RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 S100A7L2Q5SY68 101 aa5.38□□□□□ -1.55
YBX3-218ENST00000546298 GAGE2AQ6NT46 116 aa5.38□□□□□ -1.55
YBX3-218ENST00000546298 PMCHL2Q9BQD1 86 aa5.38□□□□□ -1.55
YBX3-218ENST00000546298 PPDPFQ9H3Y8 114 aa5.38□□□□□ -1.55
YBX3-218ENST00000546298 CBY1Q9Y3M2 126 aa5.38□□□□□ -1.55
YBX3-218ENST00000546298 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
YBX3-218ENST00000546298 SPINK1P00995 79 aa5.37□□□□□ -1.55
YBX3-218ENST00000546298 JOSD1Q15040 202 aaPredicted RBP5.37□□□□□ -1.55
YBX3-218ENST00000546298 LINC00483Q53H64 154 aa5.37□□□□□ -1.55
YBX3-218ENST00000546298 FP248Q71RG6 208 aaPredicted RBP5.37□□□□□ -1.55
YBX3-218ENST00000546298 Q8NBF4 154 aa5.37□□□□□ -1.55
YBX3-218ENST00000546298 E9PLD3 99 aa5.36□□□□□ -1.55
YBX3-218ENST00000546298 IGLV6-57P01721 117 aa5.36□□□□□ -1.55
YBX3-218ENST00000546298 Q6ZRX8 168 aa5.36□□□□□ -1.55
YBX3-218ENST00000546298 SSBP3-AS1Q7Z2R9 100 aa5.36□□□□□ -1.55
YBX3-218ENST00000546298 A0A0J9YXY3 114 aa5.35□□□□□ -1.55
YBX3-218ENST00000546298 HINT1P49773 126 aaPredicted RBP5.35□□□□□ -1.55
YBX3-218ENST00000546298 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
YBX3-218ENST00000546298 TRAV23DV6A0A075B6W5 121 aa5.34□□□□□ -1.55
YBX3-218ENST00000546298 SYS1-DBNDD2H3BUS1 97 aa5.34□□□□□ -1.55
YBX3-218ENST00000546298 ZNF73O43830 326 aaPredicted RBP5.34□□□□□ -1.55
YBX3-218ENST00000546298 ERC2-IT1O76042 136 aa5.34□□□□□ -1.55
YBX3-218ENST00000546298 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
YBX3-218ENST00000546298 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
YBX3-218ENST00000546298 C5orf52A6NGY3 159 aa5.33□□□□□ -1.56
YBX3-218ENST00000546298 RPS29P62273 56 aaKnown RBP5.33□□□□□ -1.56
YBX3-218ENST00000546298 MOBPQ13875 183 aa5.33□□□□□ -1.56
YBX3-218ENST00000546298 ADAMTSL4-AS1Q5T5F5 129 aa5.33□□□□□ -1.56
YBX3-218ENST00000546298 PET117Q6UWS5 81 aa5.33□□□□□ -1.56
YBX3-218ENST00000546298 Q9BRP9 147 aa5.33□□□□□ -1.56
YBX3-218ENST00000546298 HIST1H2BKO60814 126 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 TIMM17BO60830 172 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 HIST1H2BJP06899 126 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 HIST1H2BOP23527 126 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 HIST1H2BBP33778 126 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 HIST1H2BDP58876 126 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 NPC2P61916 151 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 HIST1H2BCP62807 126 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 HIST2H2BEQ16778 126 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.32□□□□□ -1.56
YBX3-218ENST00000546298 SOSTDC1Q6X4U4 206 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 HIST1H2BHQ93079 126 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 HIST1H2BNQ99877 126 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 HIST1H2BMQ99879 126 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 SPANXCQ9NY87 97 aa5.32□□□□□ -1.56
YBX3-218ENST00000546298 LINC01545Q5VT33 79 aa5.31□□□□□ -1.56
YBX3-218ENST00000546298 LINC00518Q8N0U6 118 aa5.31□□□□□ -1.56
YBX3-218ENST00000546298 OR13C6PQ8NH95 151 aa5.31□□□□□ -1.56
YBX3-218ENST00000546298 LINC00308Q8TCZ7 52 aa5.31□□□□□ -1.56
YBX3-218ENST00000546298 ZNF815PA8K554 130 aa5.3□□□□□ -1.56
YBX3-218ENST00000546298 SLC25A20O43772 301 aa5.3□□□□□ -1.56
YBX3-218ENST00000546298 EIF4EBP3O60516 100 aaPredicted RBP5.3□□□□□ -1.56
YBX3-218ENST00000546298 SLC25A34Q6PIV7 304 aa5.3□□□□□ -1.56
YBX3-218ENST00000546298 LPAP08519 4548 aa5.29□□□□□ -1.56
YBX3-218ENST00000546298 KRTAP13-3Q3SY46 172 aa5.29□□□□□ -1.56
YBX3-218ENST00000546298 C9orf153Q5TBE3 101 aa5.29□□□□□ -1.56
YBX3-218ENST00000546298 LITAFQ99732 161 aa5.29□□□□□ -1.56
YBX3-218ENST00000546298 SPANXDQ9BXN6 97 aa5.29□□□□□ -1.56
YBX3-218ENST00000546298 DHRS4-AS1Q9P1J3 65 aa5.29□□□□□ -1.56
YBX3-218ENST00000546298 C20orf202A1L168 122 aa5.28□□□□□ -1.56
YBX3-218ENST00000546298 COPS9Q8WXC6 57 aa5.28□□□□□ -1.56
YBX3-218ENST00000546298 TMEM238LA0A1B0GVL6 79 aa5.27□□□□□ -1.57
YBX3-218ENST00000546298 C3orf79P0CE67 100 aa5.27□□□□□ -1.57
YBX3-218ENST00000546298 Q8N377 158 aa5.27□□□□□ -1.57
YBX3-218ENST00000546298 ST20-AS1Q8NBB2 130 aa5.27□□□□□ -1.57
YBX3-218ENST00000546298 SPRR1BP22528 89 aa5.26□□□□□ -1.57
YBX3-218ENST00000546298 COX7BP24311 80 aa5.26□□□□□ -1.57
YBX3-218ENST00000546298 AKR1D1P51857 326 aa5.26□□□□□ -1.57
YBX3-218ENST00000546298 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
YBX3-218ENST00000546298 KRTDAPP60985 99 aa5.26□□□□□ -1.57
YBX3-218ENST00000546298 COA6Q5JTJ3 125 aaKnown RBP5.26□□□□□ -1.57
YBX3-218ENST00000546298 SCGB1D4Q6XE38 83 aa5.26□□□□□ -1.57
YBX3-218ENST00000546298 LAMTOR3Q9UHA4 124 aa5.26□□□□□ -1.57
YBX3-218ENST00000546298 ASB16-AS1Q495Z4 193 aa5.25□□□□□ -1.57
YBX3-218ENST00000546298 TTTY13Q9BZ97 58 aa5.25□□□□□ -1.57
YBX3-218ENST00000546298 IFITM1P13164 125 aa5.24□□□□□ -1.57
YBX3-218ENST00000546298 ELOF1P60002 83 aaKnown RBP5.24□□□□□ -1.57
YBX3-218ENST00000546298 C6orf99Q4VX62 202 aa5.24□□□□□ -1.57
YBX3-218ENST00000546298 Q6ZVH6 145 aa5.24□□□□□ -1.57
YBX3-218ENST00000546298 TRBV7-6A0A0J9YX20 115 aa5.23□□□□□ -1.57
YBX3-218ENST00000546298 TAL2Q16559 108 aa5.23□□□□□ -1.57
YBX3-218ENST00000546298 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
YBX3-218ENST00000546298 GHRHP01286 108 aa5.22□□□□□ -1.57
YBX3-218ENST00000546298 TEX49A0A1B0GTD5 131 aa5.21□□□□□ -1.58
YBX3-218ENST00000546298 A6NDN8 102 aa5.21□□□□□ -1.58
YBX3-218ENST00000546298 SNRPEP62304 92 aaKnown RBP5.21□□□□□ -1.58
YBX3-218ENST00000546298 PRO1933Q9H354 126 aa5.21□□□□□ -1.58
YBX3-218ENST00000546298 A0A1B0GWB2 263 aa5.2□□□□□ -1.58
YBX3-218ENST00000546298 A4D1N5 150 aa5.2□□□□□ -1.58
YBX3-218ENST00000546298 CD164Q04900 197 aa5.2□□□□□ -1.58
YBX3-218ENST00000546298 ANKRD39Q53RE8 183 aa5.2□□□□□ -1.58
YBX3-218ENST00000546298 DEFB105AQ8NG35 78 aa5.2□□□□□ -1.58
YBX3-218ENST00000546298 TRAV13-2A0A0B4J235 113 aa5.19□□□□□ -1.58
YBX3-218ENST00000546298 PCP4L1A6NKN8 68 aa5.19□□□□□ -1.58
YBX3-218ENST00000546298 SMIM6P0DI80 62 aa5.19□□□□□ -1.58
YBX3-218ENST00000546298 LINC01547P58512 204 aaPredicted RBP5.19□□□□□ -1.58
YBX3-218ENST00000546298 Q1RN00 199 aa5.19□□□□□ -1.58
YBX3-218ENST00000546298 HRCT1Q6UXD1 115 aa5.19□□□□□ -1.58
YBX3-218ENST00000546298 MUSTN1Q8IVN3 82 aa5.19□□□□□ -1.58
YBX3-218ENST00000546298 ATOH7Q8N100 152 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 366 ms