RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 Q6ZRX8 168 aa6.41□□□□□ -1.38
GCN1-202ENST00000547263 ANAPC11Q9NYG5 84 aa6.41□□□□□ -1.38
GCN1-202ENST00000547263 TRAV23DV6A0A075B6W5 121 aa6.4□□□□□ -1.38
GCN1-202ENST00000547263 LINC00483Q53H64 154 aa6.4□□□□□ -1.38
GCN1-202ENST00000547263 Q9BRP9 147 aa6.4□□□□□ -1.38
GCN1-202ENST00000547263 HIGD2AQ9BW72 106 aa6.4□□□□□ -1.38
GCN1-202ENST00000547263 HMCN2Q8NDA2 5059 aa6.39□□□□□ -1.39
GCN1-202ENST00000547263 ETDCA0A1B0GVM5 59 aa6.39□□□□□ -1.39
GCN1-202ENST00000547263 ZNF73O43830 326 aaPredicted RBP6.39□□□□□ -1.39
GCN1-202ENST00000547263 S100A12P80511 92 aa6.39□□□□□ -1.39
GCN1-202ENST00000547263 SCGB1D4Q6XE38 83 aa6.39□□□□□ -1.39
GCN1-202ENST00000547263 LINC00518Q8N0U6 118 aa6.39□□□□□ -1.39
GCN1-202ENST00000547263 CBY1Q9Y3M2 126 aa6.39□□□□□ -1.39
GCN1-202ENST00000547263 S100A7L2Q5SY68 101 aa6.38□□□□□ -1.39
GCN1-202ENST00000547263 TYMSOSQ8TAI1 123 aa6.38□□□□□ -1.39
GCN1-202ENST00000547263 ERC2-IT1O76042 136 aa6.37□□□□□ -1.39
GCN1-202ENST00000547263 COPS9Q8WXC6 57 aa6.37□□□□□ -1.39
GCN1-202ENST00000547263 ZNF706Q9Y5V0 76 aaPredicted RBP6.37□□□□□ -1.39
GCN1-202ENST00000547263 DLEU1O43261 78 aa6.36□□□□□ -1.39
GCN1-202ENST00000547263 MUSTN1Q8IVN3 82 aa6.36□□□□□ -1.39
GCN1-202ENST00000547263 C3orf22Q8N5N4 141 aa6.35□□□□□ -1.39
GCN1-202ENST00000547263 TRBV7-6A0A0J9YX20 115 aa6.34□□□□□ -1.39
GCN1-202ENST00000547263 HSBP1L1C9JCN9 74 aa6.34□□□□□ -1.39
GCN1-202ENST00000547263 COX8AP10176 69 aa6.34□□□□□ -1.39
GCN1-202ENST00000547263 JOSD1Q15040 202 aaPredicted RBP6.34□□□□□ -1.39
GCN1-202ENST00000547263 SCGB1D1O95968 90 aa6.33□□□□□ -1.4
GCN1-202ENST00000547263 SPRR1BP22528 89 aa6.33□□□□□ -1.4
GCN1-202ENST00000547263 ELOF1P60002 83 aaKnown RBP6.33□□□□□ -1.4
GCN1-202ENST00000547263 LINC00304Q8N9R0 145 aa6.32□□□□□ -1.4
GCN1-202ENST00000547263 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
GCN1-202ENST00000547263 OR13C6PQ8NH95 151 aa6.31□□□□□ -1.4
GCN1-202ENST00000547263 HINT1P49773 126 aaPredicted RBP6.3□□□□□ -1.4
GCN1-202ENST00000547263 DHRS4-AS1Q9P1J3 65 aa6.3□□□□□ -1.4
GCN1-202ENST00000547263 TRAV13-2A0A0B4J235 113 aa6.29□□□□□ -1.4
GCN1-202ENST00000547263 COX7BP24311 80 aa6.29□□□□□ -1.4
GCN1-202ENST00000547263 GAGE2AQ6NT46 116 aa6.29□□□□□ -1.4
GCN1-202ENST00000547263 SPAG11AQ6PDA7 123 aa6.29□□□□□ -1.4
GCN1-202ENST00000547263 SSBP3-AS1Q7Z2R9 100 aa6.29□□□□□ -1.4
GCN1-202ENST00000547263 HIGD1BQ9P298 99 aa6.29□□□□□ -1.4
GCN1-202ENST00000547263 A0A1B0GWB2 263 aa6.28□□□□□ -1.4
GCN1-202ENST00000547263 A4D1N5 150 aa6.28□□□□□ -1.4
GCN1-202ENST00000547263 TSPAN13O95857 204 aa6.27□□□□□ -1.41
GCN1-202ENST00000547263 RPS29P62273 56 aaKnown RBP6.27□□□□□ -1.41
GCN1-202ENST00000547263 PYY3Q5JQD4 70 aa6.27□□□□□ -1.41
GCN1-202ENST00000547263 C2orf91Q6ZV80 131 aa6.27□□□□□ -1.41
GCN1-202ENST00000547263 ST20-AS1Q8NBB2 130 aa6.27□□□□□ -1.41
GCN1-202ENST00000547263 SMIM11BQ8TCY0 68 aa6.27□□□□□ -1.41
GCN1-202ENST00000547263 IGLV5-48A0A075B6I7 105 aa6.26□□□□□ -1.41
GCN1-202ENST00000547263 A6NDN8 102 aa6.26□□□□□ -1.41
GCN1-202ENST00000547263 LINC01547P58512 204 aaPredicted RBP6.26□□□□□ -1.41
GCN1-202ENST00000547263 SPATA45Q537H7 98 aa6.26□□□□□ -1.41
GCN1-202ENST00000547263 Q8NBF4 154 aa6.26□□□□□ -1.41
GCN1-202ENST00000547263 PAM16Q9Y3D7 125 aa6.26□□□□□ -1.41
GCN1-202ENST00000547263 LRP2P98164 4655 aa6.25□□□□□ -1.41
GCN1-202ENST00000547263 C14orf144Q96I85 54 aa6.25□□□□□ -1.41
GCN1-202ENST00000547263 VAMP8Q9BV40 100 aa6.25□□□□□ -1.41
GCN1-202ENST00000547263 SPINK1P00995 79 aa6.24□□□□□ -1.41
GCN1-202ENST00000547263 MOBPQ13875 183 aa6.24□□□□□ -1.41
GCN1-202ENST00000547263 TAL2Q16559 108 aa6.23□□□□□ -1.41
GCN1-202ENST00000547263 SLC25A34Q6PIV7 304 aa6.23□□□□□ -1.41
GCN1-202ENST00000547263 SMIM29Q86T20 159 aa6.23□□□□□ -1.41
GCN1-202ENST00000547263 HIST1H4GQ99525 98 aa6.23□□□□□ -1.41
GCN1-202ENST00000547263 PRR4Q16378 134 aa6.22□□□□□ -1.41
GCN1-202ENST00000547263 UBR4Q5T4S7 5183 aa6.21□□□□□ -1.41
GCN1-202ENST00000547263 IGLV9-49A0A0B4J1Y8 123 aa6.21□□□□□ -1.42
GCN1-202ENST00000547263 CFC1BP0CG36 223 aa6.21□□□□□ -1.42
GCN1-202ENST00000547263 CFC1P0CG37 223 aa6.21□□□□□ -1.42
GCN1-202ENST00000547263 TPRXLQ17RH7 258 aa6.21□□□□□ -1.42
GCN1-202ENST00000547263 LINC00575Q6W349 94 aa6.21□□□□□ -1.42
GCN1-202ENST00000547263 A0A0B4J2C4 111 aa6.2□□□□□ -1.42
GCN1-202ENST00000547263 TEX49A0A1B0GTD5 131 aa6.2□□□□□ -1.42
GCN1-202ENST00000547263 Q8N377 158 aa6.2□□□□□ -1.42
GCN1-202ENST00000547263 NHP2Q9NX24 153 aaKnown RBP6.2□□□□□ -1.42
GCN1-202ENST00000547263 LPAP08519 4548 aa6.19□□□□□ -1.42
GCN1-202ENST00000547263 FP248Q71RG6 208 aaPredicted RBP6.19□□□□□ -1.42
GCN1-202ENST00000547263 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
GCN1-202ENST00000547263 C4orf48Q5BLP8 95 aa6.18□□□□□ -1.42
GCN1-202ENST00000547263 CEND1Q8N111 149 aa6.18□□□□□ -1.42
GCN1-202ENST00000547263 LAMTOR3Q9UHA4 124 aa6.18□□□□□ -1.42
GCN1-202ENST00000547263 TMA7Q9Y2S6 64 aaKnown RBP6.18□□□□□ -1.42
GCN1-202ENST00000547263 C12orf57Q99622 126 aa6.17□□□□□ -1.42
GCN1-202ENST00000547263 IGLV7-46A0A075B6I9 117 aa6.16□□□□□ -1.42
GCN1-202ENST00000547263 FXYD2P54710 66 aa6.16□□□□□ -1.42
GCN1-202ENST00000547263 CD164Q04900 197 aa6.16□□□□□ -1.42
GCN1-202ENST00000547263 VAMP3Q15836 100 aa6.16□□□□□ -1.42
GCN1-202ENST00000547263 BVES-AS1Q5T3Y7 98 aa6.16□□□□□ -1.42
GCN1-202ENST00000547263 C9orf153Q5TBE3 101 aa6.16□□□□□ -1.42
GCN1-202ENST00000547263 Q5XG85 94 aa6.15□□□□□ -1.42
GCN1-202ENST00000547263 IGLV8-61A0A075B6I0 122 aa6.14□□□□□ -1.43
GCN1-202ENST00000547263 hADV29S1A0JD25 119 aa6.14□□□□□ -1.43
GCN1-202ENST00000547263 SLC25A20O43772 301 aa6.14□□□□□ -1.43
GCN1-202ENST00000547263 Q1RN00 199 aa6.14□□□□□ -1.43
GCN1-202ENST00000547263 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.14□□□□□ -1.43
GCN1-202ENST00000547263 Q6ZQY7 126 aa6.14□□□□□ -1.43
GCN1-202ENST00000547263 TMEM238LA0A1B0GVL6 79 aa6.13□□□□□ -1.43
GCN1-202ENST00000547263 A6NJY4 79 aa6.13□□□□□ -1.43
GCN1-202ENST00000547263 HSD52Q0P140 79 aa6.13□□□□□ -1.43
GCN1-202ENST00000547263 KRTAP13-3Q3SY46 172 aa6.13□□□□□ -1.43
GCN1-202ENST00000547263 DEFB105AQ8NG35 78 aa6.13□□□□□ -1.43
GCN1-202ENST00000547263 PPDPFLQ8WWR9 84 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms