158 aa13.19□□□□□ -0.3
SMARCC2-204ENST00000547356 LAMTOR3Q9UHA4 124 aa13.19□□□□□ -0.3
SMARCC2-204ENST00000547356 LINC01547P58512 204 aaPredicted RBP13.18□□□□□ -0.3
SMARCC2-204ENST00000547356 SLC25A34Q6PIV7 304 aa13.17□□□□□ -0.3
SMARCC2-204ENST00000547356 FP248Q71RG6 208 aaPredicted RBP13.17□□□□□ -0.3
SMARCC2-204ENST00000547356 CDIP1Q9H305 208 aa13.17□□□□□ -0.3
SMARCC2-204ENST00000547356 TEX49A0A1B0GTD5 131 aa13.16□□□□□ -0.3
SMARCC2-204ENST00000547356 DLEU1O43261 78 aa13.16□□□□□ -0.3
SMARCC2-204ENST00000547356 HRCT1Q6UXD1 115 aa13.16□□□□□ -0.3
SMARCC2-204ENST00000547356 RPS29P62273 56 aaKnown RBP13.15□□□□□ -0.3
SMARCC2-204ENST00000547356 SMIM29Q86T20 159 aa13.15□□□□□ -0.3
SMARCC2-204ENST00000547356 VAMP8Q9BV40 100 aa13.14□□□□□ -0.31
SMARCC2-204ENST00000547356 IGLV5-48A0A075B6I7 105 aa13.13□□□□□ -0.31
SMARCC2-204ENST00000547356 SLC25A20O43772 301 aa13.11□□□□□ -0.31
SMARCC2-204ENST00000547356 KRTAP13-3Q3SY46 172 aa13.1□□□□□ -0.31
SMARCC2-204ENST00000547356 C2orf91Q6ZV80 131 aa13.1□□□□□ -0.31
SMARCC2-204ENST00000547356 A0A0G2JQZ4 141 aa13.09□□□□□ -0.31
SMARCC2-204ENST00000547356 VAMP3Q15836 100 aa13.09□□□□□ -0.31
SMARCC2-204ENST00000547356 LINC00575Q6W349 94 aa13.09□□□□□ -0.31
SMARCC2-204ENST00000547356 NHP2Q9NX24 153 aaKnown RBP13.09□□□□□ -0.31
SMARCC2-204ENST00000547356 TMA7Q9Y2S6 64 aaKnown RBP13.08□□□□□ -0.32
SMARCC2-204ENST00000547356 MUC17Q685J3 4493 aa13.07□□□□□ -0.32
SMARCC2-204ENST00000547356 HIGD1BQ9P298 99 aa13.07□□□□□ -0.32
SMARCC2-204ENST00000547356 MUC2Q02817 5179 aa13.07□□□□□ -0.32
SMARCC2-204ENST00000547356 H7C2G1 150 aa13.05□□□□□ -0.32
SMARCC2-204ENST00000547356 CFC1BP0CG36 223 aa13.05□□□□□ -0.32
SMARCC2-204ENST00000547356 CFC1P0CG37 223 aa13.05□□□□□ -0.32
SMARCC2-204ENST00000547356 PYY3Q5JQD4 70 aa13.04□□□□□ -0.32
SMARCC2-204ENST00000547356 PRO1933Q9H354 126 aa13.04□□□□□ -0.32
SMARCC2-204ENST00000547356 Q6ZQY7 126 aa13.03□□□□□ -0.32
SMARCC2-204ENST00000547356 hADV29S1A0JD25 119 aa13.02□□□□□ -0.33
SMARCC2-204ENST00000547356 RAB37Q96AX2 223 aa12.99□□□□□ -0.33
SMARCC2-204ENST00000547356 LIMD2Q9BT23 127 aa12.99□□□□□ -0.33
SMARCC2-204ENST00000547356 CD164Q04900 197 aa12.97□□□□□ -0.33
SMARCC2-204ENST00000547356 CEND1Q8N111 149 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms